RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 CSRNP3Q8WYN3 585 aa23.66■■□□□ 1.38
DDX11-221ENST00000542661 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
DDX11-221ENST00000542661 PRXQ9BXM0 1461 aa23.63■■□□□ 1.37
DDX11-221ENST00000542661 JPH4Q96JJ6 628 aa23.62■■□□□ 1.37
DDX11-221ENST00000542661 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
DDX11-221ENST00000542661 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
DDX11-221ENST00000542661 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
DDX11-221ENST00000542661 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
DDX11-221ENST00000542661 IQGAP2Q13576 1575 aa23.53■■□□□ 1.36
DDX11-221ENST00000542661 ERCC6L2Q5T890 1561 aa23.51■■□□□ 1.35
DDX11-221ENST00000542661 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
DDX11-221ENST00000542661 CARMIL2Q6F5E8 1435 aa23.43■■□□□ 1.34
DDX11-221ENST00000542661 KIF21BO75037 1637 aa23.43■■□□□ 1.34
DDX11-221ENST00000542661 UGGT2Q9NYU1 1516 aa23.41■■□□□ 1.34
DDX11-221ENST00000542661 DISP1Q96F81 1524 aa23.33■■□□□ 1.33
DDX11-221ENST00000542661 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
DDX11-221ENST00000542661 TNIKQ9UKE5 1360 aa23.32■■□□□ 1.32
DDX11-221ENST00000542661 PTPRGP23470 1445 aa23.31■■□□□ 1.32
DDX11-221ENST00000542661 KIAA0556O60303 1618 aa23.28■■□□□ 1.32
DDX11-221ENST00000542661 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
DDX11-221ENST00000542661 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
DDX11-221ENST00000542661 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
DDX11-221ENST00000542661 NPM1P06748 294 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDX11-221ENST00000542661 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
DDX11-221ENST00000542661 SAMD9Q5K651 1589 aa23.16■■□□□ 1.3
DDX11-221ENST00000542661 UACAQ9BZF9 1416 aa23.14■■□□□ 1.29
DDX11-221ENST00000542661 UHRF1BP1LA0JNW5 1464 aa23.13■■□□□ 1.29
DDX11-221ENST00000542661 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
DDX11-221ENST00000542661 RANGAP1P46060 587 aaPredicted RBP23.12■■□□□ 1.29
DDX11-221ENST00000542661 EFCAB5A4FU69 1503 aa23.12■■□□□ 1.29
DDX11-221ENST00000542661 P3H3Q8IVL6 736 aa23.1■■□□□ 1.29
DDX11-221ENST00000542661 ABCC2Q92887 1545 aa23.09■■□□□ 1.29
DDX11-221ENST00000542661 PLB1Q6P1J6 1458 aa23.04■■□□□ 1.28
DDX11-221ENST00000542661 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
DDX11-221ENST00000542661 ABCA8O94911 1581 aa23.03■■□□□ 1.28
DDX11-221ENST00000542661 FHOD3Q2V2M9 1422 aa23.01■■□□□ 1.27
DDX11-221ENST00000542661 KDM5BQ9UGL1 1544 aa23■■□□□ 1.27
DDX11-221ENST00000542661 ARHGAP35Q9NRY4 1499 aa22.96■■□□□ 1.27
DDX11-221ENST00000542661 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
DDX11-221ENST00000542661 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
DDX11-221ENST00000542661 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
DDX11-221ENST00000542661 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
DDX11-221ENST00000542661 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
DDX11-221ENST00000542661 CLIP1P30622 1438 aa22.89■■□□□ 1.25
DDX11-221ENST00000542661 FAM69CQ0P6D2 419 aa22.86■■□□□ 1.25
DDX11-221ENST00000542661 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
DDX11-221ENST00000542661 DIP2BQ9P265 1576 aa22.85■■□□□ 1.25
DDX11-221ENST00000542661 ATP10BO94823 1461 aa22.85■■□□□ 1.25
DDX11-221ENST00000542661 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
DDX11-221ENST00000542661 NUP153P49790 1475 aaKnown RBP22.84■■□□□ 1.25
DDX11-221ENST00000542661 WDR7Q9Y4E6 1490 aa22.82■■□□□ 1.24
DDX11-221ENST00000542661 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
DDX11-221ENST00000542661 CEP162Q5TB80 1403 aa22.8■■□□□ 1.24
DDX11-221ENST00000542661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
DDX11-221ENST00000542661 GLI2P10070 1586 aa22.78■■□□□ 1.24
DDX11-221ENST00000542661 HNRNPUL2Q1KMD3 747 aaKnown RBP22.78■■□□□ 1.24
DDX11-221ENST00000542661 EPRSP07814 1512 aaKnown RBP22.77■■□□□ 1.24
DDX11-221ENST00000542661 HECW1Q76N89 1606 aa22.77■■□□□ 1.24
DDX11-221ENST00000542661 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
DDX11-221ENST00000542661 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
DDX11-221ENST00000542661 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
DDX11-221ENST00000542661 PLEKHD1A6NEE1 506 aa22.7■■□□□ 1.22
DDX11-221ENST00000542661 FYCO1Q9BQS8 1478 aa22.68■■□□□ 1.22
DDX11-221ENST00000542661 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
DDX11-221ENST00000542661 PCF11O94913 1555 aaKnown RBP22.67■■□□□ 1.22
DDX11-221ENST00000542661 CDK13Q14004 1512 aaKnown RBP22.67■■□□□ 1.22
DDX11-221ENST00000542661 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
DDX11-221ENST00000542661 TSPOAP1O95153 1857 aa22.64■■□□□ 1.22
DDX11-221ENST00000542661 CCDC18Q5T9S5 1454 aa22.64■■□□□ 1.21
DDX11-221ENST00000542661 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
DDX11-221ENST00000542661 CD109Q6YHK3 1445 aa22.6■■□□□ 1.21
DDX11-221ENST00000542661 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
DDX11-221ENST00000542661 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
DDX11-221ENST00000542661 LRRIQ1Q96JM4 1722 aa22.59■■□□□ 1.21
DDX11-221ENST00000542661 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
DDX11-221ENST00000542661 MAGI3Q5TCQ9 1506 aa22.56■■□□□ 1.2
DDX11-221ENST00000542661 TROQ12816 1431 aaPredicted RBP22.53■■□□□ 1.2
DDX11-221ENST00000542661 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
DDX11-221ENST00000542661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.19
DDX11-221ENST00000542661 KDM6BO15054 1643 aa22.48■■□□□ 1.19
DDX11-221ENST00000542661 KIF14Q15058 1648 aa22.48■■□□□ 1.19
DDX11-221ENST00000542661 PHLDB1Q86UU1 1377 aa22.45■■□□□ 1.18
DDX11-221ENST00000542661 TTC37Q6PGP7 1564 aa22.44■■□□□ 1.18
DDX11-221ENST00000542661 NEO1Q92859 1461 aa22.42■■□□□ 1.18
DDX11-221ENST00000542661 MTUS2Q5JR59 1369 aa22.41■■□□□ 1.18
DDX11-221ENST00000542661 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
DDX11-221ENST00000542661 CFAP74Q9C0B2 1584 aa22.39■■□□□ 1.18
DDX11-221ENST00000542661 PLCH2O75038 1416 aa22.39■■□□□ 1.17
DDX11-221ENST00000542661 MYO5CQ9NQX4 1742 aa22.37■■□□□ 1.17
DDX11-221ENST00000542661 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
DDX11-221ENST00000542661 FANCAO15360 1455 aa22.37■■□□□ 1.17
DDX11-221ENST00000542661 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
DDX11-221ENST00000542661 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
DDX11-221ENST00000542661 MAP3K1Q13233 1512 aa22.35■■□□□ 1.17
DDX11-221ENST00000542661 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
DDX11-221ENST00000542661 EFCAB2Q5VUJ9 269 aa22.33■■□□□ 1.17
DDX11-221ENST00000542661 APLP2Q06481 763 aa22.32■■□□□ 1.16
DDX11-221ENST00000542661 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
DDX11-221ENST00000542661 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
DDX11-221ENST00000542661 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms