RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 KIAA0586Q9BVV6 1533 aa26.26■■□□□ 1.79
ECHDC2-223ENST00000542552 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
ECHDC2-223ENST00000542552 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
ECHDC2-223ENST00000542552 RAPGEF2Q9Y4G8 1499 aa26.18■■□□□ 1.78
ECHDC2-223ENST00000542552 PRXQ9BXM0 1461 aa26.1■■□□□ 1.77
ECHDC2-223ENST00000542552 IQGAP2Q13576 1575 aa26.07■■□□□ 1.76
ECHDC2-223ENST00000542552 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
ECHDC2-223ENST00000542552 EEA1Q15075 1411 aa26.01■■□□□ 1.75
ECHDC2-223ENST00000542552 CSRNP3Q8WYN3 585 aa25.99■■□□□ 1.75
ECHDC2-223ENST00000542552 UGGT2Q9NYU1 1516 aa25.96■■□□□ 1.75
ECHDC2-223ENST00000542552 CTTNBP2Q8WZ74 1663 aa25.96■■□□□ 1.75
ECHDC2-223ENST00000542552 CARMIL2Q6F5E8 1435 aa25.95■■□□□ 1.74
ECHDC2-223ENST00000542552 DISP1Q96F81 1524 aa25.93■■□□□ 1.74
ECHDC2-223ENST00000542552 TNIKQ9UKE5 1360 aa25.89■■□□□ 1.74
ECHDC2-223ENST00000542552 TRHP20396 242 aaPredicted RBP25.88■■□□□ 1.73
ECHDC2-223ENST00000542552 PTPRGP23470 1445 aa25.88■■□□□ 1.73
ECHDC2-223ENST00000542552 ADCY10Q96PN6 1610 aa25.87■■□□□ 1.73
ECHDC2-223ENST00000542552 KIAA0556O60303 1618 aa25.83■■□□□ 1.73
ECHDC2-223ENST00000542552 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
ECHDC2-223ENST00000542552 GOLGA3Q08378 1498 aa25.77■■□□□ 1.72
ECHDC2-223ENST00000542552 KIF21BO75037 1637 aa25.77■■□□□ 1.72
ECHDC2-223ENST00000542552 NPM1P06748 294 aaKnown RBP eCLIP25.74■■□□□ 1.71
ECHDC2-223ENST00000542552 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
ECHDC2-223ENST00000542552 UHRF1BP1LA0JNW5 1464 aa25.73■■□□□ 1.71
ECHDC2-223ENST00000542552 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
ECHDC2-223ENST00000542552 UACAQ9BZF9 1416 aa25.71■■□□□ 1.71
ECHDC2-223ENST00000542552 ABCC2Q92887 1545 aa25.68■■□□□ 1.7
ECHDC2-223ENST00000542552 KIF13AQ9H1H9 1805 aa25.67■■□□□ 1.7
ECHDC2-223ENST00000542552 SAMD9Q5K651 1589 aa25.65■■□□□ 1.7
ECHDC2-223ENST00000542552 ABCC10Q5T3U5 1492 aa25.63■■□□□ 1.69
ECHDC2-223ENST00000542552 KDM5BQ9UGL1 1544 aa25.6■■□□□ 1.69
ECHDC2-223ENST00000542552 ABCA8O94911 1581 aa25.59■■□□□ 1.69
ECHDC2-223ENST00000542552 PLB1Q6P1J6 1458 aa25.59■■□□□ 1.69
ECHDC2-223ENST00000542552 DIP2BQ9P265 1576 aa25.58■■□□□ 1.69
ECHDC2-223ENST00000542552 ZCCHC11Q5TAX3 1644 aaKnown RBP25.54■■□□□ 1.68
ECHDC2-223ENST00000542552 FAM69CQ0P6D2 419 aa25.53■■□□□ 1.68
ECHDC2-223ENST00000542552 P3H3Q8IVL6 736 aa25.53■■□□□ 1.68
ECHDC2-223ENST00000542552 ASXL2Q76L83 1435 aa25.53■■□□□ 1.68
ECHDC2-223ENST00000542552 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
ECHDC2-223ENST00000542552 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
ECHDC2-223ENST00000542552 RANGAP1P46060 587 aaPredicted RBP25.45■■□□□ 1.66
ECHDC2-223ENST00000542552 EHMT2Q96KQ7 1210 aa25.45■■□□□ 1.66
ECHDC2-223ENST00000542552 GLI2P10070 1586 aa25.44■■□□□ 1.66
ECHDC2-223ENST00000542552 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
ECHDC2-223ENST00000542552 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
ECHDC2-223ENST00000542552 RAPGEF6Q8TEU7 1601 aa25.39■■□□□ 1.66
ECHDC2-223ENST00000542552 WDR7Q9Y4E6 1490 aa25.37■■□□□ 1.65
ECHDC2-223ENST00000542552 ATP10BO94823 1461 aa25.36■■□□□ 1.65
ECHDC2-223ENST00000542552 TSPOAP1O95153 1857 aa25.34■■□□□ 1.65
ECHDC2-223ENST00000542552 ARHGAP35Q9NRY4 1499 aa25.33■■□□□ 1.65
ECHDC2-223ENST00000542552 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
ECHDC2-223ENST00000542552 MAP3K4Q9Y6R4 1608 aa25.3■■□□□ 1.64
ECHDC2-223ENST00000542552 PPRC1Q5VV67 1664 aaKnown RBP25.3■■□□□ 1.64
ECHDC2-223ENST00000542552 ARID3CA6NKF2 412 aa25.26■■□□□ 1.63
ECHDC2-223ENST00000542552 FMN1Q68DA7 1419 aa25.22■■□□□ 1.63
ECHDC2-223ENST00000542552 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
ECHDC2-223ENST00000542552 CFAP43Q8NDM7 1665 aa25.2■■□□□ 1.63
ECHDC2-223ENST00000542552 KDM6BO15054 1643 aa25.18■■□□□ 1.62
ECHDC2-223ENST00000542552 TEX14Q8IWB6 1497 aa25.15■■□□□ 1.62
ECHDC2-223ENST00000542552 CD109Q6YHK3 1445 aa25.15■■□□□ 1.62
ECHDC2-223ENST00000542552 MAGI3Q5TCQ9 1506 aa25.14■■□□□ 1.62
ECHDC2-223ENST00000542552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.14■■□□□ 1.62
ECHDC2-223ENST00000542552 HNRNPUL2Q1KMD3 747 aaKnown RBP25.14■■□□□ 1.62
ECHDC2-223ENST00000542552 ABCA9Q8IUA7 1624 aa25.12■■□□□ 1.61
ECHDC2-223ENST00000542552 HECW1Q76N89 1606 aa25.12■■□□□ 1.61
ECHDC2-223ENST00000542552 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
ECHDC2-223ENST00000542552 CLIP1P30622 1438 aa25.1■■□□□ 1.61
ECHDC2-223ENST00000542552 PLEKHD1A6NEE1 506 aa25.08■■□□□ 1.61
ECHDC2-223ENST00000542552 COL17A1Q9UMD9 1497 aaPredicted RBP25.07■■□□□ 1.6
ECHDC2-223ENST00000542552 CASKIN1Q8WXD9 1431 aa25.03■■□□□ 1.6
ECHDC2-223ENST00000542552 LRRIQ1Q96JM4 1722 aa25.03■■□□□ 1.6
ECHDC2-223ENST00000542552 ATP1B4Q9UN42 357 aaPredicted RBP25.02■■□□□ 1.6
ECHDC2-223ENST00000542552 PCF11O94913 1555 aaKnown RBP25.01■■□□□ 1.59
ECHDC2-223ENST00000542552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.97■■□□□ 1.59
ECHDC2-223ENST00000542552 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
ECHDC2-223ENST00000542552 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
ECHDC2-223ENST00000542552 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.58
ECHDC2-223ENST00000542552 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
ECHDC2-223ENST00000542552 ARAP3Q8WWN8 1544 aa24.94■■□□□ 1.58
ECHDC2-223ENST00000542552 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
ECHDC2-223ENST00000542552 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
ECHDC2-223ENST00000542552 CCDC18Q5T9S5 1454 aa24.93■■□□□ 1.58
ECHDC2-223ENST00000542552 NEO1Q92859 1461 aa24.92■■□□□ 1.58
ECHDC2-223ENST00000542552 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
ECHDC2-223ENST00000542552 KIF14Q15058 1648 aa24.86■■□□□ 1.57
ECHDC2-223ENST00000542552 PLCH2O75038 1416 aa24.83■■□□□ 1.57
ECHDC2-223ENST00000542552 FANCAO15360 1455 aa24.83■■□□□ 1.56
ECHDC2-223ENST00000542552 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
ECHDC2-223ENST00000542552 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
ECHDC2-223ENST00000542552 MYO5CQ9NQX4 1742 aa24.8■■□□□ 1.56
ECHDC2-223ENST00000542552 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
ECHDC2-223ENST00000542552 RAPGEF3O95398 923 aa24.76■■□□□ 1.55
ECHDC2-223ENST00000542552 RICTORQ6R327 1708 aa24.73■■□□□ 1.55
ECHDC2-223ENST00000542552 DENND4BO75064 1496 aaPredicted RBP24.72■■□□□ 1.55
ECHDC2-223ENST00000542552 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
ECHDC2-223ENST00000542552 KDM4FA0A1W2PPD8 638 aa24.7■■□□□ 1.54
ECHDC2-223ENST00000542552 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
ECHDC2-223ENST00000542552 ADGRL1O94910 1474 aa24.68■■□□□ 1.54
ECHDC2-223ENST00000542552 VPS8Q8N3P4 1428 aa24.68■■□□□ 1.54
ECHDC2-223ENST00000542552 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms