RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CLASP1Q7Z460 1538 aa37.59■■■■□ 3.61
HOMER3-205ENST00000542541 DNAJC5Q9H3Z4 198 aa37.56■■■■□ 3.6
HOMER3-205ENST00000542541 KIAA0586Q9BVV6 1533 aa37.54■■■■□ 3.6
HOMER3-205ENST00000542541 LOC105371045A0A1W2PR82 267 aa37.5■■■■□ 3.59
HOMER3-205ENST00000542541 CTTNBP2Q8WZ74 1663 aa37.4■■■■□ 3.58
HOMER3-205ENST00000542541 TNIKQ9UKE5 1360 aa37.4■■■■□ 3.58
HOMER3-205ENST00000542541 IQGAP2Q13576 1575 aa37.39■■■■□ 3.58
HOMER3-205ENST00000542541 JPH4Q96JJ6 628 aa37.37■■■■□ 3.57
HOMER3-205ENST00000542541 SHROOM2Q13796 1616 aa37.32■■■■□ 3.56
HOMER3-205ENST00000542541 RIMBP3CA6NJZ7 1639 aa37.24■■■■□ 3.55
HOMER3-205ENST00000542541 RIMBP3BA6NNM3 1639 aa37.24■■■■□ 3.55
HOMER3-205ENST00000542541 RIMBP3Q9UFD9 1639 aa37.24■■■■□ 3.55
HOMER3-205ENST00000542541 ARHGEF11O15085 1522 aa37.23■■■■□ 3.55
HOMER3-205ENST00000542541 UGGT2Q9NYU1 1516 aa37.22■■■■□ 3.55
HOMER3-205ENST00000542541 RANGAP1P46060 587 aaPredicted RBP37.21■■■■□ 3.55
HOMER3-205ENST00000542541 PRG4Q92954 1404 aaPredicted RBP37.19■■■■□ 3.54
HOMER3-205ENST00000542541 CARMIL2Q6F5E8 1435 aa37.16■■■■□ 3.54
HOMER3-205ENST00000542541 ERCC6L2Q5T890 1561 aa37.15■■■■□ 3.54
HOMER3-205ENST00000542541 DISP1Q96F81 1524 aa37.06■■■■□ 3.52
HOMER3-205ENST00000542541 CEP162Q5TB80 1403 aa37.06■■■■□ 3.52
HOMER3-205ENST00000542541 CLIP1P30622 1438 aa37.05■■■■□ 3.52
HOMER3-205ENST00000542541 EFCAB5A4FU69 1503 aa37.05■■■■□ 3.52
HOMER3-205ENST00000542541 SAMD9Q5K651 1589 aa37■■■■□ 3.51
HOMER3-205ENST00000542541 P3H3Q8IVL6 736 aa36.99■■■■□ 3.51
HOMER3-205ENST00000542541 KIAA0556O60303 1618 aa36.99■■■■□ 3.51
HOMER3-205ENST00000542541 ARAP1Q96P48 1450 aa36.99■■■■□ 3.51
HOMER3-205ENST00000542541 ARHGAP35Q9NRY4 1499 aa36.96■■■■□ 3.51
HOMER3-205ENST00000542541 PTPRGP23470 1445 aa36.88■■■■□ 3.49
HOMER3-205ENST00000542541 FHOD3Q2V2M9 1422 aa36.87■■■■□ 3.49
HOMER3-205ENST00000542541 TTBK1Q5TCY1 1321 aaPredicted RBP36.84■■■■□ 3.49
HOMER3-205ENST00000542541 FMN1Q68DA7 1419 aa36.76■■■■□ 3.47
HOMER3-205ENST00000542541 CYB5RLQ6IPT4 315 aa36.73■■■■□ 3.47
HOMER3-205ENST00000542541 UACAQ9BZF9 1416 aa36.62■■■■□ 3.45
HOMER3-205ENST00000542541 PLB1Q6P1J6 1458 aa36.6■■■■□ 3.45
HOMER3-205ENST00000542541 VPS8Q8N3P4 1428 aa36.57■■■■□ 3.44
HOMER3-205ENST00000542541 ABCA8O94911 1581 aa36.55■■■■□ 3.44
HOMER3-205ENST00000542541 ADCY10Q96PN6 1610 aa36.53■■■■□ 3.44
HOMER3-205ENST00000542541 UHRF1BP1LA0JNW5 1464 aa36.53■■■■□ 3.44
HOMER3-205ENST00000542541 CASKIN1Q8WXD9 1431 aa36.52■■■■□ 3.44
HOMER3-205ENST00000542541 ATP1B4Q9UN42 357 aaPredicted RBP36.52■■■■□ 3.44
HOMER3-205ENST00000542541 RAPGEF6Q8TEU7 1601 aa36.51■■■■□ 3.44
HOMER3-205ENST00000542541 ABCC2Q92887 1545 aa36.5■■■■□ 3.43
HOMER3-205ENST00000542541 FYCO1Q9BQS8 1478 aa36.45■■■■□ 3.43
HOMER3-205ENST00000542541 NPM1P06748 294 aaKnown RBP eCLIP36.43■■■■□ 3.42
HOMER3-205ENST00000542541 PCF11O94913 1555 aaKnown RBP36.42■■■■□ 3.42
HOMER3-205ENST00000542541 HECW1Q76N89 1606 aa36.41■■■■□ 3.42
HOMER3-205ENST00000542541 NUP153P49790 1475 aaKnown RBP36.41■■■■□ 3.42
HOMER3-205ENST00000542541 ARID3CA6NKF2 412 aa36.34■■■■□ 3.41
HOMER3-205ENST00000542541 KDM5BQ9UGL1 1544 aa36.34■■■■□ 3.41
HOMER3-205ENST00000542541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
HOMER3-205ENST00000542541 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
HOMER3-205ENST00000542541 EPRSP07814 1512 aaKnown RBP36.32■■■■□ 3.4
HOMER3-205ENST00000542541 ATP10BO94823 1461 aa36.31■■■■□ 3.4
HOMER3-205ENST00000542541 APLP2Q06481 763 aa36.3■■■■□ 3.4
HOMER3-205ENST00000542541 CCDC18Q5T9S5 1454 aa36.29■■■■□ 3.4
HOMER3-205ENST00000542541 CDK11AQ9UQ88 783 aaPredicted RBP36.24■■■■□ 3.39
HOMER3-205ENST00000542541 ZCCHC11Q5TAX3 1644 aaKnown RBP36.22■■■■□ 3.39
HOMER3-205ENST00000542541 CDK13Q14004 1512 aaKnown RBP36.2■■■■□ 3.39
HOMER3-205ENST00000542541 PLEKHD1A6NEE1 506 aa36.18■■■■□ 3.38
HOMER3-205ENST00000542541 MAPKBP1O60336 1514 aa36.16■■■■□ 3.38
HOMER3-205ENST00000542541 MAP3K1Q13233 1512 aa36.15■■■■□ 3.38
HOMER3-205ENST00000542541 LRRIQ1Q96JM4 1722 aa36.14■■■■□ 3.38
HOMER3-205ENST00000542541 ASXL2Q76L83 1435 aa36.09■■■■□ 3.37
HOMER3-205ENST00000542541 TIAM1Q13009 1591 aa36.09■■■■□ 3.37
HOMER3-205ENST00000542541 MTUS2Q5JR59 1369 aa36.04■■■■□ 3.36
HOMER3-205ENST00000542541 CFAP43Q8NDM7 1665 aa36.03■■■■□ 3.36
HOMER3-205ENST00000542541 WDR7Q9Y4E6 1490 aa36.03■■■■□ 3.36
HOMER3-205ENST00000542541 TROQ12816 1431 aaPredicted RBP36■■■■□ 3.35
HOMER3-205ENST00000542541 KIF13AQ9H1H9 1805 aa35.99■■■■□ 3.35
HOMER3-205ENST00000542541 KANK4Q5T7N3 995 aaPredicted RBP35.97■■■■□ 3.35
HOMER3-205ENST00000542541 KCNH8Q96L42 1107 aa35.97■■■■□ 3.35
HOMER3-205ENST00000542541 LRRC9Q6ZRR7 1453 aa35.97■■■■□ 3.35
HOMER3-205ENST00000542541 DIP2BQ9P265 1576 aa35.94■■■■□ 3.34
HOMER3-205ENST00000542541 MAGI3Q5TCQ9 1506 aa35.94■■■■□ 3.34
HOMER3-205ENST00000542541 EHBP1L1Q8N3D4 1523 aa35.92■■■■□ 3.34
HOMER3-205ENST00000542541 ABCC10Q5T3U5 1492 aa35.9■■■■□ 3.34
HOMER3-205ENST00000542541 KIF14Q15058 1648 aa35.82■■■■□ 3.32
HOMER3-205ENST00000542541 FAM69CQ0P6D2 419 aa35.81■■■■□ 3.32
HOMER3-205ENST00000542541 PPARGC1BQ86YN6 1023 aaKnown RBP35.79■■■■□ 3.32
HOMER3-205ENST00000542541 GLI2P10070 1586 aa35.78■■■■□ 3.32
HOMER3-205ENST00000542541 TRHP20396 242 aaPredicted RBP35.76■■■■□ 3.32
HOMER3-205ENST00000542541 SUPT6HQ7KZ85 1726 aaKnown RBP35.75■■■■□ 3.31
HOMER3-205ENST00000542541 NCOA2Q15596 1464 aa35.73■■■■□ 3.31
HOMER3-205ENST00000542541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.72■■■■□ 3.31
HOMER3-205ENST00000542541 MAP3K4Q9Y6R4 1608 aa35.69■■■■□ 3.3
HOMER3-205ENST00000542541 ABCA9Q8IUA7 1624 aa35.69■■■■□ 3.3
HOMER3-205ENST00000542541 CCNB3Q8WWL7 1395 aa35.69■■■■□ 3.3
HOMER3-205ENST00000542541 CD109Q6YHK3 1445 aa35.65■■■■□ 3.3
HOMER3-205ENST00000542541 PPRC1Q5VV67 1664 aaKnown RBP35.64■■■■□ 3.3
HOMER3-205ENST00000542541 TTC37Q6PGP7 1564 aa35.63■■■■□ 3.29
HOMER3-205ENST00000542541 TSPOAP1O95153 1857 aa35.62■■■■□ 3.29
HOMER3-205ENST00000542541 PLCH2O75038 1416 aa35.59■■■■□ 3.29
HOMER3-205ENST00000542541 GPATCH8Q9UKJ3 1502 aaKnown RBP35.58■■■■□ 3.29
HOMER3-205ENST00000542541 PHLDB1Q86UU1 1377 aa35.56■■■■□ 3.28
HOMER3-205ENST00000542541 CFDP1Q9UEE9 299 aaPredicted RBP35.55■■■■□ 3.28
HOMER3-205ENST00000542541 MYOM3Q5VTT5 1437 aa35.54■■■■□ 3.28
HOMER3-205ENST00000542541 EFCAB2Q5VUJ9 269 aa35.52■■■■□ 3.28
HOMER3-205ENST00000542541 MYO5CQ9NQX4 1742 aa35.52■■■■□ 3.28
HOMER3-205ENST00000542541 ARAP3Q8WWN8 1544 aa35.51■■■■□ 3.27
HOMER3-205ENST00000542541 ITSN2Q9NZM3 1697 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms