RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
C2CD3-217ENST00000542452 PRG4Q92954 1404 aaPredicted RBP19.65■□□□□ 0.74
C2CD3-217ENST00000542452 RAPGEF2Q9Y4G8 1499 aa19.63■□□□□ 0.73
C2CD3-217ENST00000542452 JPH4Q96JJ6 628 aa19.6■□□□□ 0.73
C2CD3-217ENST00000542452 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
C2CD3-217ENST00000542452 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
C2CD3-217ENST00000542452 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
C2CD3-217ENST00000542452 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
C2CD3-217ENST00000542452 DISP1Q96F81 1524 aa19.49■□□□□ 0.71
C2CD3-217ENST00000542452 UGGT2Q9NYU1 1516 aa19.49■□□□□ 0.71
C2CD3-217ENST00000542452 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
C2CD3-217ENST00000542452 EEA1Q15075 1411 aa19.46■□□□□ 0.71
C2CD3-217ENST00000542452 KIAA0556O60303 1618 aa19.46■□□□□ 0.71
C2CD3-217ENST00000542452 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
C2CD3-217ENST00000542452 CARMIL2Q6F5E8 1435 aa19.39■□□□□ 0.69
C2CD3-217ENST00000542452 KIF21BO75037 1637 aa19.39■□□□□ 0.69
C2CD3-217ENST00000542452 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
C2CD3-217ENST00000542452 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
C2CD3-217ENST00000542452 PTPRGP23470 1445 aa19.35■□□□□ 0.69
C2CD3-217ENST00000542452 KIF13AQ9H1H9 1805 aa19.34■□□□□ 0.69
C2CD3-217ENST00000542452 TRHP20396 242 aaPredicted RBP19.32■□□□□ 0.68
C2CD3-217ENST00000542452 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
C2CD3-217ENST00000542452 SAMD9Q5K651 1589 aa19.31■□□□□ 0.68
C2CD3-217ENST00000542452 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
C2CD3-217ENST00000542452 ABCC2Q92887 1545 aa19.29■□□□□ 0.68
C2CD3-217ENST00000542452 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
C2CD3-217ENST00000542452 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
C2CD3-217ENST00000542452 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
C2CD3-217ENST00000542452 DIP2BQ9P265 1576 aa19.25■□□□□ 0.67
C2CD3-217ENST00000542452 ABCA8O94911 1581 aa19.23■□□□□ 0.67
C2CD3-217ENST00000542452 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
C2CD3-217ENST00000542452 ZCCHC11Q5TAX3 1644 aaKnown RBP19.22■□□□□ 0.67
C2CD3-217ENST00000542452 ABCC10Q5T3U5 1492 aa19.21■□□□□ 0.67
C2CD3-217ENST00000542452 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
C2CD3-217ENST00000542452 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
C2CD3-217ENST00000542452 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
C2CD3-217ENST00000542452 ASXL2Q76L83 1435 aa19.14■□□□□ 0.65
C2CD3-217ENST00000542452 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
C2CD3-217ENST00000542452 FHOD3Q2V2M9 1422 aa19.13■□□□□ 0.65
C2CD3-217ENST00000542452 EFCAB5A4FU69 1503 aa19.13■□□□□ 0.65
C2CD3-217ENST00000542452 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
C2CD3-217ENST00000542452 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
C2CD3-217ENST00000542452 PPRC1Q5VV67 1664 aaKnown RBP19.08■□□□□ 0.65
C2CD3-217ENST00000542452 TSPOAP1O95153 1857 aa19.08■□□□□ 0.65
C2CD3-217ENST00000542452 GLI2P10070 1586 aa19.08■□□□□ 0.65
C2CD3-217ENST00000542452 FAM69CQ0P6D2 419 aa19.08■□□□□ 0.64
C2CD3-217ENST00000542452 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
C2CD3-217ENST00000542452 ARHGAP35Q9NRY4 1499 aa19.04■□□□□ 0.64
C2CD3-217ENST00000542452 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
C2CD3-217ENST00000542452 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
C2CD3-217ENST00000542452 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
C2CD3-217ENST00000542452 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
C2CD3-217ENST00000542452 ATP10BO94823 1461 aa19.01■□□□□ 0.63
C2CD3-217ENST00000542452 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
C2CD3-217ENST00000542452 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
C2CD3-217ENST00000542452 LRRIQ1Q96JM4 1722 aa18.93■□□□□ 0.62
C2CD3-217ENST00000542452 KDM6BO15054 1643 aa18.92■□□□□ 0.62
C2CD3-217ENST00000542452 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
C2CD3-217ENST00000542452 HECW1Q76N89 1606 aa18.9■□□□□ 0.62
C2CD3-217ENST00000542452 FMN1Q68DA7 1419 aa18.88■□□□□ 0.61
C2CD3-217ENST00000542452 PCF11O94913 1555 aaKnown RBP18.88■□□□□ 0.61
C2CD3-217ENST00000542452 ABCA9Q8IUA7 1624 aa18.88■□□□□ 0.61
C2CD3-217ENST00000542452 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
C2CD3-217ENST00000542452 CLIP1P30622 1438 aa18.83■□□□□ 0.61
C2CD3-217ENST00000542452 KCNH8Q96L42 1107 aa18.83■□□□□ 0.6
C2CD3-217ENST00000542452 TEX14Q8IWB6 1497 aa18.83■□□□□ 0.6
C2CD3-217ENST00000542452 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.6
C2CD3-217ENST00000542452 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
C2CD3-217ENST00000542452 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
C2CD3-217ENST00000542452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
C2CD3-217ENST00000542452 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
C2CD3-217ENST00000542452 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.6
C2CD3-217ENST00000542452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.6
C2CD3-217ENST00000542452 CEP162Q5TB80 1403 aa18.75■□□□□ 0.59
C2CD3-217ENST00000542452 KIF14Q15058 1648 aa18.74■□□□□ 0.59
C2CD3-217ENST00000542452 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
C2CD3-217ENST00000542452 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
C2CD3-217ENST00000542452 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
C2CD3-217ENST00000542452 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
C2CD3-217ENST00000542452 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
C2CD3-217ENST00000542452 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
C2CD3-217ENST00000542452 TROQ12816 1431 aaPredicted RBP18.67■□□□□ 0.58
C2CD3-217ENST00000542452 ARAP3Q8WWN8 1544 aa18.67■□□□□ 0.58
C2CD3-217ENST00000542452 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
C2CD3-217ENST00000542452 NEO1Q92859 1461 aa18.66■□□□□ 0.58
C2CD3-217ENST00000542452 CFAP74Q9C0B2 1584 aa18.64■□□□□ 0.58
C2CD3-217ENST00000542452 RICTORQ6R327 1708 aa18.61■□□□□ 0.57
C2CD3-217ENST00000542452 FANCAO15360 1455 aa18.61■□□□□ 0.57
C2CD3-217ENST00000542452 CDC42BPBQ9Y5S2 1711 aa18.59■□□□□ 0.57
C2CD3-217ENST00000542452 PREX2Q70Z35 1606 aa18.59■□□□□ 0.57
C2CD3-217ENST00000542452 PLCH2O75038 1416 aa18.58■□□□□ 0.57
C2CD3-217ENST00000542452 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
C2CD3-217ENST00000542452 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
C2CD3-217ENST00000542452 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
C2CD3-217ENST00000542452 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
C2CD3-217ENST00000542452 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
C2CD3-217ENST00000542452 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
C2CD3-217ENST00000542452 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.56
C2CD3-217ENST00000542452 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.55
C2CD3-217ENST00000542452 ADGRL1O94910 1474 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms