RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 CUL7Q14999 1698 aa34.73■■■■□ 3.15
DDB1-220ENST00000542337 CARMIL1Q5VZK9 1371 aa34.7■■■■□ 3.15
DDB1-220ENST00000542337 RUSC2Q8N2Y8 1516 aa34.67■■■■□ 3.14
DDB1-220ENST00000542337 KIAA0586Q9BVV6 1533 aa34.65■■■■□ 3.14
DDB1-220ENST00000542337 NPM1P06748 294 aaKnown RBP eCLIP34.5■■■■□ 3.11
DDB1-220ENST00000542337 RAPGEF2Q9Y4G8 1499 aa34.39■■■■□ 3.1
DDB1-220ENST00000542337 CARMIL2Q6F5E8 1435 aa34.38■■■■□ 3.09
DDB1-220ENST00000542337 PTPRGP23470 1445 aa34.33■■■■□ 3.09
DDB1-220ENST00000542337 TTBK1Q5TCY1 1321 aaPredicted RBP34.31■■■■□ 3.08
DDB1-220ENST00000542337 IQGAP2Q13576 1575 aa34.31■■■■□ 3.08
DDB1-220ENST00000542337 TNIKQ9UKE5 1360 aa34.28■■■■□ 3.08
DDB1-220ENST00000542337 ADCY10Q96PN6 1610 aa34.22■■■■□ 3.07
DDB1-220ENST00000542337 FAM69CQ0P6D2 419 aa34.2■■■■□ 3.07
DDB1-220ENST00000542337 MAPKBP1O60336 1514 aa34.17■■■■□ 3.06
DDB1-220ENST00000542337 ABCC10Q5T3U5 1492 aa34.14■■■■□ 3.06
DDB1-220ENST00000542337 UGGT2Q9NYU1 1516 aa34.11■■■■□ 3.05
DDB1-220ENST00000542337 DISP1Q96F81 1524 aa34.1■■■■□ 3.05
DDB1-220ENST00000542337 PRXQ9BXM0 1461 aa34.07■■■■□ 3.04
DDB1-220ENST00000542337 KIF13AQ9H1H9 1805 aa34.06■■■■□ 3.04
DDB1-220ENST00000542337 UACAQ9BZF9 1416 aa34.05■■■■□ 3.04
DDB1-220ENST00000542337 ABCC2Q92887 1545 aa34.04■■■■□ 3.04
DDB1-220ENST00000542337 CSRNP3Q8WYN3 585 aa34.02■■■■□ 3.04
DDB1-220ENST00000542337 UHRF1BP1LA0JNW5 1464 aa34.01■■■■□ 3.03
DDB1-220ENST00000542337 DIP2BQ9P265 1576 aa33.98■■■■□ 3.03
DDB1-220ENST00000542337 GOLGA3Q08378 1498 aa33.97■■■■□ 3.03
DDB1-220ENST00000542337 KIAA0556O60303 1618 aa33.97■■■■□ 3.03
DDB1-220ENST00000542337 CTTNBP2Q8WZ74 1663 aa33.94■■■■□ 3.02
DDB1-220ENST00000542337 FAM9AQ8IZU1 332 aaPredicted RBP33.92■■■■□ 3.02
DDB1-220ENST00000542337 PLB1Q6P1J6 1458 aa33.91■■■■□ 3.02
DDB1-220ENST00000542337 EEA1Q15075 1411 aa33.9■■■■□ 3.02
DDB1-220ENST00000542337 ASXL2Q76L83 1435 aa33.9■■■■□ 3.02
DDB1-220ENST00000542337 KDM5BQ9UGL1 1544 aa33.83■■■■□ 3.01
DDB1-220ENST00000542337 AEBP2Q6ZN18 517 aaPredicted RBP33.82■■■■□ 3
DDB1-220ENST00000542337 P3H3Q8IVL6 736 aa33.72■■■□□ 2.99
DDB1-220ENST00000542337 GLI2P10070 1586 aa33.72■■■□□ 2.99
DDB1-220ENST00000542337 TSPOAP1O95153 1857 aa33.7■■■□□ 2.99
DDB1-220ENST00000542337 ZCCHC11Q5TAX3 1644 aaKnown RBP33.7■■■□□ 2.99
DDB1-220ENST00000542337 EPRSP07814 1512 aaKnown RBP33.67■■■□□ 2.98
DDB1-220ENST00000542337 KDM6BO15054 1643 aa33.65■■■□□ 2.98
DDB1-220ENST00000542337 ABCA8O94911 1581 aa33.64■■■□□ 2.98
DDB1-220ENST00000542337 CHIC1Q5VXU3 224 aa33.62■■■□□ 2.97
DDB1-220ENST00000542337 WDR7Q9Y4E6 1490 aa33.61■■■□□ 2.97
DDB1-220ENST00000542337 RANGAP1P46060 587 aaPredicted RBP33.59■■■□□ 2.97
DDB1-220ENST00000542337 KCNH8Q96L42 1107 aa33.57■■■□□ 2.96
DDB1-220ENST00000542337 TEX14Q8IWB6 1497 aa33.53■■■□□ 2.96
DDB1-220ENST00000542337 ARID3CA6NKF2 412 aa33.51■■■□□ 2.95
DDB1-220ENST00000542337 SAMD9Q5K651 1589 aa33.51■■■□□ 2.95
DDB1-220ENST00000542337 MAP3K4Q9Y6R4 1608 aa33.49■■■□□ 2.95
DDB1-220ENST00000542337 KIF21BO75037 1637 aa33.47■■■□□ 2.95
DDB1-220ENST00000542337 PPRC1Q5VV67 1664 aaKnown RBP33.46■■■□□ 2.95
DDB1-220ENST00000542337 UBTFP17480 764 aaKnown RBP33.44■■■□□ 2.94
DDB1-220ENST00000542337 CD109Q6YHK3 1445 aa33.44■■■□□ 2.94
DDB1-220ENST00000542337 ATP10BO94823 1461 aa33.44■■■□□ 2.94
DDB1-220ENST00000542337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.43■■■□□ 2.94
DDB1-220ENST00000542337 HNRNPUL2Q1KMD3 747 aaKnown RBP33.43■■■□□ 2.94
DDB1-220ENST00000542337 EHMT2Q96KQ7 1210 aa33.4■■■□□ 2.94
DDB1-220ENST00000542337 FHOD3Q2V2M9 1422 aa33.38■■■□□ 2.93
DDB1-220ENST00000542337 RAPGEF6Q8TEU7 1601 aa33.35■■■□□ 2.93
DDB1-220ENST00000542337 MAGI3Q5TCQ9 1506 aa33.33■■■□□ 2.93
DDB1-220ENST00000542337 EFCAB5A4FU69 1503 aa33.33■■■□□ 2.93
DDB1-220ENST00000542337 CFAP43Q8NDM7 1665 aa33.31■■■□□ 2.92
DDB1-220ENST00000542337 COL17A1Q9UMD9 1497 aaPredicted RBP33.31■■■□□ 2.92
DDB1-220ENST00000542337 NUP153P49790 1475 aaKnown RBP33.25■■■□□ 2.91
DDB1-220ENST00000542337 PLEKHD1A6NEE1 506 aa33.23■■■□□ 2.91
DDB1-220ENST00000542337 KDM4FA0A1W2PPD8 638 aa33.22■■■□□ 2.91
DDB1-220ENST00000542337 PHLDB1Q86UU1 1377 aa33.14■■■□□ 2.9
DDB1-220ENST00000542337 ATP1B4Q9UN42 357 aaPredicted RBP33.12■■■□□ 2.89
DDB1-220ENST00000542337 ABCA9Q8IUA7 1624 aa33.12■■■□□ 2.89
DDB1-220ENST00000542337 FMN1Q68DA7 1419 aa33.11■■■□□ 2.89
DDB1-220ENST00000542337 ARAP3Q8WWN8 1544 aa33.06■■■□□ 2.88
DDB1-220ENST00000542337 ARHGAP35Q9NRY4 1499 aa33.05■■■□□ 2.88
DDB1-220ENST00000542337 ADGRL1O94910 1474 aa33.01■■■□□ 2.88
DDB1-220ENST00000542337 NEO1Q92859 1461 aa33.01■■■□□ 2.88
DDB1-220ENST00000542337 CDK11AQ9UQ88 783 aaPredicted RBP33■■■□□ 2.87
DDB1-220ENST00000542337 CDK13Q14004 1512 aaKnown RBP32.94■■■□□ 2.86
DDB1-220ENST00000542337 RAPGEF3O95398 923 aa32.94■■■□□ 2.86
DDB1-220ENST00000542337 HECW1Q76N89 1606 aa32.91■■■□□ 2.86
DDB1-220ENST00000542337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.87■■■□□ 2.853e-6■■■■□ 20
DDB1-220ENST00000542337 FANCAO15360 1455 aa32.84■■■□□ 2.85
DDB1-220ENST00000542337 AKNAQ7Z591 1439 aa32.84■■■□□ 2.85
DDB1-220ENST00000542337 DENND4BO75064 1496 aaPredicted RBP32.8■■■□□ 2.84
DDB1-220ENST00000542337 CFAP74Q9C0B2 1584 aa32.79■■■□□ 2.84
DDB1-220ENST00000542337 TTC37Q6PGP7 1564 aa32.78■■■□□ 2.84
DDB1-220ENST00000542337 CLIP1P30622 1438 aa32.77■■■□□ 2.84
DDB1-220ENST00000542337 PLCH2O75038 1416 aa32.76■■■□□ 2.83
DDB1-220ENST00000542337 TROQ12816 1431 aaPredicted RBP32.74■■■□□ 2.83
DDB1-220ENST00000542337 CASKIN1Q8WXD9 1431 aa32.74■■■□□ 2.83
DDB1-220ENST00000542337 EFCAB2Q5VUJ9 269 aa32.73■■■□□ 2.83
DDB1-220ENST00000542337 ARID4BQ4LE39 1312 aaPredicted RBP32.71■■■□□ 2.83
DDB1-220ENST00000542337 CCDC18Q5T9S5 1454 aa32.68■■■□□ 2.82
DDB1-220ENST00000542337 FRMPD1Q5SYB0 1578 aa32.68■■■□□ 2.82
DDB1-220ENST00000542337 KIF14Q15058 1648 aa32.66■■■□□ 2.82
DDB1-220ENST00000542337 SCAPERQ9BY12 1400 aa32.65■■■□□ 2.82
DDB1-220ENST00000542337 PCF11O94913 1555 aaKnown RBP32.62■■■□□ 2.81
DDB1-220ENST00000542337 FYCO1Q9BQS8 1478 aa32.6■■■□□ 2.81
DDB1-220ENST00000542337 RICTORQ6R327 1708 aa32.6■■■□□ 2.81
DDB1-220ENST00000542337 MYO5CQ9NQX4 1742 aa32.57■■■□□ 2.81
DDB1-220ENST00000542337 MAGI2Q86UL8 1455 aa32.57■■■□□ 2.8
DDB1-220ENST00000542337 ARHGEF40Q8TER5 1519 aa32.56■■■□□ 2.8
DDB1-220ENST00000542337 POGZQ7Z3K3 1410 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms