RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 JPH4Q96JJ6 628 aa27■■□□□ 1.91
SCNN1A-217ENST00000542260 IGF1RP08069 1367 aa26.91■■□□□ 1.9
SCNN1A-217ENST00000542260 KIAA0586Q9BVV6 1533 aa26.89■■□□□ 1.89
SCNN1A-217ENST00000542260 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
SCNN1A-217ENST00000542260 NPM1P06748 294 aaKnown RBP eCLIP26.77■■□□□ 1.88
SCNN1A-217ENST00000542260 CARMIL1Q5VZK9 1371 aa26.76■■□□□ 1.87
SCNN1A-217ENST00000542260 ADCY10Q96PN6 1610 aa26.76■■□□□ 1.87
SCNN1A-217ENST00000542260 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
SCNN1A-217ENST00000542260 ABCC10Q5T3U5 1492 aa26.69■■□□□ 1.86
SCNN1A-217ENST00000542260 IQGAP2Q13576 1575 aa26.67■■□□□ 1.86
SCNN1A-217ENST00000542260 CARMIL2Q6F5E8 1435 aa26.66■■□□□ 1.86
SCNN1A-217ENST00000542260 DIP2BQ9P265 1576 aa26.66■■□□□ 1.86
SCNN1A-217ENST00000542260 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.86
SCNN1A-217ENST00000542260 FAM69CQ0P6D2 419 aa26.62■■□□□ 1.85
SCNN1A-217ENST00000542260 PTPRGP23470 1445 aa26.62■■□□□ 1.85
SCNN1A-217ENST00000542260 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
SCNN1A-217ENST00000542260 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
SCNN1A-217ENST00000542260 ABCC2Q92887 1545 aa26.5■■□□□ 1.83
SCNN1A-217ENST00000542260 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
SCNN1A-217ENST00000542260 DISP1Q96F81 1524 aa26.48■■□□□ 1.83
SCNN1A-217ENST00000542260 UGGT2Q9NYU1 1516 aa26.48■■□□□ 1.83
SCNN1A-217ENST00000542260 UHRF1BP1LA0JNW5 1464 aa26.46■■□□□ 1.83
SCNN1A-217ENST00000542260 TSPOAP1O95153 1857 aa26.46■■□□□ 1.83
SCNN1A-217ENST00000542260 KDM6BO15054 1643 aa26.45■■□□□ 1.82
SCNN1A-217ENST00000542260 CTTNBP2Q8WZ74 1663 aa26.44■■□□□ 1.82
SCNN1A-217ENST00000542260 UACAQ9BZF9 1416 aa26.43■■□□□ 1.82
SCNN1A-217ENST00000542260 KIAA0556O60303 1618 aa26.43■■□□□ 1.82
SCNN1A-217ENST00000542260 PLB1Q6P1J6 1458 aa26.41■■□□□ 1.82
SCNN1A-217ENST00000542260 ASXL2Q76L83 1435 aa26.39■■□□□ 1.81
SCNN1A-217ENST00000542260 GLI2P10070 1586 aa26.37■■□□□ 1.81
SCNN1A-217ENST00000542260 KDM5BQ9UGL1 1544 aa26.33■■□□□ 1.81
SCNN1A-217ENST00000542260 ZCCHC11Q5TAX3 1644 aaKnown RBP26.32■■□□□ 1.8
SCNN1A-217ENST00000542260 GOLGA3Q08378 1498 aa26.3■■□□□ 1.8
SCNN1A-217ENST00000542260 PPRC1Q5VV67 1664 aaKnown RBP26.27■■□□□ 1.8
SCNN1A-217ENST00000542260 PRXQ9BXM0 1461 aa26.26■■□□□ 1.79
SCNN1A-217ENST00000542260 EPRSP07814 1512 aaKnown RBP26.24■■□□□ 1.79
SCNN1A-217ENST00000542260 MAP3K4Q9Y6R4 1608 aa26.23■■□□□ 1.79
SCNN1A-217ENST00000542260 TEX14Q8IWB6 1497 aa26.18■■□□□ 1.78
SCNN1A-217ENST00000542260 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
SCNN1A-217ENST00000542260 ABCA8O94911 1581 aa26.15■■□□□ 1.78
SCNN1A-217ENST00000542260 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
SCNN1A-217ENST00000542260 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
SCNN1A-217ENST00000542260 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
SCNN1A-217ENST00000542260 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
SCNN1A-217ENST00000542260 EEA1Q15075 1411 aa26.03■■□□□ 1.76
SCNN1A-217ENST00000542260 SAMD9Q5K651 1589 aa26■■□□□ 1.75
SCNN1A-217ENST00000542260 COL17A1Q9UMD9 1497 aaPredicted RBP25.99■■□□□ 1.75
SCNN1A-217ENST00000542260 MAGI3Q5TCQ9 1506 aa25.98■■□□□ 1.75
SCNN1A-217ENST00000542260 CD109Q6YHK3 1445 aa25.98■■□□□ 1.75
SCNN1A-217ENST00000542260 KCNH8Q96L42 1107 aa25.94■■□□□ 1.74
SCNN1A-217ENST00000542260 P3H3Q8IVL6 736 aa25.93■■□□□ 1.74
SCNN1A-217ENST00000542260 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
SCNN1A-217ENST00000542260 RAPGEF6Q8TEU7 1601 aa25.92■■□□□ 1.74
SCNN1A-217ENST00000542260 ATP10BO94823 1461 aa25.89■■□□□ 1.73
SCNN1A-217ENST00000542260 ABCA9Q8IUA7 1624 aa25.85■■□□□ 1.73
SCNN1A-217ENST00000542260 ARID3CA6NKF2 412 aa25.84■■□□□ 1.73
SCNN1A-217ENST00000542260 KIF21BO75037 1637 aa25.82■■□□□ 1.72
SCNN1A-217ENST00000542260 EFCAB5A4FU69 1503 aa25.78■■□□□ 1.72
SCNN1A-217ENST00000542260 ARAP3Q8WWN8 1544 aa25.78■■□□□ 1.72
SCNN1A-217ENST00000542260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.76■■□□□ 1.71
SCNN1A-217ENST00000542260 HNRNPUL2Q1KMD3 747 aaKnown RBP25.76■■□□□ 1.71
SCNN1A-217ENST00000542260 PHLDB1Q86UU1 1377 aa25.76■■□□□ 1.71
SCNN1A-217ENST00000542260 FHOD3Q2V2M9 1422 aa25.76■■□□□ 1.71
SCNN1A-217ENST00000542260 NUP153P49790 1475 aaKnown RBP25.76■■□□□ 1.71
SCNN1A-217ENST00000542260 RANGAP1P46060 587 aaPredicted RBP25.75■■□□□ 1.71
SCNN1A-217ENST00000542260 NEO1Q92859 1461 aa25.7■■□□□ 1.7
SCNN1A-217ENST00000542260 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
SCNN1A-217ENST00000542260 CFAP74Q9C0B2 1584 aa25.61■■□□□ 1.69
SCNN1A-217ENST00000542260 HECW2Q9P2P5 1572 aa25.58■■□□□ 1.69
SCNN1A-217ENST00000542260 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
SCNN1A-217ENST00000542260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.55■■□□□ 1.68
SCNN1A-217ENST00000542260 UBTFP17480 764 aaKnown RBP25.55■■□□□ 1.68
SCNN1A-217ENST00000542260 RAPGEF3O95398 923 aa25.54■■□□□ 1.68
SCNN1A-217ENST00000542260 FMN1Q68DA7 1419 aa25.53■■□□□ 1.68
SCNN1A-217ENST00000542260 HECW1Q76N89 1606 aa25.52■■□□□ 1.68
SCNN1A-217ENST00000542260 FANCAO15360 1455 aa25.52■■□□□ 1.68
SCNN1A-217ENST00000542260 TTC37Q6PGP7 1564 aa25.51■■□□□ 1.67
SCNN1A-217ENST00000542260 CDK13Q14004 1512 aaKnown RBP25.5■■□□□ 1.67
SCNN1A-217ENST00000542260 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
SCNN1A-217ENST00000542260 RICTORQ6R327 1708 aa25.5■■□□□ 1.67
SCNN1A-217ENST00000542260 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
SCNN1A-217ENST00000542260 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
SCNN1A-217ENST00000542260 ARHGEF40Q8TER5 1519 aa25.47■■□□□ 1.67
SCNN1A-217ENST00000542260 AKNAQ7Z591 1439 aa25.47■■□□□ 1.67
SCNN1A-217ENST00000542260 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
SCNN1A-217ENST00000542260 ARHGAP35Q9NRY4 1499 aa25.46■■□□□ 1.67
SCNN1A-217ENST00000542260 BCORL1Q5H9F3 1711 aa25.45■■□□□ 1.66
SCNN1A-217ENST00000542260 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
SCNN1A-217ENST00000542260 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
SCNN1A-217ENST00000542260 ARID4BQ4LE39 1312 aaPredicted RBP25.4■■□□□ 1.66
SCNN1A-217ENST00000542260 MYO5CQ9NQX4 1742 aa25.4■■□□□ 1.66
SCNN1A-217ENST00000542260 PTPRMP28827 1452 aa25.4■■□□□ 1.66
SCNN1A-217ENST00000542260 CDK11AQ9UQ88 783 aaPredicted RBP25.39■■□□□ 1.66
SCNN1A-217ENST00000542260 PLCH2O75038 1416 aa25.37■■□□□ 1.65
SCNN1A-217ENST00000542260 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
SCNN1A-217ENST00000542260 KIF14Q15058 1648 aa25.37■■□□□ 1.65
SCNN1A-217ENST00000542260 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
SCNN1A-217ENST00000542260 MAGI2Q86UL8 1455 aa25.35■■□□□ 1.65
SCNN1A-217ENST00000542260 CLIP1P30622 1438 aa25.32■■□□□ 1.64
SCNN1A-217ENST00000542260 POGZQ7Z3K3 1410 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms