RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
GTDC1-219ENST00000542155 CHD1O14646 1710 aa27.61■■■□□ 2.01
GTDC1-219ENST00000542155 CLIP1P30622 1438 aa27.58■■■□□ 2.01
GTDC1-219ENST00000542155 CEP170Q5SW79 1584 aa27.58■■■□□ 2.01
GTDC1-219ENST00000542155 NUP160Q12769 1436 aa27.53■■■□□ 2
GTDC1-219ENST00000542155 ARHGAP35Q9NRY4 1499 aa27.49■■□□□ 1.99
GTDC1-219ENST00000542155 KIAA0586Q9BVV6 1533 aa27.48■■□□□ 1.99
GTDC1-219ENST00000542155 IQGAP2Q13576 1575 aa27.47■■□□□ 1.99
GTDC1-219ENST00000542155 P3H3Q8IVL6 736 aa27.44■■□□□ 1.98
GTDC1-219ENST00000542155 ARAP1Q96P48 1450 aa27.42■■□□□ 1.98
GTDC1-219ENST00000542155 JPH4Q96JJ6 628 aa27.34■■□□□ 1.97
GTDC1-219ENST00000542155 UGGT2Q9NYU1 1516 aa27.34■■□□□ 1.97
GTDC1-219ENST00000542155 SAMD9Q5K651 1589 aa27.34■■□□□ 1.97
GTDC1-219ENST00000542155 FHOD3Q2V2M9 1422 aa27.33■■□□□ 1.97
GTDC1-219ENST00000542155 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
GTDC1-219ENST00000542155 DISP1Q96F81 1524 aa27.29■■□□□ 1.96
GTDC1-219ENST00000542155 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
GTDC1-219ENST00000542155 VPS8Q8N3P4 1428 aa27.26■■□□□ 1.96
GTDC1-219ENST00000542155 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
GTDC1-219ENST00000542155 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
GTDC1-219ENST00000542155 SHROOM2Q13796 1616 aa27.2■■□□□ 1.94
GTDC1-219ENST00000542155 PRG4Q92954 1404 aaPredicted RBP27.19■■□□□ 1.94
GTDC1-219ENST00000542155 TTBK1Q5TCY1 1321 aaPredicted RBP27.16■■□□□ 1.94
GTDC1-219ENST00000542155 ERCC6L2Q5T890 1561 aa27.15■■□□□ 1.94
GTDC1-219ENST00000542155 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
GTDC1-219ENST00000542155 CARMIL2Q6F5E8 1435 aa27.11■■□□□ 1.93
GTDC1-219ENST00000542155 FMN1Q68DA7 1419 aa27.08■■□□□ 1.93
GTDC1-219ENST00000542155 PCF11O94913 1555 aaKnown RBP27.07■■□□□ 1.92
GTDC1-219ENST00000542155 ATP1B4Q9UN42 357 aaPredicted RBP27.03■■□□□ 1.92
GTDC1-219ENST00000542155 CASKIN1Q8WXD9 1431 aa27.01■■□□□ 1.91
GTDC1-219ENST00000542155 FYCO1Q9BQS8 1478 aa26.97■■□□□ 1.91
GTDC1-219ENST00000542155 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
GTDC1-219ENST00000542155 PTPRGP23470 1445 aa26.95■■□□□ 1.91
GTDC1-219ENST00000542155 LRRIQ1Q96JM4 1722 aa26.94■■□□□ 1.9
GTDC1-219ENST00000542155 KANK4Q5T7N3 995 aaPredicted RBP26.93■■□□□ 1.9
GTDC1-219ENST00000542155 APLP2Q06481 763 aa26.92■■□□□ 1.9
GTDC1-219ENST00000542155 ARID3CA6NKF2 412 aa26.92■■□□□ 1.9
GTDC1-219ENST00000542155 RAPGEF6Q8TEU7 1601 aa26.89■■□□□ 1.89
GTDC1-219ENST00000542155 NUP153P49790 1475 aaKnown RBP26.86■■□□□ 1.89
GTDC1-219ENST00000542155 ABCA8O94911 1581 aa26.86■■□□□ 1.89
GTDC1-219ENST00000542155 TIAM1Q13009 1591 aa26.86■■□□□ 1.89
GTDC1-219ENST00000542155 HECW1Q76N89 1606 aa26.84■■□□□ 1.89
GTDC1-219ENST00000542155 EPRSP07814 1512 aaKnown RBP26.82■■□□□ 1.88
GTDC1-219ENST00000542155 CDK13Q14004 1512 aaKnown RBP26.82■■□□□ 1.88
GTDC1-219ENST00000542155 MAP3K1Q13233 1512 aa26.81■■□□□ 1.88
GTDC1-219ENST00000542155 CFAP43Q8NDM7 1665 aa26.8■■□□□ 1.88
GTDC1-219ENST00000542155 UACAQ9BZF9 1416 aa26.79■■□□□ 1.88
GTDC1-219ENST00000542155 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
GTDC1-219ENST00000542155 LRRC9Q6ZRR7 1453 aa26.76■■□□□ 1.87
GTDC1-219ENST00000542155 MAGI3Q5TCQ9 1506 aa26.73■■□□□ 1.87
GTDC1-219ENST00000542155 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
GTDC1-219ENST00000542155 ATP10BO94823 1461 aa26.71■■□□□ 1.87
GTDC1-219ENST00000542155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.7■■□□□ 1.86
GTDC1-219ENST00000542155 HNRNPUL2Q1KMD3 747 aaKnown RBP26.7■■□□□ 1.86
GTDC1-219ENST00000542155 ABCC2Q92887 1545 aa26.7■■□□□ 1.86
GTDC1-219ENST00000542155 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
GTDC1-219ENST00000542155 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
GTDC1-219ENST00000542155 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
GTDC1-219ENST00000542155 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
GTDC1-219ENST00000542155 MTUS2Q5JR59 1369 aa26.64■■□□□ 1.86
GTDC1-219ENST00000542155 UHRF1BP1LA0JNW5 1464 aa26.64■■□□□ 1.86
GTDC1-219ENST00000542155 CYB5RLQ6IPT4 315 aa26.6■■□□□ 1.85
GTDC1-219ENST00000542155 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
GTDC1-219ENST00000542155 KDM5BQ9UGL1 1544 aa26.56■■□□□ 1.84
GTDC1-219ENST00000542155 EHBP1L1Q8N3D4 1523 aa26.56■■□□□ 1.84
GTDC1-219ENST00000542155 PCGF6Q9BYE7 350 aa26.56■■□□□ 1.84
GTDC1-219ENST00000542155 ZCCHC11Q5TAX3 1644 aaKnown RBP26.55■■□□□ 1.84
GTDC1-219ENST00000542155 PHLDB1Q86UU1 1377 aa26.55■■□□□ 1.84
GTDC1-219ENST00000542155 CDK11AQ9UQ88 783 aaPredicted RBP26.54■■□□□ 1.84
GTDC1-219ENST00000542155 PLEKHD1A6NEE1 506 aa26.52■■□□□ 1.84
GTDC1-219ENST00000542155 TROQ12816 1431 aaPredicted RBP26.51■■□□□ 1.83
GTDC1-219ENST00000542155 NCOA2Q15596 1464 aa26.51■■□□□ 1.83
GTDC1-219ENST00000542155 SUPT6HQ7KZ85 1726 aaKnown RBP26.48■■□□□ 1.83
GTDC1-219ENST00000542155 KIF14Q15058 1648 aa26.47■■□□□ 1.83
GTDC1-219ENST00000542155 KCNH8Q96L42 1107 aa26.4■■□□□ 1.82
GTDC1-219ENST00000542155 RRBP1Q9P2E9 1410 aaKnown RBP26.39■■□□□ 1.81
GTDC1-219ENST00000542155 NPM1P06748 294 aaKnown RBP eCLIP26.36■■□□□ 1.81
GTDC1-219ENST00000542155 MYOM3Q5VTT5 1437 aa26.35■■□□□ 1.81
GTDC1-219ENST00000542155 ASXL2Q76L83 1435 aa26.35■■□□□ 1.81
GTDC1-219ENST00000542155 ABCC10Q5T3U5 1492 aa26.34■■□□□ 1.81
GTDC1-219ENST00000542155 CCNB3Q8WWL7 1395 aa26.34■■□□□ 1.81
GTDC1-219ENST00000542155 FGD6Q6ZV73 1430 aa26.32■■□□□ 1.8
GTDC1-219ENST00000542155 WDR7Q9Y4E6 1490 aa26.32■■□□□ 1.8
GTDC1-219ENST00000542155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
GTDC1-219ENST00000542155 GPATCH8Q9UKJ3 1502 aaKnown RBP26.29■■□□□ 1.8
GTDC1-219ENST00000542155 DNAJC5Q9H3Z4 198 aa26.29■■□□□ 1.8
GTDC1-219ENST00000542155 TTC37Q6PGP7 1564 aa26.28■■□□□ 1.8
GTDC1-219ENST00000542155 FAM50AQ14320 339 aaKnown RBP26.27■■□□□ 1.8
GTDC1-219ENST00000542155 CDC42BPAQ5VT25 1732 aa26.25■■□□□ 1.79
GTDC1-219ENST00000542155 ZNF644Q9H582 1327 aaPredicted RBP26.24■■□□□ 1.79
GTDC1-219ENST00000542155 PTPN23Q9H3S7 1636 aa26.22■■□□□ 1.79
GTDC1-219ENST00000542155 ITGAEP38570 1179 aa26.21■■□□□ 1.79
GTDC1-219ENST00000542155 CFDP1Q9UEE9 299 aaPredicted RBP26.21■■□□□ 1.79
GTDC1-219ENST00000542155 MIA2Q96PC5 1412 aa26.2■■□□□ 1.79
GTDC1-219ENST00000542155 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
GTDC1-219ENST00000542155 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
GTDC1-219ENST00000542155 ITSN2Q9NZM3 1697 aa26.17■■□□□ 1.78
GTDC1-219ENST00000542155 ZNF777Q9ULD5 760 aaPredicted RBP26.16■■□□□ 1.78
GTDC1-219ENST00000542155 TCOF1Q13428 1488 aaKnown RBP26.16■■□□□ 1.78
GTDC1-219ENST00000542155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms