RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
RAB6A-208ENST00000541795 VPS8Q8N3P4 1428 aa27.82■■■□□ 2.04
RAB6A-208ENST00000541795 GRIN2AQ12879 1464 aa27.82■■■□□ 2.04
RAB6A-208ENST00000541795 EFCAB5A4FU69 1503 aa27.76■■■□□ 2.03
RAB6A-208ENST00000541795 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
RAB6A-208ENST00000541795 IQGAP2Q13576 1575 aa27.74■■■□□ 2.03
RAB6A-208ENST00000541795 FBLN2P98095 1184 aa27.68■■■□□ 2.02
RAB6A-208ENST00000541795 SAMD9Q5K651 1589 aa27.67■■■□□ 2.02
RAB6A-208ENST00000541795 CEP170Q5SW79 1584 aa27.67■■■□□ 2.02
RAB6A-208ENST00000541795 KIAA0586Q9BVV6 1533 aa27.66■■■□□ 2.02
RAB6A-208ENST00000541795 NUP160Q12769 1436 aa27.62■■■□□ 2.01
RAB6A-208ENST00000541795 CHD1O14646 1710 aa27.62■■■□□ 2.01
RAB6A-208ENST00000541795 FHOD3Q2V2M9 1422 aa27.61■■■□□ 2.01
RAB6A-208ENST00000541795 P3H3Q8IVL6 736 aa27.6■■■□□ 2.01
RAB6A-208ENST00000541795 PPARGC1BQ86YN6 1023 aaKnown RBP27.58■■■□□ 2.01
RAB6A-208ENST00000541795 UGGT2Q9NYU1 1516 aa27.58■■■□□ 2.01
RAB6A-208ENST00000541795 APLP2Q06481 763 aa27.52■■■□□ 2
RAB6A-208ENST00000541795 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
RAB6A-208ENST00000541795 PCF11O94913 1555 aaKnown RBP27.49■■□□□ 1.99
RAB6A-208ENST00000541795 FMN1Q68DA7 1419 aa27.49■■□□□ 1.99
RAB6A-208ENST00000541795 KIAA0556O60303 1618 aa27.46■■□□□ 1.99
RAB6A-208ENST00000541795 PCGF6Q9BYE7 350 aa27.44■■□□□ 1.98
RAB6A-208ENST00000541795 DISP1Q96F81 1524 aa27.44■■□□□ 1.98
RAB6A-208ENST00000541795 FYCO1Q9BQS8 1478 aa27.42■■□□□ 1.98
RAB6A-208ENST00000541795 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
RAB6A-208ENST00000541795 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
RAB6A-208ENST00000541795 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
RAB6A-208ENST00000541795 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
RAB6A-208ENST00000541795 TIAM1Q13009 1591 aa27.36■■□□□ 1.97
RAB6A-208ENST00000541795 CFAP43Q8NDM7 1665 aa27.34■■□□□ 1.97
RAB6A-208ENST00000541795 CARMIL2Q6F5E8 1435 aa27.32■■□□□ 1.96
RAB6A-208ENST00000541795 ATP1B4Q9UN42 357 aaPredicted RBP27.3■■□□□ 1.96
RAB6A-208ENST00000541795 SHROOM2Q13796 1616 aa27.28■■□□□ 1.96
RAB6A-208ENST00000541795 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
RAB6A-208ENST00000541795 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
RAB6A-208ENST00000541795 LRRIQ1Q96JM4 1722 aa27.25■■□□□ 1.95
RAB6A-208ENST00000541795 HECW1Q76N89 1606 aa27.25■■□□□ 1.95
RAB6A-208ENST00000541795 PRG4Q92954 1404 aaPredicted RBP27.23■■□□□ 1.95
RAB6A-208ENST00000541795 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
RAB6A-208ENST00000541795 RAPGEF6Q8TEU7 1601 aa27.18■■□□□ 1.94
RAB6A-208ENST00000541795 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
RAB6A-208ENST00000541795 EPRSP07814 1512 aaKnown RBP27.11■■□□□ 1.93
RAB6A-208ENST00000541795 PLB1Q6P1J6 1458 aa27.08■■□□□ 1.93
RAB6A-208ENST00000541795 NUP153P49790 1475 aaKnown RBP27.08■■□□□ 1.93
RAB6A-208ENST00000541795 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
RAB6A-208ENST00000541795 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
RAB6A-208ENST00000541795 ABCA8O94911 1581 aa27.05■■□□□ 1.92
RAB6A-208ENST00000541795 PTPRGP23470 1445 aa27.04■■□□□ 1.92
RAB6A-208ENST00000541795 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
RAB6A-208ENST00000541795 EHBP1L1Q8N3D4 1523 aa27.03■■□□□ 1.92
RAB6A-208ENST00000541795 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
RAB6A-208ENST00000541795 MAGI3Q5TCQ9 1506 aa26.99■■□□□ 1.91
RAB6A-208ENST00000541795 ARID3CA6NKF2 412 aa26.99■■□□□ 1.91
RAB6A-208ENST00000541795 SUPT6HQ7KZ85 1726 aaKnown RBP26.96■■□□□ 1.91
RAB6A-208ENST00000541795 RRBP1Q9P2E9 1410 aaKnown RBP26.96■■□□□ 1.91
RAB6A-208ENST00000541795 PHLDB1Q86UU1 1377 aa26.94■■□□□ 1.9
RAB6A-208ENST00000541795 UACAQ9BZF9 1416 aa26.9■■□□□ 1.9
RAB6A-208ENST00000541795 NCOA2Q15596 1464 aa26.89■■□□□ 1.9
RAB6A-208ENST00000541795 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
RAB6A-208ENST00000541795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
RAB6A-208ENST00000541795 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
RAB6A-208ENST00000541795 CDK11AQ9UQ88 783 aaPredicted RBP26.86■■□□□ 1.89
RAB6A-208ENST00000541795 ARHGEF11O15085 1522 aa26.86■■□□□ 1.89
RAB6A-208ENST00000541795 ATP10BO94823 1461 aa26.85■■□□□ 1.89
RAB6A-208ENST00000541795 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
RAB6A-208ENST00000541795 TROQ12816 1431 aaPredicted RBP26.8■■□□□ 1.88
RAB6A-208ENST00000541795 MYOM3Q5VTT5 1437 aa26.78■■□□□ 1.88
RAB6A-208ENST00000541795 FGD6Q6ZV73 1430 aa26.77■■□□□ 1.88
RAB6A-208ENST00000541795 UHRF1BP1LA0JNW5 1464 aa26.77■■□□□ 1.88
RAB6A-208ENST00000541795 ADCY10Q96PN6 1610 aa26.76■■□□□ 1.87
RAB6A-208ENST00000541795 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
RAB6A-208ENST00000541795 KIF14Q15058 1648 aa26.71■■□□□ 1.87
RAB6A-208ENST00000541795 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
RAB6A-208ENST00000541795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.69■■□□□ 1.863e-11■■■□□ 17
RAB6A-208ENST00000541795 ZCCHC11Q5TAX3 1644 aaKnown RBP26.68■■□□□ 1.86
RAB6A-208ENST00000541795 PTPN23Q9H3S7 1636 aa26.67■■□□□ 1.86
RAB6A-208ENST00000541795 KDM5BQ9UGL1 1544 aa26.66■■□□□ 1.86
RAB6A-208ENST00000541795 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
RAB6A-208ENST00000541795 ITSN2Q9NZM3 1697 aa26.63■■□□□ 1.85
RAB6A-208ENST00000541795 ITGAEP38570 1179 aa26.62■■□□□ 1.85
RAB6A-208ENST00000541795 TCOF1Q13428 1488 aaKnown RBP26.61■■□□□ 1.85
RAB6A-208ENST00000541795 ABCC10Q5T3U5 1492 aa26.57■■□□□ 1.84
RAB6A-208ENST00000541795 GPATCH8Q9UKJ3 1502 aaKnown RBP26.55■■□□□ 1.84
RAB6A-208ENST00000541795 HRCP23327 699 aa26.55■■□□□ 1.84
RAB6A-208ENST00000541795 CDC42BPAQ5VT25 1732 aa26.55■■□□□ 1.84
RAB6A-208ENST00000541795 RIMBP3CA6NJZ7 1639 aa26.49■■□□□ 1.83
RAB6A-208ENST00000541795 RIMBP3BA6NNM3 1639 aa26.49■■□□□ 1.83
RAB6A-208ENST00000541795 RIMBP3Q9UFD9 1639 aa26.49■■□□□ 1.83
RAB6A-208ENST00000541795 CFDP1Q9UEE9 299 aaPredicted RBP26.47■■□□□ 1.83
RAB6A-208ENST00000541795 TTC37Q6PGP7 1564 aa26.46■■□□□ 1.83
RAB6A-208ENST00000541795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.46■■□□□ 1.83
RAB6A-208ENST00000541795 PREX2Q70Z35 1606 aa26.45■■□□□ 1.82
RAB6A-208ENST00000541795 CAMSAP2Q08AD1 1489 aa26.44■■□□□ 1.82
RAB6A-208ENST00000541795 CCER1Q8TC90 406 aaPredicted RBP26.44■■□□□ 1.82
RAB6A-208ENST00000541795 PTPRKQ15262 1439 aa26.44■■□□□ 1.82
RAB6A-208ENST00000541795 WDR7Q9Y4E6 1490 aa26.43■■□□□ 1.82
RAB6A-208ENST00000541795 CDC42BPBQ9Y5S2 1711 aa26.41■■□□□ 1.82
RAB6A-208ENST00000541795 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
RAB6A-208ENST00000541795 MYO5CQ9NQX4 1742 aa26.41■■□□□ 1.82
RAB6A-208ENST00000541795 ZNF644Q9H582 1327 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms