RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 CUL7Q14999 1698 aa10.65□□□□□ -0.7
VEGFB-203ENST00000541681 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
VEGFB-203ENST00000541681 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
VEGFB-203ENST00000541681 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
VEGFB-203ENST00000541681 EEA1Q15075 1411 aa10.58□□□□□ -0.72
VEGFB-203ENST00000541681 KIF13AQ9H1H9 1805 aa10.58□□□□□ -0.72
VEGFB-203ENST00000541681 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
VEGFB-203ENST00000541681 IGF1RP08069 1367 aa10.56□□□□□ -0.72
VEGFB-203ENST00000541681 ADCY10Q96PN6 1610 aa10.56□□□□□ -0.72
VEGFB-203ENST00000541681 KIAA0586Q9BVV6 1533 aa10.56□□□□□ -0.72
VEGFB-203ENST00000541681 FAM9AQ8IZU1 332 aaPredicted RBP10.55□□□□□ -0.72
VEGFB-203ENST00000541681 CARMIL1Q5VZK9 1371 aa10.53□□□□□ -0.72
VEGFB-203ENST00000541681 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
VEGFB-203ENST00000541681 IQGAP2Q13576 1575 aa10.52□□□□□ -0.72
VEGFB-203ENST00000541681 DIP2BQ9P265 1576 aa10.51□□□□□ -0.73
VEGFB-203ENST00000541681 MAPKBP1O60336 1514 aa10.5□□□□□ -0.73
VEGFB-203ENST00000541681 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
VEGFB-203ENST00000541681 FAM69CQ0P6D2 419 aa10.49□□□□□ -0.73
VEGFB-203ENST00000541681 CARMIL2Q6F5E8 1435 aa10.49□□□□□ -0.73
VEGFB-203ENST00000541681 PTPRGP23470 1445 aa10.48□□□□□ -0.73
VEGFB-203ENST00000541681 ABCC10Q5T3U5 1492 aa10.48□□□□□ -0.73
VEGFB-203ENST00000541681 KIF21BO75037 1637 aa10.47□□□□□ -0.73
VEGFB-203ENST00000541681 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
VEGFB-203ENST00000541681 TNIKQ9UKE5 1360 aa10.46□□□□□ -0.74
VEGFB-203ENST00000541681 RAPGEF2Q9Y4G8 1499 aa10.46□□□□□ -0.74
VEGFB-203ENST00000541681 CTTNBP2Q8WZ74 1663 aa10.45□□□□□ -0.74
VEGFB-203ENST00000541681 KDM6BO15054 1643 aa10.44□□□□□ -0.74
VEGFB-203ENST00000541681 KIAA0556O60303 1618 aa10.44□□□□□ -0.74
VEGFB-203ENST00000541681 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
VEGFB-203ENST00000541681 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
VEGFB-203ENST00000541681 UGGT2Q9NYU1 1516 aa10.41□□□□□ -0.74
VEGFB-203ENST00000541681 GOLGA3Q08378 1498 aa10.41□□□□□ -0.74
VEGFB-203ENST00000541681 ASXL2Q76L83 1435 aa10.4□□□□□ -0.75
VEGFB-203ENST00000541681 UACAQ9BZF9 1416 aa10.4□□□□□ -0.75
VEGFB-203ENST00000541681 ZCCHC11Q5TAX3 1644 aaKnown RBP10.4□□□□□ -0.75
VEGFB-203ENST00000541681 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
VEGFB-203ENST00000541681 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
VEGFB-203ENST00000541681 PPRC1Q5VV67 1664 aaKnown RBP10.35□□□□□ -0.75
VEGFB-203ENST00000541681 GLI2P10070 1586 aa10.35□□□□□ -0.75
VEGFB-203ENST00000541681 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
VEGFB-203ENST00000541681 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
VEGFB-203ENST00000541681 KDM5BQ9UGL1 1544 aa10.33□□□□□ -0.76
VEGFB-203ENST00000541681 PRXQ9BXM0 1461 aa10.33□□□□□ -0.76
VEGFB-203ENST00000541681 MAP3K4Q9Y6R4 1608 aa10.33□□□□□ -0.76
VEGFB-203ENST00000541681 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
VEGFB-203ENST00000541681 WDR7Q9Y4E6 1490 aa10.31□□□□□ -0.76
VEGFB-203ENST00000541681 ARID3CA6NKF2 412 aa10.31□□□□□ -0.76
VEGFB-203ENST00000541681 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
VEGFB-203ENST00000541681 ABCA8O94911 1581 aa10.31□□□□□ -0.76
VEGFB-203ENST00000541681 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
VEGFB-203ENST00000541681 TEX14Q8IWB6 1497 aa10.3□□□□□ -0.76
VEGFB-203ENST00000541681 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
VEGFB-203ENST00000541681 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
VEGFB-203ENST00000541681 CFAP43Q8NDM7 1665 aa10.26□□□□□ -0.77
VEGFB-203ENST00000541681 KCNH8Q96L42 1107 aa10.26□□□□□ -0.77
VEGFB-203ENST00000541681 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
VEGFB-203ENST00000541681 SAMD9Q5K651 1589 aa10.25□□□□□ -0.77
VEGFB-203ENST00000541681 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
VEGFB-203ENST00000541681 RAPGEF6Q8TEU7 1601 aa10.24□□□□□ -0.77
VEGFB-203ENST00000541681 ADGRL1O94910 1474 aa10.23□□□□□ -0.77
VEGFB-203ENST00000541681 COL17A1Q9UMD9 1497 aaPredicted RBP10.23□□□□□ -0.77
VEGFB-203ENST00000541681 CD109Q6YHK3 1445 aa10.23□□□□□ -0.77
VEGFB-203ENST00000541681 CLIP1P30622 1438 aa10.22□□□□□ -0.77
VEGFB-203ENST00000541681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.77
VEGFB-203ENST00000541681 HNRNPUL2Q1KMD3 747 aaKnown RBP10.21□□□□□ -0.77
VEGFB-203ENST00000541681 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.78
VEGFB-203ENST00000541681 MAGI3Q5TCQ9 1506 aa10.19□□□□□ -0.78
VEGFB-203ENST00000541681 ATP10BO94823 1461 aa10.19□□□□□ -0.78
VEGFB-203ENST00000541681 ABCA9Q8IUA7 1624 aa10.17□□□□□ -0.78
VEGFB-203ENST00000541681 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
VEGFB-203ENST00000541681 EFCAB5A4FU69 1503 aa10.16□□□□□ -0.78
VEGFB-203ENST00000541681 NUP153P49790 1475 aaKnown RBP10.16□□□□□ -0.78
VEGFB-203ENST00000541681 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
VEGFB-203ENST00000541681 HECW2Q9P2P5 1572 aa10.11□□□□□ -0.79
VEGFB-203ENST00000541681 HRCP23327 699 aa10.11□□□□□ -0.79
VEGFB-203ENST00000541681 ARAP3Q8WWN8 1544 aa10.11□□□□□ -0.79
VEGFB-203ENST00000541681 TTC37Q6PGP7 1564 aa10.1□□□□□ -0.79
VEGFB-203ENST00000541681 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
VEGFB-203ENST00000541681 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
VEGFB-203ENST00000541681 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
VEGFB-203ENST00000541681 CFAP74Q9C0B2 1584 aa10.09□□□□□ -0.79
VEGFB-203ENST00000541681 HECW1Q76N89 1606 aa10.09□□□□□ -0.79
VEGFB-203ENST00000541681 NEO1Q92859 1461 aa10.09□□□□□ -0.79
VEGFB-203ENST00000541681 RAPGEF3O95398 923 aa10.08□□□□□ -0.8
VEGFB-203ENST00000541681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
VEGFB-203ENST00000541681 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
VEGFB-203ENST00000541681 APLP2Q06481 763 aa10.07□□□□□ -0.8
VEGFB-203ENST00000541681 FANCAO15360 1455 aa10.06□□□□□ -0.8
VEGFB-203ENST00000541681 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
VEGFB-203ENST00000541681 ARHGEF40Q8TER5 1519 aa10.06□□□□□ -0.8
VEGFB-203ENST00000541681 ARID4BQ4LE39 1312 aaPredicted RBP10.06□□□□□ -0.8
VEGFB-203ENST00000541681 RICTORQ6R327 1708 aa10.05□□□□□ -0.8
VEGFB-203ENST00000541681 PHLDB1Q86UU1 1377 aa10.05□□□□□ -0.8
VEGFB-203ENST00000541681 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
VEGFB-203ENST00000541681 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
VEGFB-203ENST00000541681 MYO5CQ9NQX4 1742 aa10.04□□□□□ -0.8
VEGFB-203ENST00000541681 DENND4BO75064 1496 aaPredicted RBP10.04□□□□□ -0.8
VEGFB-203ENST00000541681 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
VEGFB-203ENST00000541681 BCORL1Q5H9F3 1711 aa10.03□□□□□ -0.8
VEGFB-203ENST00000541681 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms