RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 IGF1RP08069 1367 aa24.38■■□□□ 1.49
SUDS3-203ENST00000541591 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
SUDS3-203ENST00000541591 JPH4Q96JJ6 628 aa24.33■■□□□ 1.49
SUDS3-203ENST00000541591 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
SUDS3-203ENST00000541591 ADCY10Q96PN6 1610 aa24.25■■□□□ 1.47
SUDS3-203ENST00000541591 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
SUDS3-203ENST00000541591 IQGAP2Q13576 1575 aa24.19■■□□□ 1.46
SUDS3-203ENST00000541591 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
SUDS3-203ENST00000541591 CTTNBP2Q8WZ74 1663 aa24.16■■□□□ 1.46
SUDS3-203ENST00000541591 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
SUDS3-203ENST00000541591 RAPGEF2Q9Y4G8 1499 aa24.08■■□□□ 1.45
SUDS3-203ENST00000541591 DIP2BQ9P265 1576 aa24.06■■□□□ 1.44
SUDS3-203ENST00000541591 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
SUDS3-203ENST00000541591 DISP1Q96F81 1524 aa24.01■■□□□ 1.43
SUDS3-203ENST00000541591 KIAA0556O60303 1618 aa24■■□□□ 1.43
SUDS3-203ENST00000541591 PTPRGP23470 1445 aa24■■□□□ 1.43
SUDS3-203ENST00000541591 CARMIL2Q6F5E8 1435 aa23.99■■□□□ 1.43
SUDS3-203ENST00000541591 NPM1P06748 294 aaKnown RBP eCLIP23.98■■□□□ 1.43
SUDS3-203ENST00000541591 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
SUDS3-203ENST00000541591 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
SUDS3-203ENST00000541591 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
SUDS3-203ENST00000541591 FAM69CQ0P6D2 419 aa23.94■■□□□ 1.42
SUDS3-203ENST00000541591 ZCCHC11Q5TAX3 1644 aaKnown RBP23.9■■□□□ 1.42
SUDS3-203ENST00000541591 ABCC2Q92887 1545 aa23.89■■□□□ 1.41
SUDS3-203ENST00000541591 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
SUDS3-203ENST00000541591 PPRC1Q5VV67 1664 aaKnown RBP23.85■■□□□ 1.41
SUDS3-203ENST00000541591 UACAQ9BZF9 1416 aa23.84■■□□□ 1.41
SUDS3-203ENST00000541591 KDM6BO15054 1643 aa23.82■■□□□ 1.4
SUDS3-203ENST00000541591 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
SUDS3-203ENST00000541591 ASXL2Q76L83 1435 aa23.81■■□□□ 1.4
SUDS3-203ENST00000541591 PLB1Q6P1J6 1458 aa23.76■■□□□ 1.39
SUDS3-203ENST00000541591 KDM5BQ9UGL1 1544 aa23.74■■□□□ 1.39
SUDS3-203ENST00000541591 GOLGA3Q08378 1498 aa23.73■■□□□ 1.39
SUDS3-203ENST00000541591 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
SUDS3-203ENST00000541591 ABCA8O94911 1581 aa23.72■■□□□ 1.39
SUDS3-203ENST00000541591 GLI2P10070 1586 aa23.72■■□□□ 1.39
SUDS3-203ENST00000541591 MAP3K4Q9Y6R4 1608 aa23.72■■□□□ 1.39
SUDS3-203ENST00000541591 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
SUDS3-203ENST00000541591 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
SUDS3-203ENST00000541591 EPRSP07814 1512 aaKnown RBP23.68■■□□□ 1.38
SUDS3-203ENST00000541591 SAMD9Q5K651 1589 aa23.67■■□□□ 1.38
SUDS3-203ENST00000541591 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
SUDS3-203ENST00000541591 RANGAP1P46060 587 aaPredicted RBP23.64■■□□□ 1.37
SUDS3-203ENST00000541591 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
SUDS3-203ENST00000541591 WDR7Q9Y4E6 1490 aa23.61■■□□□ 1.37
SUDS3-203ENST00000541591 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
SUDS3-203ENST00000541591 KIF21BO75037 1637 aa23.58■■□□□ 1.36
SUDS3-203ENST00000541591 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
SUDS3-203ENST00000541591 RAPGEF6Q8TEU7 1601 aa23.57■■□□□ 1.36
SUDS3-203ENST00000541591 EEA1Q15075 1411 aa23.57■■□□□ 1.36
SUDS3-203ENST00000541591 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
SUDS3-203ENST00000541591 COL17A1Q9UMD9 1497 aaPredicted RBP23.5■■□□□ 1.35
SUDS3-203ENST00000541591 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
SUDS3-203ENST00000541591 TEX14Q8IWB6 1497 aa23.47■■□□□ 1.35
SUDS3-203ENST00000541591 ATP10BO94823 1461 aa23.46■■□□□ 1.35
SUDS3-203ENST00000541591 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
SUDS3-203ENST00000541591 CD109Q6YHK3 1445 aa23.41■■□□□ 1.34
SUDS3-203ENST00000541591 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
SUDS3-203ENST00000541591 ABCA9Q8IUA7 1624 aa23.38■■□□□ 1.33
SUDS3-203ENST00000541591 EFCAB5A4FU69 1503 aa23.38■■□□□ 1.33
SUDS3-203ENST00000541591 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
SUDS3-203ENST00000541591 MAGI3Q5TCQ9 1506 aa23.36■■□□□ 1.33
SUDS3-203ENST00000541591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
SUDS3-203ENST00000541591 HNRNPUL2Q1KMD3 747 aaKnown RBP23.35■■□□□ 1.33
SUDS3-203ENST00000541591 ADGRL1O94910 1474 aa23.31■■□□□ 1.32
SUDS3-203ENST00000541591 LRRIQ1Q96JM4 1722 aa23.3■■□□□ 1.32
SUDS3-203ENST00000541591 UBTFP17480 764 aaKnown RBP23.3■■□□□ 1.32
SUDS3-203ENST00000541591 CDK13Q14004 1512 aaKnown RBP23.29■■□□□ 1.32
SUDS3-203ENST00000541591 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
SUDS3-203ENST00000541591 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
SUDS3-203ENST00000541591 HECW1Q76N89 1606 aa23.21■■□□□ 1.31
SUDS3-203ENST00000541591 FRMPD1Q5SYB0 1578 aa23.19■■□□□ 1.3
SUDS3-203ENST00000541591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
SUDS3-203ENST00000541591 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
SUDS3-203ENST00000541591 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
SUDS3-203ENST00000541591 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
SUDS3-203ENST00000541591 KIF14Q15058 1648 aa23.14■■□□□ 1.29
SUDS3-203ENST00000541591 MYO5CQ9NQX4 1742 aa23.13■■□□□ 1.29
SUDS3-203ENST00000541591 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
SUDS3-203ENST00000541591 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
SUDS3-203ENST00000541591 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
SUDS3-203ENST00000541591 NEO1Q92859 1461 aa23.11■■□□□ 1.29
SUDS3-203ENST00000541591 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
SUDS3-203ENST00000541591 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
SUDS3-203ENST00000541591 FANCAO15360 1455 aa23.05■■□□□ 1.28
SUDS3-203ENST00000541591 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
SUDS3-203ENST00000541591 AKNAQ7Z591 1439 aa23.01■■□□□ 1.27
SUDS3-203ENST00000541591 BCORL1Q5H9F3 1711 aa23.01■■□□□ 1.27
SUDS3-203ENST00000541591 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
SUDS3-203ENST00000541591 ADAMTSL3P82987 1691 aa23■■□□□ 1.27
SUDS3-203ENST00000541591 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
SUDS3-203ENST00000541591 HECW2Q9P2P5 1572 aa22.99■■□□□ 1.27
SUDS3-203ENST00000541591 PHLDB1Q86UU1 1377 aa22.99■■□□□ 1.27
SUDS3-203ENST00000541591 MADDQ8WXG6 1647 aa22.98■■□□□ 1.27
SUDS3-203ENST00000541591 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
SUDS3-203ENST00000541591 RIMS1Q86UR5 1692 aaKnown RBP22.96■■□□□ 1.27
SUDS3-203ENST00000541591 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
SUDS3-203ENST00000541591 ZMYM4Q5VZL5 1548 aa22.92■■□□□ 1.26
SUDS3-203ENST00000541591 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
SUDS3-203ENST00000541591 ARHGAP5Q13017 1502 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms