RNA–Protein interactions for RNA: ENST00000541453.1

GABARAPL1-209, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-209ENST00000541453 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
GABARAPL1-209ENST00000541453 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
GABARAPL1-209ENST00000541453 CTTNBP2Q8WZ74 1663 aa17.66■□□□□ 0.42
GABARAPL1-209ENST00000541453 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
GABARAPL1-209ENST00000541453 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
GABARAPL1-209ENST00000541453 NUP160Q12769 1436 aa17.6■□□□□ 0.41
GABARAPL1-209ENST00000541453 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
GABARAPL1-209ENST00000541453 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
GABARAPL1-209ENST00000541453 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
GABARAPL1-209ENST00000541453 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
GABARAPL1-209ENST00000541453 ADRA2BP18089 450 aa17.53■□□□□ 0.4
GABARAPL1-209ENST00000541453 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
GABARAPL1-209ENST00000541453 FOXD1Q16676 465 aa17.47■□□□□ 0.39
GABARAPL1-209ENST00000541453 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
GABARAPL1-209ENST00000541453 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
GABARAPL1-209ENST00000541453 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
GABARAPL1-209ENST00000541453 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
GABARAPL1-209ENST00000541453 SHROOM2Q13796 1616 aa17.44■□□□□ 0.38
GABARAPL1-209ENST00000541453 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
GABARAPL1-209ENST00000541453 CLIP1P30622 1438 aa17.43■□□□□ 0.38
GABARAPL1-209ENST00000541453 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
GABARAPL1-209ENST00000541453 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
GABARAPL1-209ENST00000541453 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.38
GABARAPL1-209ENST00000541453 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
GABARAPL1-209ENST00000541453 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
GABARAPL1-209ENST00000541453 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
GABARAPL1-209ENST00000541453 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
GABARAPL1-209ENST00000541453 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
GABARAPL1-209ENST00000541453 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
GABARAPL1-209ENST00000541453 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
GABARAPL1-209ENST00000541453 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
GABARAPL1-209ENST00000541453 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
GABARAPL1-209ENST00000541453 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
GABARAPL1-209ENST00000541453 PTPRGP23470 1445 aa17.23■□□□□ 0.35
GABARAPL1-209ENST00000541453 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
GABARAPL1-209ENST00000541453 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
GABARAPL1-209ENST00000541453 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
GABARAPL1-209ENST00000541453 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
GABARAPL1-209ENST00000541453 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
GABARAPL1-209ENST00000541453 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
GABARAPL1-209ENST00000541453 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
GABARAPL1-209ENST00000541453 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
GABARAPL1-209ENST00000541453 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
GABARAPL1-209ENST00000541453 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
GABARAPL1-209ENST00000541453 ABCA8O94911 1581 aa17.14■□□□□ 0.33
GABARAPL1-209ENST00000541453 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
GABARAPL1-209ENST00000541453 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
GABARAPL1-209ENST00000541453 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
GABARAPL1-209ENST00000541453 APLP2Q06481 763 aa17.1■□□□□ 0.33
GABARAPL1-209ENST00000541453 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
GABARAPL1-209ENST00000541453 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
GABARAPL1-209ENST00000541453 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
GABARAPL1-209ENST00000541453 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
GABARAPL1-209ENST00000541453 NUP153P49790 1475 aaKnown RBP17.06■□□□□ 0.32
GABARAPL1-209ENST00000541453 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
GABARAPL1-209ENST00000541453 ADCY10Q96PN6 1610 aa17.05■□□□□ 0.32
GABARAPL1-209ENST00000541453 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
GABARAPL1-209ENST00000541453 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
GABARAPL1-209ENST00000541453 KCNA4P22459 653 aa17.03■□□□□ 0.32
GABARAPL1-209ENST00000541453 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.32
GABARAPL1-209ENST00000541453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
GABARAPL1-209ENST00000541453 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
GABARAPL1-209ENST00000541453 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
GABARAPL1-209ENST00000541453 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
GABARAPL1-209ENST00000541453 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
GABARAPL1-209ENST00000541453 ZCCHC11Q5TAX3 1644 aaKnown RBP16.99■□□□□ 0.31
GABARAPL1-209ENST00000541453 ATP10BO94823 1461 aa16.99■□□□□ 0.31
GABARAPL1-209ENST00000541453 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
GABARAPL1-209ENST00000541453 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
GABARAPL1-209ENST00000541453 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
GABARAPL1-209ENST00000541453 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
GABARAPL1-209ENST00000541453 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
GABARAPL1-209ENST00000541453 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
GABARAPL1-209ENST00000541453 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
GABARAPL1-209ENST00000541453 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
GABARAPL1-209ENST00000541453 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
GABARAPL1-209ENST00000541453 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
GABARAPL1-209ENST00000541453 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
GABARAPL1-209ENST00000541453 MAPKBP1O60336 1514 aa16.86■□□□□ 0.29
GABARAPL1-209ENST00000541453 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
GABARAPL1-209ENST00000541453 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
GABARAPL1-209ENST00000541453 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
GABARAPL1-209ENST00000541453 KIF14Q15058 1648 aa16.84■□□□□ 0.29
GABARAPL1-209ENST00000541453 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
GABARAPL1-209ENST00000541453 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
GABARAPL1-209ENST00000541453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
GABARAPL1-209ENST00000541453 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
GABARAPL1-209ENST00000541453 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
GABARAPL1-209ENST00000541453 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
GABARAPL1-209ENST00000541453 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
GABARAPL1-209ENST00000541453 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
GABARAPL1-209ENST00000541453 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
GABARAPL1-209ENST00000541453 GLI2P10070 1586 aa16.72■□□□□ 0.27
GABARAPL1-209ENST00000541453 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
GABARAPL1-209ENST00000541453 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
GABARAPL1-209ENST00000541453 PHLDB1Q86UU1 1377 aa16.71■□□□□ 0.27
GABARAPL1-209ENST00000541453 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
GABARAPL1-209ENST00000541453 KIF13AQ9H1H9 1805 aa16.69■□□□□ 0.26
GABARAPL1-209ENST00000541453 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
GABARAPL1-209ENST00000541453 GPATCH8Q9UKJ3 1502 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms