RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 EEA1Q15075 1411 aa36.04■■■■□ 3.36
LINC00943-207ENST00000541359 ARAP1Q96P48 1450 aa36.04■■■■□ 3.36
LINC00943-207ENST00000541359 KIAA0586Q9BVV6 1533 aa36.03■■■■□ 3.36
LINC00943-207ENST00000541359 ERCC6L2Q5T890 1561 aa36.01■■■■□ 3.35
LINC00943-207ENST00000541359 CSRNP3Q8WYN3 585 aa35.95■■■■□ 3.35
LINC00943-207ENST00000541359 JPH4Q96JJ6 628 aa35.91■■■■□ 3.34
LINC00943-207ENST00000541359 PRG4Q92954 1404 aaPredicted RBP35.88■■■■□ 3.33
LINC00943-207ENST00000541359 IQGAP2Q13576 1575 aa35.86■■■■□ 3.33
LINC00943-207ENST00000541359 CYB5RLQ6IPT4 315 aa35.84■■■■□ 3.33
LINC00943-207ENST00000541359 FAM9AQ8IZU1 332 aaPredicted RBP35.83■■■■□ 3.33
LINC00943-207ENST00000541359 CTTNBP2Q8WZ74 1663 aa35.8■■■■□ 3.32
LINC00943-207ENST00000541359 KIF21BO75037 1637 aa35.74■■■■□ 3.31
LINC00943-207ENST00000541359 UGGT2Q9NYU1 1516 aa35.7■■■■□ 3.31
LINC00943-207ENST00000541359 DISP1Q96F81 1524 aa35.64■■■■□ 3.3
LINC00943-207ENST00000541359 CARMIL2Q6F5E8 1435 aa35.57■■■■□ 3.28
LINC00943-207ENST00000541359 KIAA0556O60303 1618 aa35.54■■■■□ 3.28
LINC00943-207ENST00000541359 TNIKQ9UKE5 1360 aa35.48■■■■□ 3.27
LINC00943-207ENST00000541359 GOLGA3Q08378 1498 aa35.48■■■■□ 3.27
LINC00943-207ENST00000541359 PTPRGP23470 1445 aa35.43■■■■□ 3.26
LINC00943-207ENST00000541359 ADCY10Q96PN6 1610 aa35.39■■■■□ 3.26
LINC00943-207ENST00000541359 SAMD9Q5K651 1589 aa35.38■■■■□ 3.25
LINC00943-207ENST00000541359 EHMT2Q96KQ7 1210 aa35.33■■■■□ 3.25
LINC00943-207ENST00000541359 TTBK1Q5TCY1 1321 aaPredicted RBP35.28■■■■□ 3.24
LINC00943-207ENST00000541359 UBTFP17480 764 aaKnown RBP35.25■■■■□ 3.23
LINC00943-207ENST00000541359 UHRF1BP1LA0JNW5 1464 aa35.24■■■■□ 3.23
LINC00943-207ENST00000541359 UACAQ9BZF9 1416 aa35.23■■■■□ 3.23
LINC00943-207ENST00000541359 ABCC2Q92887 1545 aa35.21■■■■□ 3.23
LINC00943-207ENST00000541359 EFCAB5A4FU69 1503 aa35.19■■■■□ 3.22
LINC00943-207ENST00000541359 P3H3Q8IVL6 736 aa35.17■■■■□ 3.22
LINC00943-207ENST00000541359 ABCA8O94911 1581 aa35.17■■■■□ 3.22
LINC00943-207ENST00000541359 PLB1Q6P1J6 1458 aa35.16■■■■□ 3.22
LINC00943-207ENST00000541359 RANGAP1P46060 587 aaPredicted RBP35.14■■■■□ 3.22
LINC00943-207ENST00000541359 MAPKBP1O60336 1514 aa35.12■■■■□ 3.21
LINC00943-207ENST00000541359 FHOD3Q2V2M9 1422 aa35.12■■■■□ 3.21
LINC00943-207ENST00000541359 KDM5BQ9UGL1 1544 aa35.07■■■■□ 3.21
LINC00943-207ENST00000541359 ARHGAP35Q9NRY4 1499 aa35.07■■■■□ 3.2
LINC00943-207ENST00000541359 NPM1P06748 294 aaKnown RBP eCLIP35.04■■■■□ 3.2
LINC00943-207ENST00000541359 ZCCHC11Q5TAX3 1644 aaKnown RBP35.01■■■■□ 3.19
LINC00943-207ENST00000541359 TRHP20396 242 aaPredicted RBP35■■■■□ 3.19
LINC00943-207ENST00000541359 RAPGEF6Q8TEU7 1601 aa34.97■■■■□ 3.19
LINC00943-207ENST00000541359 KIF13AQ9H1H9 1805 aa34.95■■■■□ 3.19
LINC00943-207ENST00000541359 ABCC10Q5T3U5 1492 aa34.91■■■■□ 3.18
LINC00943-207ENST00000541359 ASXL2Q76L83 1435 aa34.91■■■■□ 3.18
LINC00943-207ENST00000541359 DIP2BQ9P265 1576 aa34.91■■■■□ 3.18
LINC00943-207ENST00000541359 NUP153P49790 1475 aaKnown RBP34.86■■■■□ 3.17
LINC00943-207ENST00000541359 ATP10BO94823 1461 aa34.84■■■■□ 3.17
LINC00943-207ENST00000541359 CLIP1P30622 1438 aa34.82■■■■□ 3.17
LINC00943-207ENST00000541359 LOC105371045A0A1W2PR82 267 aa34.82■■■■□ 3.16
LINC00943-207ENST00000541359 FMN1Q68DA7 1419 aa34.81■■■■□ 3.16
LINC00943-207ENST00000541359 WDR7Q9Y4E6 1490 aa34.76■■■■□ 3.15
LINC00943-207ENST00000541359 FAM69CQ0P6D2 419 aa34.74■■■■□ 3.15
LINC00943-207ENST00000541359 EPRSP07814 1512 aaKnown RBP34.73■■■■□ 3.15
LINC00943-207ENST00000541359 ARID3CA6NKF2 412 aa34.73■■■■□ 3.15
LINC00943-207ENST00000541359 GLI2P10070 1586 aa34.73■■■■□ 3.15
LINC00943-207ENST00000541359 CEP162Q5TB80 1403 aa34.72■■■■□ 3.15
LINC00943-207ENST00000541359 HECW1Q76N89 1606 aa34.67■■■■□ 3.14
LINC00943-207ENST00000541359 PCF11O94913 1555 aaKnown RBP34.64■■■■□ 3.14
LINC00943-207ENST00000541359 CDK13Q14004 1512 aaKnown RBP34.62■■■■□ 3.13
LINC00943-207ENST00000541359 LRRIQ1Q96JM4 1722 aa34.61■■■■□ 3.13
LINC00943-207ENST00000541359 CASKIN1Q8WXD9 1431 aa34.6■■■■□ 3.13
LINC00943-207ENST00000541359 MAP3K4Q9Y6R4 1608 aa34.59■■■■□ 3.13
LINC00943-207ENST00000541359 PPRC1Q5VV67 1664 aaKnown RBP34.57■■■■□ 3.12
LINC00943-207ENST00000541359 TSPOAP1O95153 1857 aa34.54■■■■□ 3.12
LINC00943-207ENST00000541359 FYCO1Q9BQS8 1478 aa34.52■■■■□ 3.12
LINC00943-207ENST00000541359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.51■■■■□ 3.12
LINC00943-207ENST00000541359 HNRNPUL2Q1KMD3 747 aaKnown RBP34.51■■■■□ 3.12
LINC00943-207ENST00000541359 KCNH8Q96L42 1107 aa34.49■■■■□ 3.11
LINC00943-207ENST00000541359 CFAP43Q8NDM7 1665 aa34.48■■■■□ 3.11
LINC00943-207ENST00000541359 ATP1B4Q9UN42 357 aaPredicted RBP34.47■■■■□ 3.11
LINC00943-207ENST00000541359 ABCA9Q8IUA7 1624 aa34.45■■■■□ 3.11
LINC00943-207ENST00000541359 CCDC18Q5T9S5 1454 aa34.42■■■■□ 3.1
LINC00943-207ENST00000541359 PLEKHD1A6NEE1 506 aa34.42■■■■□ 3.1
LINC00943-207ENST00000541359 CD109Q6YHK3 1445 aa34.38■■■■□ 3.09
LINC00943-207ENST00000541359 MAGI3Q5TCQ9 1506 aa34.37■■■■□ 3.09
LINC00943-207ENST00000541359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.33■■■■□ 3.09
LINC00943-207ENST00000541359 TEX14Q8IWB6 1497 aa34.32■■■■□ 3.08
LINC00943-207ENST00000541359 TROQ12816 1431 aaPredicted RBP34.31■■■■□ 3.08
LINC00943-207ENST00000541359 VPS8Q8N3P4 1428 aa34.3■■■■□ 3.08
LINC00943-207ENST00000541359 TTC37Q6PGP7 1564 aa34.3■■■■□ 3.08
LINC00943-207ENST00000541359 KIF14Q15058 1648 aa34.28■■■■□ 3.08
LINC00943-207ENST00000541359 CDK11AQ9UQ88 783 aaPredicted RBP34.27■■■■□ 3.08
LINC00943-207ENST00000541359 KDM6BO15054 1643 aa34.25■■■■□ 3.07
LINC00943-207ENST00000541359 COL17A1Q9UMD9 1497 aaPredicted RBP34.2■■■■□ 3.07
LINC00943-207ENST00000541359 NEO1Q92859 1461 aa34.11■■■■□ 3.05
LINC00943-207ENST00000541359 TIAM1Q13009 1591 aa34.1■■■■□ 3.05
LINC00943-207ENST00000541359 MYO5CQ9NQX4 1742 aa34.1■■■■□ 3.05
LINC00943-207ENST00000541359 PLCH2O75038 1416 aa34.09■■■■□ 3.05
LINC00943-207ENST00000541359 ARAP3Q8WWN8 1544 aa34.07■■■■□ 3.04
LINC00943-207ENST00000541359 EHBP1L1Q8N3D4 1523 aa34.05■■■■□ 3.04
LINC00943-207ENST00000541359 FANCAO15360 1455 aa34.04■■■■□ 3.04
LINC00943-207ENST00000541359 PHLDB1Q86UU1 1377 aa34.04■■■■□ 3.04
LINC00943-207ENST00000541359 CFAP74Q9C0B2 1584 aa34.03■■■■□ 3.04
LINC00943-207ENST00000541359 MTUS2Q5JR59 1369 aa34.02■■■■□ 3.04
LINC00943-207ENST00000541359 MAP3K1Q13233 1512 aa34.02■■■■□ 3.04
LINC00943-207ENST00000541359 PREX2Q70Z35 1606 aa34■■■■□ 3.03
LINC00943-207ENST00000541359 CDC42BPBQ9Y5S2 1711 aa33.99■■■■□ 3.03
LINC00943-207ENST00000541359 CDC42BPAQ5VT25 1732 aa33.99■■■■□ 3.03
LINC00943-207ENST00000541359 AKNAQ7Z591 1439 aa33.97■■■■□ 3.03
LINC00943-207ENST00000541359 FRMPD1Q5SYB0 1578 aa33.94■■■■□ 3.02
LINC00943-207ENST00000541359 LRRC9Q6ZRR7 1453 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms