RNA–Protein interactions for RNA: ENST00000541213.5

POLE-216, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 1,675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-216ENST00000541213 RANGAP1P46060 587 aaPredicted RBP35.55■■■■□ 3.28
POLE-216ENST00000541213 CTTNBP2Q8WZ74 1663 aa35.5■■■■□ 3.27
POLE-216ENST00000541213 NUP160Q12769 1436 aa35.47■■■■□ 3.27
POLE-216ENST00000541213 KIAA0586Q9BVV6 1533 aa35.47■■■■□ 3.27
POLE-216ENST00000541213 CEP170Q5SW79 1584 aa35.41■■■■□ 3.26
POLE-216ENST00000541213 IQGAP2Q13576 1575 aa35.38■■■■□ 3.25
POLE-216ENST00000541213 CHD1O14646 1710 aa35.38■■■■□ 3.25
POLE-216ENST00000541213 ARHGAP35Q9NRY4 1499 aa35.33■■■■□ 3.25
POLE-216ENST00000541213 EFCAB5A4FU69 1503 aa35.28■■■■□ 3.24
POLE-216ENST00000541213 UGGT2Q9NYU1 1516 aa35.24■■■■□ 3.23
POLE-216ENST00000541213 JPH4Q96JJ6 628 aa35.24■■■■□ 3.23
POLE-216ENST00000541213 ARAP1Q96P48 1450 aa35.21■■■■□ 3.23
POLE-216ENST00000541213 P3H3Q8IVL6 736 aa35.21■■■■□ 3.23
POLE-216ENST00000541213 SAMD9Q5K651 1589 aa35.17■■■■□ 3.22
POLE-216ENST00000541213 VPS8Q8N3P4 1428 aa35.16■■■■□ 3.22
POLE-216ENST00000541213 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
POLE-216ENST00000541213 FHOD3Q2V2M9 1422 aa35.12■■■■□ 3.21
POLE-216ENST00000541213 CARMIL2Q6F5E8 1435 aa35.08■■■■□ 3.21
POLE-216ENST00000541213 CLASP1Q7Z460 1538 aa35.07■■■■□ 3.21
POLE-216ENST00000541213 DISP1Q96F81 1524 aa35.07■■■■□ 3.21
POLE-216ENST00000541213 FMN1Q68DA7 1419 aa35.03■■■■□ 3.2
POLE-216ENST00000541213 KIAA0556O60303 1618 aa35.01■■■■□ 3.2
POLE-216ENST00000541213 PRG4Q92954 1404 aaPredicted RBP35.01■■■■□ 3.19
POLE-216ENST00000541213 SHROOM2Q13796 1616 aa34.97■■■■□ 3.19
POLE-216ENST00000541213 APLP2Q06481 763 aa34.91■■■■□ 3.18
POLE-216ENST00000541213 CASKIN1Q8WXD9 1431 aa34.85■■■■□ 3.17
POLE-216ENST00000541213 TTBK1Q5TCY1 1321 aaPredicted RBP34.82■■■■□ 3.16
POLE-216ENST00000541213 ATP1B4Q9UN42 357 aaPredicted RBP34.8■■■■□ 3.16
POLE-216ENST00000541213 FYCO1Q9BQS8 1478 aa34.79■■■■□ 3.16
POLE-216ENST00000541213 PTPRGP23470 1445 aa34.78■■■■□ 3.16
POLE-216ENST00000541213 PCF11O94913 1555 aaKnown RBP34.76■■■■□ 3.16
POLE-216ENST00000541213 ERCC6L2Q5T890 1561 aa34.72■■■■□ 3.15
POLE-216ENST00000541213 MAP3K1Q13233 1512 aa34.67■■■■□ 3.14
POLE-216ENST00000541213 PPARGC1BQ86YN6 1023 aaKnown RBP34.65■■■■□ 3.14
POLE-216ENST00000541213 PLB1Q6P1J6 1458 aa34.63■■■■□ 3.13
POLE-216ENST00000541213 HECW1Q76N89 1606 aa34.62■■■■□ 3.13
POLE-216ENST00000541213 RAPGEF6Q8TEU7 1601 aa34.6■■■■□ 3.13
POLE-216ENST00000541213 CCDC18Q5T9S5 1454 aa34.57■■■■□ 3.12
POLE-216ENST00000541213 TIAM1Q13009 1591 aa34.57■■■■□ 3.12
POLE-216ENST00000541213 ABCA8O94911 1581 aa34.56■■■■□ 3.12
POLE-216ENST00000541213 KANK4Q5T7N3 995 aaPredicted RBP34.55■■■■□ 3.12
POLE-216ENST00000541213 UACAQ9BZF9 1416 aa34.55■■■■□ 3.12
POLE-216ENST00000541213 NUP153P49790 1475 aaKnown RBP34.54■■■■□ 3.12
POLE-216ENST00000541213 EPRSP07814 1512 aaKnown RBP34.53■■■■□ 3.12
POLE-216ENST00000541213 LRRC9Q6ZRR7 1453 aa34.47■■■■□ 3.11
POLE-216ENST00000541213 CFAP43Q8NDM7 1665 aa34.46■■■■□ 3.11
POLE-216ENST00000541213 ARID3CA6NKF2 412 aa34.46■■■■□ 3.11
POLE-216ENST00000541213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.44■■■■□ 3.1
POLE-216ENST00000541213 HNRNPUL2Q1KMD3 747 aaKnown RBP34.44■■■■□ 3.1
POLE-216ENST00000541213 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
POLE-216ENST00000541213 CDK11AQ9UQ88 783 aaPredicted RBP34.43■■■■□ 3.1
POLE-216ENST00000541213 LRRIQ1Q96JM4 1722 aa34.41■■■■□ 3.1
POLE-216ENST00000541213 UHRF1BP1LA0JNW5 1464 aa34.41■■■■□ 3.1
POLE-216ENST00000541213 CDK13Q14004 1512 aaKnown RBP34.4■■■■□ 3.1
POLE-216ENST00000541213 ABCC2Q92887 1545 aa34.4■■■■□ 3.1
POLE-216ENST00000541213 MTUS2Q5JR59 1369 aa34.4■■■■□ 3.1
POLE-216ENST00000541213 ATP10BO94823 1461 aa34.36■■■■□ 3.09
POLE-216ENST00000541213 TRIM26Q12899 539 aaPredicted RBP34.35■■■■□ 3.09
POLE-216ENST00000541213 PLEKHD1A6NEE1 506 aa34.29■■■■□ 3.08
POLE-216ENST00000541213 EHBP1L1Q8N3D4 1523 aa34.28■■■■□ 3.08
POLE-216ENST00000541213 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
POLE-216ENST00000541213 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
POLE-216ENST00000541213 RIMBP3Q9UFD9 1639 aa34.25■■■■□ 3.07
POLE-216ENST00000541213 MAGI3Q5TCQ9 1506 aa34.25■■■■□ 3.07
POLE-216ENST00000541213 KDM5BQ9UGL1 1544 aa34.24■■■■□ 3.07
POLE-216ENST00000541213 TROQ12816 1431 aaPredicted RBP34.2■■■■□ 3.07
POLE-216ENST00000541213 ADCY10Q96PN6 1610 aa34.2■■■■□ 3.07
POLE-216ENST00000541213 CYB5RLQ6IPT4 315 aa34.19■■■■□ 3.06
POLE-216ENST00000541213 NPM1P06748 294 aaKnown RBP eCLIP34.16■■■■□ 3.06
POLE-216ENST00000541213 NCOA2Q15596 1464 aa34.13■■■■□ 3.05
POLE-216ENST00000541213 SUPT6HQ7KZ85 1726 aaKnown RBP34.12■■■■□ 3.05
POLE-216ENST00000541213 PCGF6Q9BYE7 350 aa34.12■■■■□ 3.05
POLE-216ENST00000541213 PHLDB1Q86UU1 1377 aa34.11■■■■□ 3.05
POLE-216ENST00000541213 ZCCHC11Q5TAX3 1644 aaKnown RBP34.1■■■■□ 3.05
POLE-216ENST00000541213 RRBP1Q9P2E9 1410 aaKnown RBP34.02■■■■□ 3.04
POLE-216ENST00000541213 MYOM3Q5VTT5 1437 aa33.99■■■■□ 3.03
POLE-216ENST00000541213 CCNB3Q8WWL7 1395 aa33.97■■■■□ 3.03
POLE-216ENST00000541213 KIF14Q15058 1648 aa33.97■■■■□ 3.03
POLE-216ENST00000541213 KCNH8Q96L42 1107 aa33.94■■■■□ 3.02
POLE-216ENST00000541213 WDR7Q9Y4E6 1490 aa33.93■■■■□ 3.02
POLE-216ENST00000541213 ASXL2Q76L83 1435 aa33.92■■■■□ 3.02
POLE-216ENST00000541213 FGD6Q6ZV73 1430 aa33.92■■■■□ 3.02
POLE-216ENST00000541213 MIA2Q96PC5 1412 aa33.89■■■■□ 3.02
POLE-216ENST00000541213 ABCC10Q5T3U5 1492 aa33.89■■■■□ 3.02
POLE-216ENST00000541213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.84■■■■□ 3.01
POLE-216ENST00000541213 GPATCH8Q9UKJ3 1502 aaKnown RBP33.84■■■■□ 3.01
POLE-216ENST00000541213 FAM50AQ14320 339 aaKnown RBP33.84■■■■□ 3.01
POLE-216ENST00000541213 DNAJC5Q9H3Z4 198 aa33.84■■■■□ 3.01
POLE-216ENST00000541213 CFDP1Q9UEE9 299 aaPredicted RBP33.82■■■■□ 3
POLE-216ENST00000541213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.8■■■■□ 3
POLE-216ENST00000541213 MAPKBP1O60336 1514 aa33.79■■■■□ 3
POLE-216ENST00000541213 ITSN2Q9NZM3 1697 aa33.75■■■□□ 2.99
POLE-216ENST00000541213 TCOF1Q13428 1488 aaKnown RBP33.73■■■□□ 2.99
POLE-216ENST00000541213 PTPN23Q9H3S7 1636 aa33.73■■■□□ 2.99
POLE-216ENST00000541213 TTC37Q6PGP7 1564 aa33.71■■■□□ 2.99
POLE-216ENST00000541213 PLCH2O75038 1416 aa33.68■■■□□ 2.98
POLE-216ENST00000541213 ZNF777Q9ULD5 760 aaPredicted RBP33.68■■■□□ 2.98
POLE-216ENST00000541213 CDC42BPAQ5VT25 1732 aa33.67■■■□□ 2.98
POLE-216ENST00000541213 ITGAEP38570 1179 aa33.66■■■□□ 2.98
POLE-216ENST00000541213 ABCA9Q8IUA7 1624 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms