RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 TRHP20396 242 aaPredicted RBP34.58■■■■□ 3.13
ATN1-204ENST00000541029 JPH4Q96JJ6 628 aa34.52■■■■□ 3.12
ATN1-204ENST00000541029 KIAA0586Q9BVV6 1533 aa34.51■■■■□ 3.12
ATN1-204ENST00000541029 CARMIL1Q5VZK9 1371 aa34.5■■■■□ 3.11
ATN1-204ENST00000541029 IQGAP2Q13576 1575 aa34.34■■■■□ 3.09
ATN1-204ENST00000541029 RAPGEF2Q9Y4G8 1499 aa34.29■■■■□ 3.08
ATN1-204ENST00000541029 ADCY10Q96PN6 1610 aa34.27■■■■□ 3.08
ATN1-204ENST00000541029 KIF13AQ9H1H9 1805 aa34.23■■■■□ 3.07
ATN1-204ENST00000541029 CTTNBP2Q8WZ74 1663 aa34.19■■■■□ 3.06
ATN1-204ENST00000541029 CARMIL2Q6F5E8 1435 aa34.13■■■■□ 3.05
ATN1-204ENST00000541029 MAPKBP1O60336 1514 aa34.1■■■■□ 3.05
ATN1-204ENST00000541029 DISP1Q96F81 1524 aa34.09■■■■□ 3.05
ATN1-204ENST00000541029 UGGT2Q9NYU1 1516 aa34.09■■■■□ 3.05
ATN1-204ENST00000541029 PTPRGP23470 1445 aa34.07■■■■□ 3.04
ATN1-204ENST00000541029 TNIKQ9UKE5 1360 aa34.07■■■■□ 3.04
ATN1-204ENST00000541029 KIAA0556O60303 1618 aa34.05■■■■□ 3.04
ATN1-204ENST00000541029 PRXQ9BXM0 1461 aa34.05■■■■□ 3.04
ATN1-204ENST00000541029 TTBK1Q5TCY1 1321 aaPredicted RBP34.03■■■■□ 3.04
ATN1-204ENST00000541029 NPM1P06748 294 aaKnown RBP eCLIP34■■■■□ 3.03
ATN1-204ENST00000541029 DIP2BQ9P265 1576 aa34■■■■□ 3.03
ATN1-204ENST00000541029 ABCC10Q5T3U5 1492 aa33.96■■■■□ 3.03
ATN1-204ENST00000541029 ABCC2Q92887 1545 aa33.92■■■■□ 3.02
ATN1-204ENST00000541029 UHRF1BP1LA0JNW5 1464 aa33.88■■■■□ 3.01
ATN1-204ENST00000541029 UACAQ9BZF9 1416 aa33.86■■■■□ 3.01
ATN1-204ENST00000541029 FAM69CQ0P6D2 419 aa33.83■■■■□ 3.01
ATN1-204ENST00000541029 GOLGA3Q08378 1498 aa33.82■■■■□ 3
ATN1-204ENST00000541029 TSPOAP1O95153 1857 aa33.81■■■■□ 3
ATN1-204ENST00000541029 EEA1Q15075 1411 aa33.79■■■■□ 3
ATN1-204ENST00000541029 CSRNP3Q8WYN3 585 aa33.78■■■■□ 3
ATN1-204ENST00000541029 ZCCHC11Q5TAX3 1644 aaKnown RBP33.78■■■■□ 3
ATN1-204ENST00000541029 KDM5BQ9UGL1 1544 aa33.74■■■□□ 2.99
ATN1-204ENST00000541029 ASXL2Q76L83 1435 aa33.74■■■□□ 2.99
ATN1-204ENST00000541029 PLB1Q6P1J6 1458 aa33.69■■■□□ 2.98
ATN1-204ENST00000541029 ABCA8O94911 1581 aa33.68■■■□□ 2.98
ATN1-204ENST00000541029 SAMD9Q5K651 1589 aa33.65■■■□□ 2.98
ATN1-204ENST00000541029 GLI2P10070 1586 aa33.64■■■□□ 2.98
ATN1-204ENST00000541029 PPRC1Q5VV67 1664 aaKnown RBP33.62■■■□□ 2.97
ATN1-204ENST00000541029 KIF21BO75037 1637 aa33.62■■■□□ 2.97
ATN1-204ENST00000541029 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
ATN1-204ENST00000541029 KDM6BO15054 1643 aa33.59■■■□□ 2.97
ATN1-204ENST00000541029 EPRSP07814 1512 aaKnown RBP33.56■■■□□ 2.96
ATN1-204ENST00000541029 MAP3K4Q9Y6R4 1608 aa33.54■■■□□ 2.96
ATN1-204ENST00000541029 CHIC1Q5VXU3 224 aa33.54■■■□□ 2.96
ATN1-204ENST00000541029 WDR7Q9Y4E6 1490 aa33.5■■■□□ 2.95
ATN1-204ENST00000541029 P3H3Q8IVL6 736 aa33.49■■■□□ 2.95
ATN1-204ENST00000541029 RAPGEF6Q8TEU7 1601 aa33.43■■■□□ 2.94
ATN1-204ENST00000541029 RANGAP1P46060 587 aaPredicted RBP33.37■■■□□ 2.93
ATN1-204ENST00000541029 FHOD3Q2V2M9 1422 aa33.36■■■□□ 2.93
ATN1-204ENST00000541029 CFAP43Q8NDM7 1665 aa33.36■■■□□ 2.93
ATN1-204ENST00000541029 EFCAB5A4FU69 1503 aa33.35■■■□□ 2.93
ATN1-204ENST00000541029 ATP10BO94823 1461 aa33.31■■■□□ 2.92
ATN1-204ENST00000541029 TEX14Q8IWB6 1497 aa33.31■■■□□ 2.92
ATN1-204ENST00000541029 ARID3CA6NKF2 412 aa33.31■■■□□ 2.92
ATN1-204ENST00000541029 EHMT2Q96KQ7 1210 aa33.26■■■□□ 2.91
ATN1-204ENST00000541029 NUP153P49790 1475 aaKnown RBP33.25■■■□□ 2.91
ATN1-204ENST00000541029 AEBP2Q6ZN18 517 aaPredicted RBP33.22■■■□□ 2.91
ATN1-204ENST00000541029 KCNH8Q96L42 1107 aa33.22■■■□□ 2.91
ATN1-204ENST00000541029 COL17A1Q9UMD9 1497 aaPredicted RBP33.21■■■□□ 2.91
ATN1-204ENST00000541029 CD109Q6YHK3 1445 aa33.19■■■□□ 2.9
ATN1-204ENST00000541029 MAGI3Q5TCQ9 1506 aa33.19■■■□□ 2.9
ATN1-204ENST00000541029 ABCA9Q8IUA7 1624 aa33.17■■■□□ 2.9
ATN1-204ENST00000541029 UBTFP17480 764 aaKnown RBP33.16■■■□□ 2.9
ATN1-204ENST00000541029 ARHGAP35Q9NRY4 1499 aa33.08■■■□□ 2.89
ATN1-204ENST00000541029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.07■■■□□ 2.88
ATN1-204ENST00000541029 HNRNPUL2Q1KMD3 747 aaKnown RBP33.07■■■□□ 2.88
ATN1-204ENST00000541029 CDK13Q14004 1512 aaKnown RBP33■■■□□ 2.87
ATN1-204ENST00000541029 HECW1Q76N89 1606 aa32.99■■■□□ 2.87
ATN1-204ENST00000541029 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
ATN1-204ENST00000541029 ARAP3Q8WWN8 1544 aa32.92■■■□□ 2.86
ATN1-204ENST00000541029 KDM4FA0A1W2PPD8 638 aa32.91■■■□□ 2.86
ATN1-204ENST00000541029 TTC37Q6PGP7 1564 aa32.91■■■□□ 2.86
ATN1-204ENST00000541029 LRRIQ1Q96JM4 1722 aa32.91■■■□□ 2.86
ATN1-204ENST00000541029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.88■■■□□ 2.85
ATN1-204ENST00000541029 ADGRL1O94910 1474 aa32.87■■■□□ 2.85
ATN1-204ENST00000541029 PLEKHD1A6NEE1 506 aa32.87■■■□□ 2.85
ATN1-204ENST00000541029 NEO1Q92859 1461 aa32.86■■■□□ 2.85
ATN1-204ENST00000541029 PCF11O94913 1555 aaKnown RBP32.81■■■□□ 2.84
ATN1-204ENST00000541029 FRMPD1Q5SYB0 1578 aa32.8■■■□□ 2.84
ATN1-204ENST00000541029 CFAP74Q9C0B2 1584 aa32.8■■■□□ 2.84
ATN1-204ENST00000541029 PHLDB1Q86UU1 1377 aa32.8■■■□□ 2.84
ATN1-204ENST00000541029 ATP1B4Q9UN42 357 aaPredicted RBP32.79■■■□□ 2.84
ATN1-204ENST00000541029 KIF14Q15058 1648 aa32.74■■■□□ 2.83
ATN1-204ENST00000541029 RICTORQ6R327 1708 aa32.72■■■□□ 2.83
ATN1-204ENST00000541029 MYO5CQ9NQX4 1742 aa32.72■■■□□ 2.83
ATN1-204ENST00000541029 FANCAO15360 1455 aa32.72■■■□□ 2.83
ATN1-204ENST00000541029 RAPGEF3O95398 923 aa32.67■■■□□ 2.82
ATN1-204ENST00000541029 CLIP1P30622 1438 aa32.67■■■□□ 2.82
ATN1-204ENST00000541029 CASKIN1Q8WXD9 1431 aa32.67■■■□□ 2.82
ATN1-204ENST00000541029 AKNAQ7Z591 1439 aa32.66■■■□□ 2.82
ATN1-204ENST00000541029 CCDC18Q5T9S5 1454 aa32.63■■■□□ 2.81
ATN1-204ENST00000541029 TROQ12816 1431 aaPredicted RBP32.63■■■□□ 2.81
ATN1-204ENST00000541029 DENND4BO75064 1496 aaPredicted RBP32.61■■■□□ 2.81
ATN1-204ENST00000541029 FYCO1Q9BQS8 1478 aa32.61■■■□□ 2.81
ATN1-204ENST00000541029 CDK11AQ9UQ88 783 aaPredicted RBP32.61■■■□□ 2.81
ATN1-204ENST00000541029 ARHGEF40Q8TER5 1519 aa32.6■■■□□ 2.81
ATN1-204ENST00000541029 PLCH2O75038 1416 aa32.6■■■□□ 2.81
ATN1-204ENST00000541029 ZMYM4Q5VZL5 1548 aa32.56■■■□□ 2.8
ATN1-204ENST00000541029 CDC42BPBQ9Y5S2 1711 aa32.51■■■□□ 2.79
ATN1-204ENST00000541029 PREX2Q70Z35 1606 aa32.49■■■□□ 2.79
ATN1-204ENST00000541029 ARHGAP5Q13017 1502 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms