RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
TTC39C-203ENST00000540918 TONSLQ96HA7 1378 aa13.42□□□□□ -0.26
TTC39C-203ENST00000540918 ANP32CO43423 234 aa13.42□□□□□ -0.26
TTC39C-203ENST00000540918 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
TTC39C-203ENST00000540918 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
TTC39C-203ENST00000540918 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
TTC39C-203ENST00000540918 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
TTC39C-203ENST00000540918 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
TTC39C-203ENST00000540918 MIER1Q8N108 512 aa13.35□□□□□ -0.27
TTC39C-203ENST00000540918 FOXD1Q16676 465 aa13.33□□□□□ -0.27
TTC39C-203ENST00000540918 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
TTC39C-203ENST00000540918 ERICH6Q7L0X2 663 aa13.31□□□□□ -0.28
TTC39C-203ENST00000540918 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
TTC39C-203ENST00000540918 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
TTC39C-203ENST00000540918 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
TTC39C-203ENST00000540918 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
TTC39C-203ENST00000540918 RAD54L2Q9Y4B4 1467 aa13.28□□□□□ -0.28
TTC39C-203ENST00000540918 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.28
TTC39C-203ENST00000540918 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
TTC39C-203ENST00000540918 NESP48681 1621 aa13.27□□□□□ -0.29
TTC39C-203ENST00000540918 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
TTC39C-203ENST00000540918 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
TTC39C-203ENST00000540918 CCNB3Q8WWL7 1395 aa13.24□□□□□ -0.29
TTC39C-203ENST00000540918 ACIN1Q9UKV3 1341 aaKnown RBP13.21□□□□□ -0.29
TTC39C-203ENST00000540918 HNRNPUQ00839 825 aaKnown RBP eCLIP13.2□□□□□ -0.3
TTC39C-203ENST00000540918 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
TTC39C-203ENST00000540918 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
TTC39C-203ENST00000540918 IGF1RP08069 1367 aa13.18□□□□□ -0.3
TTC39C-203ENST00000540918 MLECQ14165 292 aa13.18□□□□□ -0.3
TTC39C-203ENST00000540918 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.3
TTC39C-203ENST00000540918 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
TTC39C-203ENST00000540918 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
TTC39C-203ENST00000540918 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
TTC39C-203ENST00000540918 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.31
TTC39C-203ENST00000540918 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
TTC39C-203ENST00000540918 HNRNPMP52272 730 aaKnown RBP eCLIP13.13□□□□□ -0.31
TTC39C-203ENST00000540918 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
TTC39C-203ENST00000540918 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
TTC39C-203ENST00000540918 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
TTC39C-203ENST00000540918 MRS2Q9HD23 443 aa13.11□□□□□ -0.31
TTC39C-203ENST00000540918 GGT6Q6P531 493 aa13.1□□□□□ -0.31
TTC39C-203ENST00000540918 FKBP8Q14318 412 aa13.1□□□□□ -0.31
TTC39C-203ENST00000540918 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
TTC39C-203ENST00000540918 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.31
TTC39C-203ENST00000540918 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.32
TTC39C-203ENST00000540918 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
TTC39C-203ENST00000540918 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
TTC39C-203ENST00000540918 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
TTC39C-203ENST00000540918 PKD2Q13563 968 aa13.06□□□□□ -0.32
TTC39C-203ENST00000540918 ZNF644Q9H582 1327 aaPredicted RBP13.06□□□□□ -0.32
TTC39C-203ENST00000540918 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
TTC39C-203ENST00000540918 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
TTC39C-203ENST00000540918 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
TTC39C-203ENST00000540918 ARHGAP35Q9NRY4 1499 aa13.03□□□□□ -0.32
TTC39C-203ENST00000540918 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
TTC39C-203ENST00000540918 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
TTC39C-203ENST00000540918 PPP1R15AO75807 674 aaPredicted RBP13.02□□□□□ -0.33
TTC39C-203ENST00000540918 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.33
TTC39C-203ENST00000540918 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
TTC39C-203ENST00000540918 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
TTC39C-203ENST00000540918 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
TTC39C-203ENST00000540918 CARMIL2Q6F5E8 1435 aa13.01□□□□□ -0.33
TTC39C-203ENST00000540918 CFTRP13569 1480 aa13.01□□□□□ -0.33
TTC39C-203ENST00000540918 MPHOSPH9Q99550 1183 aa13.01□□□□□ -0.33
TTC39C-203ENST00000540918 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
TTC39C-203ENST00000540918 NUP155O75694 1391 aa12.96□□□□□ -0.33
TTC39C-203ENST00000540918 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
TTC39C-203ENST00000540918 KIF3BO15066 747 aa12.96□□□□□ -0.34
TTC39C-203ENST00000540918 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
TTC39C-203ENST00000540918 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
TTC39C-203ENST00000540918 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
TTC39C-203ENST00000540918 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
TTC39C-203ENST00000540918 CUX1P39880 1505 aa12.94□□□□□ -0.34
TTC39C-203ENST00000540918 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
TTC39C-203ENST00000540918 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
TTC39C-203ENST00000540918 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
TTC39C-203ENST00000540918 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
TTC39C-203ENST00000540918 NEUROD2Q15784 382 aa12.93□□□□□ -0.34
TTC39C-203ENST00000540918 STK26Q9P289 416 aa12.93□□□□□ -0.34
TTC39C-203ENST00000540918 PTPRGP23470 1445 aa12.92□□□□□ -0.34
TTC39C-203ENST00000540918 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
TTC39C-203ENST00000540918 NEFMP07197 916 aa12.91□□□□□ -0.34
TTC39C-203ENST00000540918 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
TTC39C-203ENST00000540918 SOX12O15370 315 aa12.9□□□□□ -0.35
TTC39C-203ENST00000540918 KIF21BO75037 1637 aa12.89□□□□□ -0.35
TTC39C-203ENST00000540918 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
TTC39C-203ENST00000540918 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
TTC39C-203ENST00000540918 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
TTC39C-203ENST00000540918 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
TTC39C-203ENST00000540918 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
TTC39C-203ENST00000540918 POGKQ9P215 609 aa12.85□□□□□ -0.35
TTC39C-203ENST00000540918 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
TTC39C-203ENST00000540918 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
TTC39C-203ENST00000540918 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
TTC39C-203ENST00000540918 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
TTC39C-203ENST00000540918 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
TTC39C-203ENST00000540918 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
TTC39C-203ENST00000540918 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
TTC39C-203ENST00000540918 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
TTC39C-203ENST00000540918 A0A0G2JS52 829 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms