RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
LGR5-203ENST00000540815 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
LGR5-203ENST00000540815 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
LGR5-203ENST00000540815 TIAM1Q13009 1591 aa16.93■□□□□ 0.3
LGR5-203ENST00000540815 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
LGR5-203ENST00000540815 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
LGR5-203ENST00000540815 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
LGR5-203ENST00000540815 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
LGR5-203ENST00000540815 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
LGR5-203ENST00000540815 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
LGR5-203ENST00000540815 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
LGR5-203ENST00000540815 PCF11O94913 1555 aaKnown RBP16.87■□□□□ 0.29
LGR5-203ENST00000540815 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
LGR5-203ENST00000540815 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
LGR5-203ENST00000540815 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
LGR5-203ENST00000540815 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
LGR5-203ENST00000540815 LRRC9Q6ZRR7 1453 aa16.84■□□□□ 0.29
LGR5-203ENST00000540815 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.29
LGR5-203ENST00000540815 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
LGR5-203ENST00000540815 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
LGR5-203ENST00000540815 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
LGR5-203ENST00000540815 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
LGR5-203ENST00000540815 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
LGR5-203ENST00000540815 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
LGR5-203ENST00000540815 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
LGR5-203ENST00000540815 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
LGR5-203ENST00000540815 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
LGR5-203ENST00000540815 PHLDB1Q86UU1 1377 aa16.75■□□□□ 0.27
LGR5-203ENST00000540815 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
LGR5-203ENST00000540815 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
LGR5-203ENST00000540815 WDR62O43379 1518 aa16.71■□□□□ 0.27
LGR5-203ENST00000540815 ADAMTS12P58397 1594 aa16.71■□□□□ 0.27
LGR5-203ENST00000540815 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
LGR5-203ENST00000540815 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
LGR5-203ENST00000540815 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
LGR5-203ENST00000540815 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
LGR5-203ENST00000540815 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
LGR5-203ENST00000540815 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
LGR5-203ENST00000540815 ITGAEP38570 1179 aa16.66■□□□□ 0.26
LGR5-203ENST00000540815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
LGR5-203ENST00000540815 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
LGR5-203ENST00000540815 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
LGR5-203ENST00000540815 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
LGR5-203ENST00000540815 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.25
LGR5-203ENST00000540815 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
LGR5-203ENST00000540815 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
LGR5-203ENST00000540815 EHBP1L1Q8N3D4 1523 aa16.57■□□□□ 0.24
LGR5-203ENST00000540815 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
LGR5-203ENST00000540815 FGD6Q6ZV73 1430 aa16.56■□□□□ 0.24
LGR5-203ENST00000540815 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
LGR5-203ENST00000540815 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
LGR5-203ENST00000540815 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
LGR5-203ENST00000540815 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
LGR5-203ENST00000540815 MAGI3Q5TCQ9 1506 aa16.54■□□□□ 0.24
LGR5-203ENST00000540815 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
LGR5-203ENST00000540815 NCOA2Q15596 1464 aa16.53■□□□□ 0.24
LGR5-203ENST00000540815 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
LGR5-203ENST00000540815 MYOM3Q5VTT5 1437 aa16.5■□□□□ 0.23
LGR5-203ENST00000540815 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
LGR5-203ENST00000540815 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
LGR5-203ENST00000540815 MIER1Q8N108 512 aa16.49■□□□□ 0.23
LGR5-203ENST00000540815 DISP1Q96F81 1524 aa16.47■□□□□ 0.23
LGR5-203ENST00000540815 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
LGR5-203ENST00000540815 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
LGR5-203ENST00000540815 PTPRKQ15262 1439 aa16.47■□□□□ 0.23
LGR5-203ENST00000540815 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
LGR5-203ENST00000540815 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
LGR5-203ENST00000540815 CDK13Q14004 1512 aaKnown RBP16.46■□□□□ 0.22
LGR5-203ENST00000540815 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
LGR5-203ENST00000540815 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
LGR5-203ENST00000540815 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
LGR5-203ENST00000540815 TCOF1Q13428 1488 aaKnown RBP16.41■□□□□ 0.22
LGR5-203ENST00000540815 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
LGR5-203ENST00000540815 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
LGR5-203ENST00000540815 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
LGR5-203ENST00000540815 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
LGR5-203ENST00000540815 NAIPQ13075 1403 aa16.35■□□□□ 0.21
LGR5-203ENST00000540815 MIA2Q96PC5 1412 aa16.35■□□□□ 0.21
LGR5-203ENST00000540815 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
LGR5-203ENST00000540815 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
LGR5-203ENST00000540815 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
LGR5-203ENST00000540815 NUP160Q12769 1436 aa16.34■□□□□ 0.21
LGR5-203ENST00000540815 UACAQ9BZF9 1416 aa16.33■□□□□ 0.21
LGR5-203ENST00000540815 GCC2Q8IWJ2 1684 aa16.33■□□□□ 0.21
LGR5-203ENST00000540815 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
LGR5-203ENST00000540815 FBLN2P98095 1184 aa16.3■□□□□ 0.2
LGR5-203ENST00000540815 PLB1Q6P1J6 1458 aa16.28■□□□□ 0.2
LGR5-203ENST00000540815 CARMIL2Q6F5E8 1435 aa16.26■□□□□ 0.19
LGR5-203ENST00000540815 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
LGR5-203ENST00000540815 KDM6BO15054 1643 aa16.25■□□□□ 0.19
LGR5-203ENST00000540815 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
LGR5-203ENST00000540815 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
LGR5-203ENST00000540815 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
LGR5-203ENST00000540815 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
LGR5-203ENST00000540815 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
LGR5-203ENST00000540815 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
LGR5-203ENST00000540815 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
LGR5-203ENST00000540815 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
LGR5-203ENST00000540815 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
LGR5-203ENST00000540815 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms