RNA–Protein interactions for RNA: ENST00000540651.5

ARF1-213, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-213ENST00000540651 CTTNBP2Q8WZ74 1663 aa36.14■■■■□ 3.38
ARF1-213ENST00000540651 CLIP1P30622 1438 aa36.13■■■■□ 3.37
ARF1-213ENST00000540651 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
ARF1-213ENST00000540651 CHD1O14646 1710 aa36.05■■■■□ 3.36
ARF1-213ENST00000540651 NUP160Q12769 1436 aa36.03■■■■□ 3.36
ARF1-213ENST00000540651 ARHGAP35Q9NRY4 1499 aa35.98■■■■□ 3.35
ARF1-213ENST00000540651 KIAA0586Q9BVV6 1533 aa35.98■■■■□ 3.35
ARF1-213ENST00000540651 IQGAP2Q13576 1575 aa35.95■■■■□ 3.35
ARF1-213ENST00000540651 ARAP1Q96P48 1450 aa35.89■■■■□ 3.34
ARF1-213ENST00000540651 P3H3Q8IVL6 736 aa35.84■■■■□ 3.33
ARF1-213ENST00000540651 SAMD9Q5K651 1589 aa35.8■■■■□ 3.32
ARF1-213ENST00000540651 UGGT2Q9NYU1 1516 aa35.8■■■■□ 3.32
ARF1-213ENST00000540651 EFCAB5A4FU69 1503 aa35.79■■■■□ 3.32
ARF1-213ENST00000540651 FHOD3Q2V2M9 1422 aa35.75■■■■□ 3.31
ARF1-213ENST00000540651 JPH4Q96JJ6 628 aa35.73■■■■□ 3.31
ARF1-213ENST00000540651 VPS8Q8N3P4 1428 aa35.73■■■■□ 3.31
ARF1-213ENST00000540651 DISP1Q96F81 1524 aa35.7■■■■□ 3.31
ARF1-213ENST00000540651 CLASP1Q7Z460 1538 aa35.68■■■■□ 3.3
ARF1-213ENST00000540651 KIAA0556O60303 1618 aa35.62■■■■□ 3.29
ARF1-213ENST00000540651 SHROOM2Q13796 1616 aa35.58■■■■□ 3.29
ARF1-213ENST00000540651 PRG4Q92954 1404 aaPredicted RBP35.55■■■■□ 3.28
ARF1-213ENST00000540651 OSCARQ8IYS5 282 aa35.55■■■■□ 3.28
ARF1-213ENST00000540651 CARMIL2Q6F5E8 1435 aa35.49■■■■□ 3.27
ARF1-213ENST00000540651 FMN1Q68DA7 1419 aa35.48■■■■□ 3.27
ARF1-213ENST00000540651 ERCC6L2Q5T890 1561 aa35.46■■■■□ 3.27
ARF1-213ENST00000540651 PCF11O94913 1555 aaKnown RBP35.45■■■■□ 3.27
ARF1-213ENST00000540651 TTBK1Q5TCY1 1321 aaPredicted RBP35.43■■■■□ 3.26
ARF1-213ENST00000540651 PPARGC1BQ86YN6 1023 aaKnown RBP35.42■■■■□ 3.26
ARF1-213ENST00000540651 CASKIN1Q8WXD9 1431 aa35.39■■■■□ 3.26
ARF1-213ENST00000540651 FYCO1Q9BQS8 1478 aa35.33■■■■□ 3.25
ARF1-213ENST00000540651 ATP1B4Q9UN42 357 aaPredicted RBP35.31■■■■□ 3.24
ARF1-213ENST00000540651 PTPRGP23470 1445 aa35.25■■■■□ 3.23
ARF1-213ENST00000540651 PLB1Q6P1J6 1458 aa35.25■■■■□ 3.23
ARF1-213ENST00000540651 APLP2Q06481 763 aa35.25■■■■□ 3.23
ARF1-213ENST00000540651 LRRIQ1Q96JM4 1722 aa35.22■■■■□ 3.23
ARF1-213ENST00000540651 KANK4Q5T7N3 995 aaPredicted RBP35.22■■■■□ 3.23
ARF1-213ENST00000540651 RAPGEF6Q8TEU7 1601 aa35.19■■■■□ 3.22
ARF1-213ENST00000540651 TIAM1Q13009 1591 aa35.19■■■■□ 3.22
ARF1-213ENST00000540651 MAP3K1Q13233 1512 aa35.16■■■■□ 3.22
ARF1-213ENST00000540651 NUP153P49790 1475 aaKnown RBP35.16■■■■□ 3.22
ARF1-213ENST00000540651 ABCA8O94911 1581 aa35.16■■■■□ 3.22
ARF1-213ENST00000540651 HECW1Q76N89 1606 aa35.15■■■■□ 3.22
ARF1-213ENST00000540651 ARID3CA6NKF2 412 aa35.12■■■■□ 3.21
ARF1-213ENST00000540651 CFAP43Q8NDM7 1665 aa35.12■■■■□ 3.21
ARF1-213ENST00000540651 EPRSP07814 1512 aaKnown RBP35.1■■■■□ 3.21
ARF1-213ENST00000540651 CDK13Q14004 1512 aaKnown RBP35.07■■■■□ 3.21
ARF1-213ENST00000540651 UACAQ9BZF9 1416 aa35.04■■■■□ 3.2
ARF1-213ENST00000540651 LRRC9Q6ZRR7 1453 aa35.04■■■■□ 3.2
ARF1-213ENST00000540651 CCDC18Q5T9S5 1454 aa35.03■■■■□ 3.2
ARF1-213ENST00000540651 ARHGEF11O15085 1522 aa34.99■■■■□ 3.19
ARF1-213ENST00000540651 MAGI3Q5TCQ9 1506 aa34.97■■■■□ 3.19
ARF1-213ENST00000540651 ABCC2Q92887 1545 aa34.94■■■■□ 3.18
ARF1-213ENST00000540651 ATP10BO94823 1461 aa34.94■■■■□ 3.18
ARF1-213ENST00000540651 UHRF1BP1LA0JNW5 1464 aa34.88■■■■□ 3.17
ARF1-213ENST00000540651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.88■■■■□ 3.17
ARF1-213ENST00000540651 HNRNPUL2Q1KMD3 747 aaKnown RBP34.88■■■■□ 3.17
ARF1-213ENST00000540651 MTUS2Q5JR59 1369 aa34.88■■■■□ 3.17
ARF1-213ENST00000540651 TRIM26Q12899 539 aaPredicted RBP34.87■■■■□ 3.17
ARF1-213ENST00000540651 RIMBP3CA6NJZ7 1639 aa34.85■■■■□ 3.17
ARF1-213ENST00000540651 RIMBP3BA6NNM3 1639 aa34.85■■■■□ 3.17
ARF1-213ENST00000540651 RIMBP3Q9UFD9 1639 aa34.85■■■■□ 3.17
ARF1-213ENST00000540651 ADCY10Q96PN6 1610 aa34.83■■■■□ 3.17
ARF1-213ENST00000540651 EHBP1L1Q8N3D4 1523 aa34.81■■■■□ 3.16
ARF1-213ENST00000540651 PCGF6Q9BYE7 350 aa34.77■■■■□ 3.16
ARF1-213ENST00000540651 KDM5BQ9UGL1 1544 aa34.76■■■■□ 3.16
ARF1-213ENST00000540651 PHLDB1Q86UU1 1377 aa34.75■■■■□ 3.15
ARF1-213ENST00000540651 CDK11AQ9UQ88 783 aaPredicted RBP34.74■■■■□ 3.15
ARF1-213ENST00000540651 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
ARF1-213ENST00000540651 ZCCHC11Q5TAX3 1644 aaKnown RBP34.71■■■■□ 3.15
ARF1-213ENST00000540651 NCOA2Q15596 1464 aa34.71■■■■□ 3.15
ARF1-213ENST00000540651 PLEKHD1A6NEE1 506 aa34.68■■■■□ 3.14
ARF1-213ENST00000540651 CYB5RLQ6IPT4 315 aa34.68■■■■□ 3.14
ARF1-213ENST00000540651 SUPT6HQ7KZ85 1726 aaKnown RBP34.68■■■■□ 3.14
ARF1-213ENST00000540651 HRCP23327 699 aa34.65■■■■□ 3.14
ARF1-213ENST00000540651 KIF14Q15058 1648 aa34.61■■■■□ 3.13
ARF1-213ENST00000540651 RRBP1Q9P2E9 1410 aaKnown RBP34.59■■■■□ 3.13
ARF1-213ENST00000540651 MYOM3Q5VTT5 1437 aa34.52■■■■□ 3.12
ARF1-213ENST00000540651 CCNB3Q8WWL7 1395 aa34.5■■■■□ 3.11
ARF1-213ENST00000540651 ABCC10Q5T3U5 1492 aa34.49■■■■□ 3.11
ARF1-213ENST00000540651 FGD6Q6ZV73 1430 aa34.48■■■■□ 3.11
ARF1-213ENST00000540651 NPM1P06748 294 aaKnown RBP eCLIP34.45■■■■□ 3.11
ARF1-213ENST00000540651 KCNH8Q96L42 1107 aa34.45■■■■□ 3.11
ARF1-213ENST00000540651 ASXL2Q76L83 1435 aa34.44■■■■□ 3.1
ARF1-213ENST00000540651 WDR7Q9Y4E6 1490 aa34.43■■■■□ 3.1
ARF1-213ENST00000540651 GPATCH8Q9UKJ3 1502 aaKnown RBP34.41■■■■□ 3.1
ARF1-213ENST00000540651 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.39■■■■□ 3.11e-15■□□□□ 8.1
ARF1-213ENST00000540651 TTC37Q6PGP7 1564 aa34.36■■■■□ 3.09
ARF1-213ENST00000540651 FAM50AQ14320 339 aaKnown RBP34.35■■■■□ 3.09
ARF1-213ENST00000540651 MIA2Q96PC5 1412 aa34.35■■■■□ 3.09
ARF1-213ENST00000540651 CDC42BPAQ5VT25 1732 aa34.33■■■■□ 3.09
ARF1-213ENST00000540651 PTPN23Q9H3S7 1636 aa34.32■■■■□ 3.08
ARF1-213ENST00000540651 TCOF1Q13428 1488 aaKnown RBP34.29■■■■□ 3.08
ARF1-213ENST00000540651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.29■■■■□ 3.082e-7■■□□□ 13.4
ARF1-213ENST00000540651 ZNF644Q9H582 1327 aaPredicted RBP34.28■■■■□ 3.08
ARF1-213ENST00000540651 ITSN2Q9NZM3 1697 aa34.28■■■■□ 3.08
ARF1-213ENST00000540651 CFDP1Q9UEE9 299 aaPredicted RBP34.27■■■■□ 3.08
ARF1-213ENST00000540651 MAPKBP1O60336 1514 aa34.27■■■■□ 3.08
ARF1-213ENST00000540651 DNAJC5Q9H3Z4 198 aa34.26■■■■□ 3.08
ARF1-213ENST00000540651 ITGAEP38570 1179 aa34.25■■■■□ 3.07
ARF1-213ENST00000540651 CDC42BPBQ9Y5S2 1711 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms