RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
USP10-202ENST00000540269 ITGAEP38570 1179 aa18.44■□□□□ 0.54
USP10-202ENST00000540269 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
USP10-202ENST00000540269 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
USP10-202ENST00000540269 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
USP10-202ENST00000540269 CUL7Q14999 1698 aa18.41■□□□□ 0.54
USP10-202ENST00000540269 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
USP10-202ENST00000540269 PHLDB1Q86UU1 1377 aa18.4■□□□□ 0.54
USP10-202ENST00000540269 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.54
USP10-202ENST00000540269 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
USP10-202ENST00000540269 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
USP10-202ENST00000540269 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
USP10-202ENST00000540269 CTTNBP2Q8WZ74 1663 aa18.36■□□□□ 0.53
USP10-202ENST00000540269 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
USP10-202ENST00000540269 CFAP43Q8NDM7 1665 aa18.35■□□□□ 0.53
USP10-202ENST00000540269 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.52
USP10-202ENST00000540269 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
USP10-202ENST00000540269 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
USP10-202ENST00000540269 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
USP10-202ENST00000540269 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
USP10-202ENST00000540269 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
USP10-202ENST00000540269 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
USP10-202ENST00000540269 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
USP10-202ENST00000540269 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
USP10-202ENST00000540269 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.519e-7■■■■■ 27.8
USP10-202ENST00000540269 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
USP10-202ENST00000540269 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
USP10-202ENST00000540269 MIER1Q8N108 512 aa18.24■□□□□ 0.51
USP10-202ENST00000540269 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
USP10-202ENST00000540269 LRRIQ1Q96JM4 1722 aa18.21■□□□□ 0.51
USP10-202ENST00000540269 FMN1Q68DA7 1419 aa18.21■□□□□ 0.51
USP10-202ENST00000540269 SETD5Q9C0A6 1442 aa18.2■□□□□ 0.5
USP10-202ENST00000540269 MYT1Q01538 1121 aa18.17■□□□□ 0.5
USP10-202ENST00000540269 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
USP10-202ENST00000540269 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
USP10-202ENST00000540269 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
USP10-202ENST00000540269 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
USP10-202ENST00000540269 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
USP10-202ENST00000540269 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
USP10-202ENST00000540269 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
USP10-202ENST00000540269 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
USP10-202ENST00000540269 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
USP10-202ENST00000540269 PTPRKQ15262 1439 aa18.1■□□□□ 0.49
USP10-202ENST00000540269 MAGI3Q5TCQ9 1506 aa18.09■□□□□ 0.49
USP10-202ENST00000540269 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
USP10-202ENST00000540269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.07■□□□□ 0.48
USP10-202ENST00000540269 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
USP10-202ENST00000540269 IQGAP2Q13576 1575 aa18.05■□□□□ 0.48
USP10-202ENST00000540269 WDR62O43379 1518 aa18.03■□□□□ 0.48
USP10-202ENST00000540269 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
USP10-202ENST00000540269 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
USP10-202ENST00000540269 ARID3CA6NKF2 412 aa18.02■□□□□ 0.48
USP10-202ENST00000540269 IFT140Q96RY7 1462 aa18.02■□□□□ 0.47
USP10-202ENST00000540269 MYOM3Q5VTT5 1437 aa18.02■□□□□ 0.47
USP10-202ENST00000540269 EHBP1L1Q8N3D4 1523 aa18■□□□□ 0.47
USP10-202ENST00000540269 SUPT6HQ7KZ85 1726 aaKnown RBP17.99■□□□□ 0.47
USP10-202ENST00000540269 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
USP10-202ENST00000540269 CDK13Q14004 1512 aaKnown RBP17.98■□□□□ 0.47
USP10-202ENST00000540269 UGGT2Q9NYU1 1516 aa17.98■□□□□ 0.47
USP10-202ENST00000540269 EPRSP07814 1512 aaKnown RBP17.97■□□□□ 0.47
USP10-202ENST00000540269 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
USP10-202ENST00000540269 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
USP10-202ENST00000540269 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
USP10-202ENST00000540269 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
USP10-202ENST00000540269 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
USP10-202ENST00000540269 NAIPQ13075 1403 aa17.94■□□□□ 0.46
USP10-202ENST00000540269 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
USP10-202ENST00000540269 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
USP10-202ENST00000540269 KIAA0586Q9BVV6 1533 aa17.9■□□□□ 0.46
USP10-202ENST00000540269 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
USP10-202ENST00000540269 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
USP10-202ENST00000540269 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
USP10-202ENST00000540269 RRP7BPQ9NSQ0 103 aa17.88■□□□□ 0.45
USP10-202ENST00000540269 TCOF1Q13428 1488 aaKnown RBP17.87■□□□□ 0.45
USP10-202ENST00000540269 UACAQ9BZF9 1416 aa17.87■□□□□ 0.45
USP10-202ENST00000540269 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
USP10-202ENST00000540269 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
USP10-202ENST00000540269 NUP153P49790 1475 aaKnown RBP17.84■□□□□ 0.45
USP10-202ENST00000540269 KDM6BO15054 1643 aa17.83■□□□□ 0.45
USP10-202ENST00000540269 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
USP10-202ENST00000540269 DENND4BO75064 1496 aaPredicted RBP17.81■□□□□ 0.44
USP10-202ENST00000540269 TIMELESSQ9UNS1 1208 aa17.8■□□□□ 0.44
USP10-202ENST00000540269 FBLN2P98095 1184 aa17.8■□□□□ 0.44
USP10-202ENST00000540269 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
USP10-202ENST00000540269 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
USP10-202ENST00000540269 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
USP10-202ENST00000540269 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
USP10-202ENST00000540269 RAPGEF6Q8TEU7 1601 aa17.78■□□□□ 0.44
USP10-202ENST00000540269 MIA2Q96PC5 1412 aa17.77■□□□□ 0.44
USP10-202ENST00000540269 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
USP10-202ENST00000540269 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.43
USP10-202ENST00000540269 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
USP10-202ENST00000540269 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
USP10-202ENST00000540269 GCC2Q8IWJ2 1684 aa17.75■□□□□ 0.43
USP10-202ENST00000540269 KDM5BQ9UGL1 1544 aa17.75■□□□□ 0.43
USP10-202ENST00000540269 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
USP10-202ENST00000540269 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
USP10-202ENST00000540269 AKNAQ7Z591 1439 aa17.71■□□□□ 0.43
USP10-202ENST00000540269 NUP160Q12769 1436 aa17.71■□□□□ 0.43
USP10-202ENST00000540269 ABCC5O15440 1437 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms