RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
CCDC130-202ENST00000540216 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
CCDC130-202ENST00000540216 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
CCDC130-202ENST00000540216 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
CCDC130-202ENST00000540216 EEA1Q15075 1411 aa22.53■■□□□ 1.2
CCDC130-202ENST00000540216 PRXQ9BXM0 1461 aa22.5■■□□□ 1.19
CCDC130-202ENST00000540216 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
CCDC130-202ENST00000540216 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
CCDC130-202ENST00000540216 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
CCDC130-202ENST00000540216 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.17
CCDC130-202ENST00000540216 CARMIL2Q6F5E8 1435 aa22.38■■□□□ 1.17
CCDC130-202ENST00000540216 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
CCDC130-202ENST00000540216 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
CCDC130-202ENST00000540216 DISP1Q96F81 1524 aa22.29■■□□□ 1.16
CCDC130-202ENST00000540216 KIF21BO75037 1637 aa22.28■■□□□ 1.16
CCDC130-202ENST00000540216 PTPRGP23470 1445 aa22.27■■□□□ 1.16
CCDC130-202ENST00000540216 FAM9AQ8IZU1 332 aaPredicted RBP22.26■■□□□ 1.15
CCDC130-202ENST00000540216 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
CCDC130-202ENST00000540216 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
CCDC130-202ENST00000540216 ADCY10Q96PN6 1610 aa22.21■■□□□ 1.15
CCDC130-202ENST00000540216 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
CCDC130-202ENST00000540216 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCDC130-202ENST00000540216 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
CCDC130-202ENST00000540216 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
CCDC130-202ENST00000540216 MAPKBP1O60336 1514 aa22.13■■□□□ 1.13
CCDC130-202ENST00000540216 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
CCDC130-202ENST00000540216 ABCC2Q92887 1545 aa22.11■■□□□ 1.13
CCDC130-202ENST00000540216 SAMD9Q5K651 1589 aa22.1■■□□□ 1.13
CCDC130-202ENST00000540216 EFCAB5A4FU69 1503 aa22.02■■□□□ 1.12
CCDC130-202ENST00000540216 KDM5BQ9UGL1 1544 aa22.02■■□□□ 1.12
CCDC130-202ENST00000540216 ABCA8O94911 1581 aa22.02■■□□□ 1.12
CCDC130-202ENST00000540216 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
CCDC130-202ENST00000540216 PLB1Q6P1J6 1458 aa22.01■■□□□ 1.11
CCDC130-202ENST00000540216 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
CCDC130-202ENST00000540216 KIF13AQ9H1H9 1805 aa21.98■■□□□ 1.11
CCDC130-202ENST00000540216 DIP2BQ9P265 1576 aa21.96■■□□□ 1.11
CCDC130-202ENST00000540216 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
CCDC130-202ENST00000540216 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
CCDC130-202ENST00000540216 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
CCDC130-202ENST00000540216 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
CCDC130-202ENST00000540216 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
CCDC130-202ENST00000540216 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
CCDC130-202ENST00000540216 FAM69CQ0P6D2 419 aa21.91■■□□□ 1.1
CCDC130-202ENST00000540216 RAPGEF6Q8TEU7 1601 aa21.89■■□□□ 1.09
CCDC130-202ENST00000540216 GLI2P10070 1586 aa21.86■■□□□ 1.09
CCDC130-202ENST00000540216 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
CCDC130-202ENST00000540216 WDR7Q9Y4E6 1490 aa21.84■■□□□ 1.09
CCDC130-202ENST00000540216 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
CCDC130-202ENST00000540216 ATP10BO94823 1461 aa21.81■■□□□ 1.08
CCDC130-202ENST00000540216 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
CCDC130-202ENST00000540216 NUP153P49790 1475 aaKnown RBP21.8■■□□□ 1.08
CCDC130-202ENST00000540216 MAP3K4Q9Y6R4 1608 aa21.74■■□□□ 1.07
CCDC130-202ENST00000540216 ARID3CA6NKF2 412 aa21.72■■□□□ 1.07
CCDC130-202ENST00000540216 TSPOAP1O95153 1857 aa21.71■■□□□ 1.07
CCDC130-202ENST00000540216 CLIP1P30622 1438 aa21.71■■□□□ 1.07
CCDC130-202ENST00000540216 HECW1Q76N89 1606 aa21.7■■□□□ 1.06
CCDC130-202ENST00000540216 PPRC1Q5VV67 1664 aaKnown RBP21.69■■□□□ 1.06
CCDC130-202ENST00000540216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
CCDC130-202ENST00000540216 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
CCDC130-202ENST00000540216 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
CCDC130-202ENST00000540216 CFAP43Q8NDM7 1665 aa21.68■■□□□ 1.06
CCDC130-202ENST00000540216 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
CCDC130-202ENST00000540216 KDM6BO15054 1643 aa21.63■■□□□ 1.05
CCDC130-202ENST00000540216 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
CCDC130-202ENST00000540216 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
CCDC130-202ENST00000540216 MAGI3Q5TCQ9 1506 aa21.62■■□□□ 1.05
CCDC130-202ENST00000540216 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
CCDC130-202ENST00000540216 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
CCDC130-202ENST00000540216 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
CCDC130-202ENST00000540216 PCF11O94913 1555 aaKnown RBP21.6■■□□□ 1.05
CCDC130-202ENST00000540216 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
CCDC130-202ENST00000540216 ATP1B4Q9UN42 357 aaPredicted RBP21.58■■□□□ 1.05
CCDC130-202ENST00000540216 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.04
CCDC130-202ENST00000540216 CCDC18Q5T9S5 1454 aa21.57■■□□□ 1.04
CCDC130-202ENST00000540216 CDK11AQ9UQ88 783 aaPredicted RBP21.55■■□□□ 1.04
CCDC130-202ENST00000540216 LRRIQ1Q96JM4 1722 aa21.52■■□□□ 1.04
CCDC130-202ENST00000540216 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
CCDC130-202ENST00000540216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.49■■□□□ 1.03
CCDC130-202ENST00000540216 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
CCDC130-202ENST00000540216 TROQ12816 1431 aaPredicted RBP21.48■■□□□ 1.03
CCDC130-202ENST00000540216 NEO1Q92859 1461 aa21.46■■□□□ 1.03
CCDC130-202ENST00000540216 COL17A1Q9UMD9 1497 aaPredicted RBP21.46■■□□□ 1.03
CCDC130-202ENST00000540216 TTC37Q6PGP7 1564 aa21.46■■□□□ 1.03
CCDC130-202ENST00000540216 KIF14Q15058 1648 aa21.46■■□□□ 1.03
CCDC130-202ENST00000540216 ARAP3Q8WWN8 1544 aa21.45■■□□□ 1.02
CCDC130-202ENST00000540216 CFAP74Q9C0B2 1584 aa21.42■■□□□ 1.02
CCDC130-202ENST00000540216 FANCAO15360 1455 aa21.39■■□□□ 1.01
CCDC130-202ENST00000540216 PLCH2O75038 1416 aa21.38■■□□□ 1.01
CCDC130-202ENST00000540216 MYO5CQ9NQX4 1742 aa21.37■■□□□ 1.01
CCDC130-202ENST00000540216 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
CCDC130-202ENST00000540216 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
CCDC130-202ENST00000540216 DENND4BO75064 1496 aaPredicted RBP21.29■■□□□ 1
CCDC130-202ENST00000540216 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
CCDC130-202ENST00000540216 EFCAB2Q5VUJ9 269 aa21.28■■□□□ 1
CCDC130-202ENST00000540216 PREX2Q70Z35 1606 aa21.28■■□□□ 1
CCDC130-202ENST00000540216 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
CCDC130-202ENST00000540216 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
CCDC130-202ENST00000540216 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
CCDC130-202ENST00000540216 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
CCDC130-202ENST00000540216 RICTORQ6R327 1708 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms