RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 CUL7Q14999 1698 aa25.12■■□□□ 1.61
SEMA4D-222ENST00000540183 IGF1RP08069 1367 aa25.11■■□□□ 1.61
SEMA4D-222ENST00000540183 ADCY10Q96PN6 1610 aa25.09■■□□□ 1.61
SEMA4D-222ENST00000540183 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
SEMA4D-222ENST00000540183 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
SEMA4D-222ENST00000540183 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
SEMA4D-222ENST00000540183 DIP2BQ9P265 1576 aa24.98■■□□□ 1.59
SEMA4D-222ENST00000540183 MAPKBP1O60336 1514 aa24.98■■□□□ 1.59
SEMA4D-222ENST00000540183 ABCC10Q5T3U5 1492 aa24.97■■□□□ 1.59
SEMA4D-222ENST00000540183 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.58
SEMA4D-222ENST00000540183 TSPOAP1O95153 1857 aa24.94■■□□□ 1.58
SEMA4D-222ENST00000540183 NPM1P06748 294 aaKnown RBP eCLIP24.93■■□□□ 1.58
SEMA4D-222ENST00000540183 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
SEMA4D-222ENST00000540183 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
SEMA4D-222ENST00000540183 IQGAP2Q13576 1575 aa24.85■■□□□ 1.57
SEMA4D-222ENST00000540183 PTPRGP23470 1445 aa24.83■■□□□ 1.57
SEMA4D-222ENST00000540183 KDM6BO15054 1643 aa24.78■■□□□ 1.56
SEMA4D-222ENST00000540183 TNIKQ9UKE5 1360 aa24.78■■□□□ 1.56
SEMA4D-222ENST00000540183 CARMIL2Q6F5E8 1435 aa24.77■■□□□ 1.56
SEMA4D-222ENST00000540183 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
SEMA4D-222ENST00000540183 ABCC2Q92887 1545 aa24.74■■□□□ 1.55
SEMA4D-222ENST00000540183 PPRC1Q5VV67 1664 aaKnown RBP24.71■■□□□ 1.55
SEMA4D-222ENST00000540183 RAPGEF2Q9Y4G8 1499 aa24.7■■□□□ 1.55
SEMA4D-222ENST00000540183 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
SEMA4D-222ENST00000540183 UHRF1BP1LA0JNW5 1464 aa24.66■■□□□ 1.54
SEMA4D-222ENST00000540183 UGGT2Q9NYU1 1516 aa24.66■■□□□ 1.54
SEMA4D-222ENST00000540183 KIAA0556O60303 1618 aa24.65■■□□□ 1.54
SEMA4D-222ENST00000540183 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
SEMA4D-222ENST00000540183 CTTNBP2Q8WZ74 1663 aa24.65■■□□□ 1.54
SEMA4D-222ENST00000540183 GLI2P10070 1586 aa24.63■■□□□ 1.53
SEMA4D-222ENST00000540183 ZCCHC11Q5TAX3 1644 aaKnown RBP24.62■■□□□ 1.53
SEMA4D-222ENST00000540183 PLB1Q6P1J6 1458 aa24.61■■□□□ 1.53
SEMA4D-222ENST00000540183 KDM5BQ9UGL1 1544 aa24.57■■□□□ 1.52
SEMA4D-222ENST00000540183 MAP3K4Q9Y6R4 1608 aa24.55■■□□□ 1.52
SEMA4D-222ENST00000540183 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
SEMA4D-222ENST00000540183 EPRSP07814 1512 aaKnown RBP24.54■■□□□ 1.52
SEMA4D-222ENST00000540183 COL17A1Q9UMD9 1497 aaPredicted RBP24.47■■□□□ 1.51
SEMA4D-222ENST00000540183 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
SEMA4D-222ENST00000540183 ABCA8O94911 1581 aa24.42■■□□□ 1.5
SEMA4D-222ENST00000540183 WDR7Q9Y4E6 1490 aa24.41■■□□□ 1.5
SEMA4D-222ENST00000540183 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
SEMA4D-222ENST00000540183 TEX14Q8IWB6 1497 aa24.37■■□□□ 1.49
SEMA4D-222ENST00000540183 ADGRL1O94910 1474 aa24.35■■□□□ 1.49
SEMA4D-222ENST00000540183 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
SEMA4D-222ENST00000540183 KCNH8Q96L42 1107 aa24.31■■□□□ 1.48
SEMA4D-222ENST00000540183 P3H3Q8IVL6 736 aa24.28■■□□□ 1.48
SEMA4D-222ENST00000540183 ARID3CA6NKF2 412 aa24.27■■□□□ 1.48
SEMA4D-222ENST00000540183 CD109Q6YHK3 1445 aa24.26■■□□□ 1.47
SEMA4D-222ENST00000540183 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
SEMA4D-222ENST00000540183 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
SEMA4D-222ENST00000540183 ATP10BO94823 1461 aa24.19■■□□□ 1.46
SEMA4D-222ENST00000540183 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
SEMA4D-222ENST00000540183 RAPGEF6Q8TEU7 1601 aa24.16■■□□□ 1.46
SEMA4D-222ENST00000540183 KIF21BO75037 1637 aa24.15■■□□□ 1.46
SEMA4D-222ENST00000540183 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
SEMA4D-222ENST00000540183 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
SEMA4D-222ENST00000540183 HECW2Q9P2P5 1572 aa24.08■■□□□ 1.45
SEMA4D-222ENST00000540183 ARAP3Q8WWN8 1544 aa24.06■■□□□ 1.44
SEMA4D-222ENST00000540183 FHOD3Q2V2M9 1422 aa24.04■■□□□ 1.44
SEMA4D-222ENST00000540183 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
SEMA4D-222ENST00000540183 NUP153P49790 1475 aaKnown RBP24.03■■□□□ 1.44
SEMA4D-222ENST00000540183 EEA1Q15075 1411 aa24.01■■□□□ 1.43
SEMA4D-222ENST00000540183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
SEMA4D-222ENST00000540183 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
SEMA4D-222ENST00000540183 FRMPD1Q5SYB0 1578 aa23.97■■□□□ 1.43
SEMA4D-222ENST00000540183 RAPGEF3O95398 923 aa23.95■■□□□ 1.42
SEMA4D-222ENST00000540183 NEO1Q92859 1461 aa23.92■■□□□ 1.42
SEMA4D-222ENST00000540183 ILDR1Q86SU0 546 aaPredicted RBP23.91■■□□□ 1.42
SEMA4D-222ENST00000540183 ADAMTSL3P82987 1691 aa23.91■■□□□ 1.42
SEMA4D-222ENST00000540183 PHLDB1Q86UU1 1377 aa23.9■■□□□ 1.42
SEMA4D-222ENST00000540183 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.41
SEMA4D-222ENST00000540183 RICTORQ6R327 1708 aa23.87■■□□□ 1.41
SEMA4D-222ENST00000540183 TTC37Q6PGP7 1564 aa23.87■■□□□ 1.41
SEMA4D-222ENST00000540183 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
SEMA4D-222ENST00000540183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.86■■□□□ 1.41
SEMA4D-222ENST00000540183 BCORL1Q5H9F3 1711 aa23.86■■□□□ 1.41
SEMA4D-222ENST00000540183 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
SEMA4D-222ENST00000540183 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
SEMA4D-222ENST00000540183 MADDQ8WXG6 1647 aa23.81■■□□□ 1.4
SEMA4D-222ENST00000540183 PTPRMP28827 1452 aa23.81■■□□□ 1.4
SEMA4D-222ENST00000540183 ARHGEF40Q8TER5 1519 aa23.8■■□□□ 1.4
SEMA4D-222ENST00000540183 CFAP74Q9C0B2 1584 aa23.79■■□□□ 1.4
SEMA4D-222ENST00000540183 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
SEMA4D-222ENST00000540183 FANCAO15360 1455 aa23.78■■□□□ 1.4
SEMA4D-222ENST00000540183 SIGLEC1Q9BZZ2 1709 aa23.78■■□□□ 1.4
SEMA4D-222ENST00000540183 DENND4BO75064 1496 aaPredicted RBP23.77■■□□□ 1.4
SEMA4D-222ENST00000540183 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
SEMA4D-222ENST00000540183 ARID4BQ4LE39 1312 aaPredicted RBP23.75■■□□□ 1.39
SEMA4D-222ENST00000540183 LRRIQ1Q96JM4 1722 aa23.72■■□□□ 1.39
SEMA4D-222ENST00000540183 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
SEMA4D-222ENST00000540183 HECW1Q76N89 1606 aa23.7■■□□□ 1.39
SEMA4D-222ENST00000540183 ARHGAP35Q9NRY4 1499 aa23.7■■□□□ 1.38
SEMA4D-222ENST00000540183 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
SEMA4D-222ENST00000540183 MYO5CQ9NQX4 1742 aa23.69■■□□□ 1.38
SEMA4D-222ENST00000540183 ATP1B4Q9UN42 357 aaPredicted RBP23.68■■□□□ 1.38
SEMA4D-222ENST00000540183 ZFYVE16Q7Z3T8 1539 aa23.68■■□□□ 1.38
SEMA4D-222ENST00000540183 YEATS2Q9ULM3 1422 aa23.67■■□□□ 1.38
SEMA4D-222ENST00000540183 KIF14Q15058 1648 aa23.67■■□□□ 1.38
SEMA4D-222ENST00000540183 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
SEMA4D-222ENST00000540183 PLCH2O75038 1416 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms