RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 KIAA0586Q9BVV6 1533 aa25.08■■□□□ 1.61
DDB1-216ENST00000539739 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
DDB1-216ENST00000539739 LOC105371045A0A1W2PR82 267 aa25.01■■□□□ 1.59
DDB1-216ENST00000539739 CTTNBP2Q8WZ74 1663 aa25■■□□□ 1.59
DDB1-216ENST00000539739 IQGAP2Q13576 1575 aa24.99■■□□□ 1.59
DDB1-216ENST00000539739 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
DDB1-216ENST00000539739 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.58
DDB1-216ENST00000539739 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
DDB1-216ENST00000539739 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
DDB1-216ENST00000539739 UGGT2Q9NYU1 1516 aa24.87■■□□□ 1.57
DDB1-216ENST00000539739 PRG4Q92954 1404 aaPredicted RBP24.87■■□□□ 1.57
DDB1-216ENST00000539739 CARMIL2Q6F5E8 1435 aa24.84■■□□□ 1.57
DDB1-216ENST00000539739 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
DDB1-216ENST00000539739 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
DDB1-216ENST00000539739 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
DDB1-216ENST00000539739 EFCAB5A4FU69 1503 aa24.74■■□□□ 1.55
DDB1-216ENST00000539739 CLIP1P30622 1438 aa24.73■■□□□ 1.55
DDB1-216ENST00000539739 CEP162Q5TB80 1403 aa24.73■■□□□ 1.55
DDB1-216ENST00000539739 P3H3Q8IVL6 736 aa24.73■■□□□ 1.55
DDB1-216ENST00000539739 KIAA0556O60303 1618 aa24.73■■□□□ 1.55
DDB1-216ENST00000539739 ERCC6L2Q5T890 1561 aa24.73■■□□□ 1.55
DDB1-216ENST00000539739 SAMD9Q5K651 1589 aa24.71■■□□□ 1.55
DDB1-216ENST00000539739 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
DDB1-216ENST00000539739 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
DDB1-216ENST00000539739 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
DDB1-216ENST00000539739 ARHGAP35Q9NRY4 1499 aa24.68■■□□□ 1.54
DDB1-216ENST00000539739 PTPRGP23470 1445 aa24.66■■□□□ 1.54
DDB1-216ENST00000539739 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
DDB1-216ENST00000539739 FHOD3Q2V2M9 1422 aa24.64■■□□□ 1.54
DDB1-216ENST00000539739 ARAP1Q96P48 1450 aa24.59■■□□□ 1.53
DDB1-216ENST00000539739 CYB5RLQ6IPT4 315 aa24.57■■□□□ 1.52
DDB1-216ENST00000539739 FMN1Q68DA7 1419 aa24.54■■□□□ 1.52
DDB1-216ENST00000539739 UACAQ9BZF9 1416 aa24.49■■□□□ 1.51
DDB1-216ENST00000539739 PLB1Q6P1J6 1458 aa24.46■■□□□ 1.51
DDB1-216ENST00000539739 ABCA8O94911 1581 aa24.42■■□□□ 1.5
DDB1-216ENST00000539739 UHRF1BP1LA0JNW5 1464 aa24.41■■□□□ 1.5
DDB1-216ENST00000539739 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
DDB1-216ENST00000539739 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
DDB1-216ENST00000539739 RAPGEF6Q8TEU7 1601 aa24.4■■□□□ 1.5
DDB1-216ENST00000539739 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
DDB1-216ENST00000539739 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
DDB1-216ENST00000539739 NPM1P06748 294 aaKnown RBP eCLIP24.37■■□□□ 1.49
DDB1-216ENST00000539739 ADCY10Q96PN6 1610 aa24.36■■□□□ 1.49
DDB1-216ENST00000539739 FYCO1Q9BQS8 1478 aa24.34■■□□□ 1.49
DDB1-216ENST00000539739 PCF11O94913 1555 aaKnown RBP24.33■■□□□ 1.49
DDB1-216ENST00000539739 HECW1Q76N89 1606 aa24.33■■□□□ 1.49
DDB1-216ENST00000539739 NUP153P49790 1475 aaKnown RBP24.32■■□□□ 1.48
DDB1-216ENST00000539739 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
DDB1-216ENST00000539739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
DDB1-216ENST00000539739 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
DDB1-216ENST00000539739 KDM5BQ9UGL1 1544 aa24.28■■□□□ 1.48
DDB1-216ENST00000539739 ATP10BO94823 1461 aa24.26■■□□□ 1.47
DDB1-216ENST00000539739 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
DDB1-216ENST00000539739 CCDC18Q5T9S5 1454 aa24.24■■□□□ 1.47
DDB1-216ENST00000539739 APLP2Q06481 763 aa24.24■■□□□ 1.47
DDB1-216ENST00000539739 ZCCHC11Q5TAX3 1644 aaKnown RBP24.22■■□□□ 1.47
DDB1-216ENST00000539739 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
DDB1-216ENST00000539739 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.46
DDB1-216ENST00000539739 PLEKHD1A6NEE1 506 aa24.17■■□□□ 1.46
DDB1-216ENST00000539739 LRRIQ1Q96JM4 1722 aa24.14■■□□□ 1.46
DDB1-216ENST00000539739 ASXL2Q76L83 1435 aa24.14■■□□□ 1.45
DDB1-216ENST00000539739 MAPKBP1O60336 1514 aa24.13■■□□□ 1.45
DDB1-216ENST00000539739 MAP3K1Q13233 1512 aa24.11■■□□□ 1.45
DDB1-216ENST00000539739 TIAM1Q13009 1591 aa24.09■■□□□ 1.45
DDB1-216ENST00000539739 WDR7Q9Y4E6 1490 aa24.09■■□□□ 1.45
DDB1-216ENST00000539739 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
DDB1-216ENST00000539739 CFAP43Q8NDM7 1665 aa24.06■■□□□ 1.44
DDB1-216ENST00000539739 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
DDB1-216ENST00000539739 TROQ12816 1431 aaPredicted RBP24.05■■□□□ 1.44
DDB1-216ENST00000539739 LRRC9Q6ZRR7 1453 aa24.01■■□□□ 1.43
DDB1-216ENST00000539739 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
DDB1-216ENST00000539739 MAGI3Q5TCQ9 1506 aa24■■□□□ 1.43
DDB1-216ENST00000539739 EHBP1L1Q8N3D4 1523 aa23.99■■□□□ 1.43
DDB1-216ENST00000539739 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
DDB1-216ENST00000539739 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
DDB1-216ENST00000539739 TRHP20396 242 aaPredicted RBP23.94■■□□□ 1.42
DDB1-216ENST00000539739 KIF14Q15058 1648 aa23.94■■□□□ 1.42
DDB1-216ENST00000539739 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
DDB1-216ENST00000539739 GLI2P10070 1586 aa23.9■■□□□ 1.42
DDB1-216ENST00000539739 PPARGC1BQ86YN6 1023 aaKnown RBP23.89■■□□□ 1.42
DDB1-216ENST00000539739 SUPT6HQ7KZ85 1726 aaKnown RBP23.88■■□□□ 1.41
DDB1-216ENST00000539739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.88■■□□□ 1.41
DDB1-216ENST00000539739 ABCA9Q8IUA7 1624 aa23.86■■□□□ 1.41
DDB1-216ENST00000539739 NCOA2Q15596 1464 aa23.85■■□□□ 1.41
DDB1-216ENST00000539739 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
DDB1-216ENST00000539739 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
DDB1-216ENST00000539739 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
DDB1-216ENST00000539739 TTC37Q6PGP7 1564 aa23.82■■□□□ 1.4
DDB1-216ENST00000539739 MAP3K4Q9Y6R4 1608 aa23.78■■□□□ 1.4
DDB1-216ENST00000539739 PLCH2O75038 1416 aa23.78■■□□□ 1.4
DDB1-216ENST00000539739 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
DDB1-216ENST00000539739 MYO5CQ9NQX4 1742 aa23.75■■□□□ 1.39
DDB1-216ENST00000539739 CFDP1Q9UEE9 299 aaPredicted RBP23.74■■□□□ 1.39
DDB1-216ENST00000539739 EFCAB2Q5VUJ9 269 aa23.73■■□□□ 1.39
DDB1-216ENST00000539739 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
DDB1-216ENST00000539739 MYOM3Q5VTT5 1437 aa23.72■■□□□ 1.39
DDB1-216ENST00000539739 ARAP3Q8WWN8 1544 aa23.72■■□□□ 1.39
DDB1-216ENST00000539739 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
DDB1-216ENST00000539739 ARHGAP5Q13017 1502 aa23.71■■□□□ 1.39
DDB1-216ENST00000539739 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms