RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
PRKCQ-203ENST00000539722 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
PRKCQ-203ENST00000539722 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
PRKCQ-203ENST00000539722 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
PRKCQ-203ENST00000539722 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
PRKCQ-203ENST00000539722 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
PRKCQ-203ENST00000539722 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
PRKCQ-203ENST00000539722 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
PRKCQ-203ENST00000539722 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
PRKCQ-203ENST00000539722 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
PRKCQ-203ENST00000539722 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
PRKCQ-203ENST00000539722 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
PRKCQ-203ENST00000539722 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
PRKCQ-203ENST00000539722 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
PRKCQ-203ENST00000539722 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
PRKCQ-203ENST00000539722 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
PRKCQ-203ENST00000539722 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
PRKCQ-203ENST00000539722 CUX2O14529 1486 aa16.77■□□□□ 0.28
PRKCQ-203ENST00000539722 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
PRKCQ-203ENST00000539722 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.27
PRKCQ-203ENST00000539722 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
PRKCQ-203ENST00000539722 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
PRKCQ-203ENST00000539722 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
PRKCQ-203ENST00000539722 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
PRKCQ-203ENST00000539722 SETD5Q9C0A6 1442 aa16.74■□□□□ 0.27
PRKCQ-203ENST00000539722 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
PRKCQ-203ENST00000539722 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
PRKCQ-203ENST00000539722 ATP1B4Q9UN42 357 aaPredicted RBP16.68■□□□□ 0.26
PRKCQ-203ENST00000539722 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
PRKCQ-203ENST00000539722 NEFMP07197 916 aa16.66■□□□□ 0.26
PRKCQ-203ENST00000539722 UBE2Q2Q8WVN8 375 aa16.66■□□□□ 0.26
PRKCQ-203ENST00000539722 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
PRKCQ-203ENST00000539722 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
PRKCQ-203ENST00000539722 WASHC2AQ641Q2 1341 aa16.6■□□□□ 0.25
PRKCQ-203ENST00000539722 AKNAQ7Z591 1439 aa16.6■□□□□ 0.25
PRKCQ-203ENST00000539722 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.25
PRKCQ-203ENST00000539722 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
PRKCQ-203ENST00000539722 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
PRKCQ-203ENST00000539722 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
PRKCQ-203ENST00000539722 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
PRKCQ-203ENST00000539722 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRKCQ-203ENST00000539722 ZBED9Q6R2W3 1325 aa16.52■□□□□ 0.24
PRKCQ-203ENST00000539722 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
PRKCQ-203ENST00000539722 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
PRKCQ-203ENST00000539722 C11orf95C9JLR9 678 aaPredicted RBP16.49■□□□□ 0.23
PRKCQ-203ENST00000539722 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
PRKCQ-203ENST00000539722 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
PRKCQ-203ENST00000539722 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
PRKCQ-203ENST00000539722 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
PRKCQ-203ENST00000539722 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
PRKCQ-203ENST00000539722 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRKCQ-203ENST00000539722 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
PRKCQ-203ENST00000539722 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
PRKCQ-203ENST00000539722 PDE4AP27815 886 aa16.4■□□□□ 0.22
PRKCQ-203ENST00000539722 GSE1Q14687 1217 aa16.4■□□□□ 0.22
PRKCQ-203ENST00000539722 CNTLNQ9NXG0 1405 aa16.39■□□□□ 0.21
PRKCQ-203ENST00000539722 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
PRKCQ-203ENST00000539722 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
PRKCQ-203ENST00000539722 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
PRKCQ-203ENST00000539722 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
PRKCQ-203ENST00000539722 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
PRKCQ-203ENST00000539722 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
PRKCQ-203ENST00000539722 EXOC6Q8TAG9 804 aa16.36■□□□□ 0.21
PRKCQ-203ENST00000539722 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
PRKCQ-203ENST00000539722 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
PRKCQ-203ENST00000539722 PKNOX2Q96KN3 472 aa16.33■□□□□ 0.21
PRKCQ-203ENST00000539722 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
PRKCQ-203ENST00000539722 FOXD1Q16676 465 aa16.32■□□□□ 0.2
PRKCQ-203ENST00000539722 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.22e-7■■■■■ 38
PRKCQ-203ENST00000539722 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
PRKCQ-203ENST00000539722 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
PRKCQ-203ENST00000539722 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
PRKCQ-203ENST00000539722 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
PRKCQ-203ENST00000539722 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
PRKCQ-203ENST00000539722 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
PRKCQ-203ENST00000539722 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
PRKCQ-203ENST00000539722 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
PRKCQ-203ENST00000539722 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
PRKCQ-203ENST00000539722 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
PRKCQ-203ENST00000539722 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
PRKCQ-203ENST00000539722 PTPRKQ15262 1439 aa16.27■□□□□ 0.19
PRKCQ-203ENST00000539722 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
PRKCQ-203ENST00000539722 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
PRKCQ-203ENST00000539722 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
PRKCQ-203ENST00000539722 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
PRKCQ-203ENST00000539722 DAXXQ9UER7 740 aaPredicted RBP16.24■□□□□ 0.19
PRKCQ-203ENST00000539722 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
PRKCQ-203ENST00000539722 ARXQ96QS3 562 aa16.22■□□□□ 0.19
PRKCQ-203ENST00000539722 PLIN1O60240 522 aa16.21■□□□□ 0.19
PRKCQ-203ENST00000539722 RRP1P56182 461 aaKnown RBP16.21■□□□□ 0.19
PRKCQ-203ENST00000539722 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
PRKCQ-203ENST00000539722 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
PRKCQ-203ENST00000539722 NCOA1Q15788 1441 aa16.21■□□□□ 0.19
PRKCQ-203ENST00000539722 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
PRKCQ-203ENST00000539722 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
PRKCQ-203ENST00000539722 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
PRKCQ-203ENST00000539722 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
PRKCQ-203ENST00000539722 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
PRKCQ-203ENST00000539722 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
PRKCQ-203ENST00000539722 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms