RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
LMO3-221ENST00000539534 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
LMO3-221ENST00000539534 TNIKQ9UKE5 1360 aa20.14■□□□□ 0.81
LMO3-221ENST00000539534 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
LMO3-221ENST00000539534 CTTNBP2Q8WZ74 1663 aa20.12■□□□□ 0.81
LMO3-221ENST00000539534 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
LMO3-221ENST00000539534 JPH4Q96JJ6 628 aa20.1■□□□□ 0.81
LMO3-221ENST00000539534 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
LMO3-221ENST00000539534 UGGT2Q9NYU1 1516 aa20.02■□□□□ 0.79
LMO3-221ENST00000539534 SHROOM2Q13796 1616 aa20■□□□□ 0.79
LMO3-221ENST00000539534 PRG4Q92954 1404 aaPredicted RBP19.98■□□□□ 0.79
LMO3-221ENST00000539534 DNAJC5Q9H3Z4 198 aa19.97■□□□□ 0.79
LMO3-221ENST00000539534 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
LMO3-221ENST00000539534 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
LMO3-221ENST00000539534 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
LMO3-221ENST00000539534 CARMIL2Q6F5E8 1435 aa19.93■□□□□ 0.78
LMO3-221ENST00000539534 CLIP1P30622 1438 aa19.89■□□□□ 0.77
LMO3-221ENST00000539534 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
LMO3-221ENST00000539534 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
LMO3-221ENST00000539534 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
LMO3-221ENST00000539534 ARHGEF11O15085 1522 aa19.87■□□□□ 0.77
LMO3-221ENST00000539534 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
LMO3-221ENST00000539534 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
LMO3-221ENST00000539534 P3H3Q8IVL6 736 aa19.83■□□□□ 0.77
LMO3-221ENST00000539534 PTPRGP23470 1445 aa19.81■□□□□ 0.76
LMO3-221ENST00000539534 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
LMO3-221ENST00000539534 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
LMO3-221ENST00000539534 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
LMO3-221ENST00000539534 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
LMO3-221ENST00000539534 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
LMO3-221ENST00000539534 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
LMO3-221ENST00000539534 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
LMO3-221ENST00000539534 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
LMO3-221ENST00000539534 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
LMO3-221ENST00000539534 TTBK1Q5TCY1 1321 aaPredicted RBP19.68■□□□□ 0.74
LMO3-221ENST00000539534 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
LMO3-221ENST00000539534 PLB1Q6P1J6 1458 aa19.66■□□□□ 0.74
LMO3-221ENST00000539534 ABCA8O94911 1581 aa19.65■□□□□ 0.74
LMO3-221ENST00000539534 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
LMO3-221ENST00000539534 FYCO1Q9BQS8 1478 aa19.62■□□□□ 0.73
LMO3-221ENST00000539534 ABCC2Q92887 1545 aa19.6■□□□□ 0.73
LMO3-221ENST00000539534 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.72
LMO3-221ENST00000539534 MAP3K1Q13233 1512 aa19.57■□□□□ 0.72
LMO3-221ENST00000539534 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
LMO3-221ENST00000539534 RAPGEF6Q8TEU7 1601 aa19.56■□□□□ 0.72
LMO3-221ENST00000539534 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
LMO3-221ENST00000539534 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
LMO3-221ENST00000539534 PCF11O94913 1555 aaKnown RBP19.54■□□□□ 0.72
LMO3-221ENST00000539534 ATP10BO94823 1461 aa19.54■□□□□ 0.72
LMO3-221ENST00000539534 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
LMO3-221ENST00000539534 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
LMO3-221ENST00000539534 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
LMO3-221ENST00000539534 EPRSP07814 1512 aaKnown RBP19.5■□□□□ 0.71
LMO3-221ENST00000539534 APLP2Q06481 763 aa19.47■□□□□ 0.71
LMO3-221ENST00000539534 CFAP43Q8NDM7 1665 aa19.46■□□□□ 0.71
LMO3-221ENST00000539534 ARID3CA6NKF2 412 aa19.46■□□□□ 0.71
LMO3-221ENST00000539534 TIAM1Q13009 1591 aa19.43■□□□□ 0.7
LMO3-221ENST00000539534 CDK13Q14004 1512 aaKnown RBP19.42■□□□□ 0.7
LMO3-221ENST00000539534 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
LMO3-221ENST00000539534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
LMO3-221ENST00000539534 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
LMO3-221ENST00000539534 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
LMO3-221ENST00000539534 MAPKBP1O60336 1514 aa19.4■□□□□ 0.7
LMO3-221ENST00000539534 ZCCHC11Q5TAX3 1644 aaKnown RBP19.4■□□□□ 0.7
LMO3-221ENST00000539534 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
LMO3-221ENST00000539534 LRRIQ1Q96JM4 1722 aa19.37■□□□□ 0.69
LMO3-221ENST00000539534 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
LMO3-221ENST00000539534 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
LMO3-221ENST00000539534 EHBP1L1Q8N3D4 1523 aa19.34■□□□□ 0.69
LMO3-221ENST00000539534 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
LMO3-221ENST00000539534 LRRC9Q6ZRR7 1453 aa19.33■□□□□ 0.68
LMO3-221ENST00000539534 MAGI3Q5TCQ9 1506 aa19.32■□□□□ 0.68
LMO3-221ENST00000539534 MTUS2Q5JR59 1369 aa19.3■□□□□ 0.68
LMO3-221ENST00000539534 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
LMO3-221ENST00000539534 KCNH8Q96L42 1107 aa19.28■□□□□ 0.68
LMO3-221ENST00000539534 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
LMO3-221ENST00000539534 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
LMO3-221ENST00000539534 GLI2P10070 1586 aa19.22■□□□□ 0.67
LMO3-221ENST00000539534 KIF14Q15058 1648 aa19.21■□□□□ 0.67
LMO3-221ENST00000539534 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
LMO3-221ENST00000539534 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
LMO3-221ENST00000539534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.18■□□□□ 0.66
LMO3-221ENST00000539534 PPARGC1BQ86YN6 1023 aaKnown RBP19.16■□□□□ 0.66
LMO3-221ENST00000539534 ABCA9Q8IUA7 1624 aa19.15■□□□□ 0.66
LMO3-221ENST00000539534 CD109Q6YHK3 1445 aa19.15■□□□□ 0.66
LMO3-221ENST00000539534 PLCH2O75038 1416 aa19.14■□□□□ 0.65
LMO3-221ENST00000539534 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.65
LMO3-221ENST00000539534 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
LMO3-221ENST00000539534 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
LMO3-221ENST00000539534 TTC37Q6PGP7 1564 aa19.11■□□□□ 0.65
LMO3-221ENST00000539534 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
LMO3-221ENST00000539534 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
LMO3-221ENST00000539534 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
LMO3-221ENST00000539534 MIA2Q96PC5 1412 aa19.09■□□□□ 0.65
LMO3-221ENST00000539534 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.65
LMO3-221ENST00000539534 MAP3K4Q9Y6R4 1608 aa19.08■□□□□ 0.65
LMO3-221ENST00000539534 EFCAB2Q5VUJ9 269 aa19.07■□□□□ 0.64
LMO3-221ENST00000539534 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
LMO3-221ENST00000539534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
LMO3-221ENST00000539534 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms