RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 FBLN2P98095 1184 aa18.48■□□□□ 0.55
FAM60A-206ENST00000539409 CEP170Q5SW79 1584 aa18.46■□□□□ 0.55
FAM60A-206ENST00000539409 NUP160Q12769 1436 aa18.44■□□□□ 0.54
FAM60A-206ENST00000539409 CEP162Q5TB80 1403 aa18.42■□□□□ 0.54
FAM60A-206ENST00000539409 IQGAP2Q13576 1575 aa18.39■□□□□ 0.54
FAM60A-206ENST00000539409 KIAA0586Q9BVV6 1533 aa18.39■□□□□ 0.53
FAM60A-206ENST00000539409 CLIP1P30622 1438 aa18.35■□□□□ 0.53
FAM60A-206ENST00000539409 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
FAM60A-206ENST00000539409 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
FAM60A-206ENST00000539409 UGGT2Q9NYU1 1516 aa18.31■□□□□ 0.52
FAM60A-206ENST00000539409 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
FAM60A-206ENST00000539409 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
FAM60A-206ENST00000539409 SAMD9Q5K651 1589 aa18.29■□□□□ 0.52
FAM60A-206ENST00000539409 SHROOM2Q13796 1616 aa18.26■□□□□ 0.51
FAM60A-206ENST00000539409 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
FAM60A-206ENST00000539409 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
FAM60A-206ENST00000539409 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
FAM60A-206ENST00000539409 KIAA0556O60303 1618 aa18.22■□□□□ 0.51
FAM60A-206ENST00000539409 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
FAM60A-206ENST00000539409 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
FAM60A-206ENST00000539409 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
FAM60A-206ENST00000539409 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
FAM60A-206ENST00000539409 CARMIL2Q6F5E8 1435 aa18.15■□□□□ 0.5
FAM60A-206ENST00000539409 VPS8Q8N3P4 1428 aa18.15■□□□□ 0.5
FAM60A-206ENST00000539409 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
FAM60A-206ENST00000539409 FMN1Q68DA7 1419 aa18.09■□□□□ 0.49
FAM60A-206ENST00000539409 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.48
FAM60A-206ENST00000539409 FYCO1Q9BQS8 1478 aa18.03■□□□□ 0.48
FAM60A-206ENST00000539409 CASKIN1Q8WXD9 1431 aa18.03■□□□□ 0.48
FAM60A-206ENST00000539409 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
FAM60A-206ENST00000539409 PTPRGP23470 1445 aa18■□□□□ 0.47
FAM60A-206ENST00000539409 RAPGEF6Q8TEU7 1601 aa17.99■□□□□ 0.47
FAM60A-206ENST00000539409 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
FAM60A-206ENST00000539409 PLB1Q6P1J6 1458 aa17.98■□□□□ 0.47
FAM60A-206ENST00000539409 ABCA8O94911 1581 aa17.98■□□□□ 0.47
FAM60A-206ENST00000539409 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
FAM60A-206ENST00000539409 LRRIQ1Q96JM4 1722 aa17.96■□□□□ 0.47
FAM60A-206ENST00000539409 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
FAM60A-206ENST00000539409 RIMBP3CA6NJZ7 1639 aa17.93■□□□□ 0.46
FAM60A-206ENST00000539409 RIMBP3BA6NNM3 1639 aa17.93■□□□□ 0.46
FAM60A-206ENST00000539409 RIMBP3Q9UFD9 1639 aa17.93■□□□□ 0.46
FAM60A-206ENST00000539409 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
FAM60A-206ENST00000539409 TIAM1Q13009 1591 aa17.92■□□□□ 0.46
FAM60A-206ENST00000539409 UACAQ9BZF9 1416 aa17.91■□□□□ 0.46
FAM60A-206ENST00000539409 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
FAM60A-206ENST00000539409 MAP3K1Q13233 1512 aa17.91■□□□□ 0.46
FAM60A-206ENST00000539409 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
FAM60A-206ENST00000539409 ABCC2Q92887 1545 aa17.9■□□□□ 0.46
FAM60A-206ENST00000539409 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
FAM60A-206ENST00000539409 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
FAM60A-206ENST00000539409 APLP2Q06481 763 aa17.88■□□□□ 0.45
FAM60A-206ENST00000539409 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
FAM60A-206ENST00000539409 ADCY10Q96PN6 1610 aa17.86■□□□□ 0.45
FAM60A-206ENST00000539409 ARID3CA6NKF2 412 aa17.83■□□□□ 0.45
FAM60A-206ENST00000539409 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
FAM60A-206ENST00000539409 ATP10BO94823 1461 aa17.82■□□□□ 0.44
FAM60A-206ENST00000539409 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
FAM60A-206ENST00000539409 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
FAM60A-206ENST00000539409 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
FAM60A-206ENST00000539409 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
FAM60A-206ENST00000539409 ZCCHC11Q5TAX3 1644 aaKnown RBP17.79■□□□□ 0.44
FAM60A-206ENST00000539409 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
FAM60A-206ENST00000539409 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
FAM60A-206ENST00000539409 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
FAM60A-206ENST00000539409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
FAM60A-206ENST00000539409 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
FAM60A-206ENST00000539409 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
FAM60A-206ENST00000539409 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
FAM60A-206ENST00000539409 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
FAM60A-206ENST00000539409 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
FAM60A-206ENST00000539409 KIF14Q15058 1648 aa17.67■□□□□ 0.42
FAM60A-206ENST00000539409 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
FAM60A-206ENST00000539409 PLEKHD1A6NEE1 506 aa17.66■□□□□ 0.42
FAM60A-206ENST00000539409 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
FAM60A-206ENST00000539409 ASXL2Q76L83 1435 aa17.63■□□□□ 0.41
FAM60A-206ENST00000539409 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
FAM60A-206ENST00000539409 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
FAM60A-206ENST00000539409 MAPKBP1O60336 1514 aa17.61■□□□□ 0.41
FAM60A-206ENST00000539409 ABCC10Q5T3U5 1492 aa17.59■□□□□ 0.41
FAM60A-206ENST00000539409 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
FAM60A-206ENST00000539409 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
FAM60A-206ENST00000539409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■■ 30.3
FAM60A-206ENST00000539409 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
FAM60A-206ENST00000539409 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
FAM60A-206ENST00000539409 TRIM26Q12899 539 aaPredicted RBP17.54■□□□□ 0.4
FAM60A-206ENST00000539409 CDC42BPAQ5VT25 1732 aa17.54■□□□□ 0.4
FAM60A-206ENST00000539409 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
FAM60A-206ENST00000539409 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
FAM60A-206ENST00000539409 FGD6Q6ZV73 1430 aa17.53■□□□□ 0.4
FAM60A-206ENST00000539409 GPATCH8Q9UKJ3 1502 aaKnown RBP17.53■□□□□ 0.4
FAM60A-206ENST00000539409 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
FAM60A-206ENST00000539409 PREX2Q70Z35 1606 aa17.51■□□□□ 0.39
FAM60A-206ENST00000539409 MYO5CQ9NQX4 1742 aa17.5■□□□□ 0.39
FAM60A-206ENST00000539409 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
FAM60A-206ENST00000539409 PTPN23Q9H3S7 1636 aa17.48■□□□□ 0.39
FAM60A-206ENST00000539409 CDC42BPBQ9Y5S2 1711 aa17.48■□□□□ 0.39
FAM60A-206ENST00000539409 DIP2BQ9P265 1576 aa17.47■□□□□ 0.39
FAM60A-206ENST00000539409 TCOF1Q13428 1488 aaKnown RBP17.46■□□□□ 0.39
FAM60A-206ENST00000539409 GLI2P10070 1586 aa17.45■□□□□ 0.38
FAM60A-206ENST00000539409 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms