RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CUL7Q14999 1698 aa32.88■■■□□ 2.85
TNFRSF1A-212ENST00000539372 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
TNFRSF1A-212ENST00000539372 CARMIL1Q5VZK9 1371 aa32.8■■■□□ 2.84
TNFRSF1A-212ENST00000539372 KIAA0586Q9BVV6 1533 aa32.74■■■□□ 2.83
TNFRSF1A-212ENST00000539372 RAPGEF2Q9Y4G8 1499 aa32.52■■■□□ 2.8
TNFRSF1A-212ENST00000539372 IQGAP2Q13576 1575 aa32.49■■■□□ 2.79
TNFRSF1A-212ENST00000539372 TTBK1Q5TCY1 1321 aaPredicted RBP32.45■■■□□ 2.78
TNFRSF1A-212ENST00000539372 ADCY10Q96PN6 1610 aa32.44■■■□□ 2.78
TNFRSF1A-212ENST00000539372 NPM1P06748 294 aaKnown RBP eCLIP32.42■■■□□ 2.78
TNFRSF1A-212ENST00000539372 CARMIL2Q6F5E8 1435 aa32.42■■■□□ 2.78
TNFRSF1A-212ENST00000539372 PTPRGP23470 1445 aa32.41■■■□□ 2.78
TNFRSF1A-212ENST00000539372 TNIKQ9UKE5 1360 aa32.37■■■□□ 2.77
TNFRSF1A-212ENST00000539372 DISP1Q96F81 1524 aa32.31■■■□□ 2.76
TNFRSF1A-212ENST00000539372 KIF13AQ9H1H9 1805 aa32.3■■■□□ 2.76
TNFRSF1A-212ENST00000539372 MAPKBP1O60336 1514 aa32.3■■■□□ 2.76
TNFRSF1A-212ENST00000539372 UGGT2Q9NYU1 1516 aa32.28■■■□□ 2.76
TNFRSF1A-212ENST00000539372 FAM69CQ0P6D2 419 aa32.26■■■□□ 2.75
TNFRSF1A-212ENST00000539372 PRXQ9BXM0 1461 aa32.26■■■□□ 2.75
TNFRSF1A-212ENST00000539372 ABCC10Q5T3U5 1492 aa32.25■■■□□ 2.75
TNFRSF1A-212ENST00000539372 CTTNBP2Q8WZ74 1663 aa32.21■■■□□ 2.75
TNFRSF1A-212ENST00000539372 KIAA0556O60303 1618 aa32.19■■■□□ 2.74
TNFRSF1A-212ENST00000539372 ABCC2Q92887 1545 aa32.17■■■□□ 2.74
TNFRSF1A-212ENST00000539372 DIP2BQ9P265 1576 aa32.17■■■□□ 2.74
TNFRSF1A-212ENST00000539372 UACAQ9BZF9 1416 aa32.17■■■□□ 2.74
TNFRSF1A-212ENST00000539372 UHRF1BP1LA0JNW5 1464 aa32.13■■■□□ 2.73
TNFRSF1A-212ENST00000539372 CSRNP3Q8WYN3 585 aa32.13■■■□□ 2.73
TNFRSF1A-212ENST00000539372 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
TNFRSF1A-212ENST00000539372 ASXL2Q76L83 1435 aa32.04■■■□□ 2.72
TNFRSF1A-212ENST00000539372 EEA1Q15075 1411 aa32■■■□□ 2.71
TNFRSF1A-212ENST00000539372 FAM9AQ8IZU1 332 aaPredicted RBP32■■■□□ 2.71
TNFRSF1A-212ENST00000539372 PLB1Q6P1J6 1458 aa31.99■■■□□ 2.71
TNFRSF1A-212ENST00000539372 KDM5BQ9UGL1 1544 aa31.99■■■□□ 2.71
TNFRSF1A-212ENST00000539372 TSPOAP1O95153 1857 aa31.95■■■□□ 2.71
TNFRSF1A-212ENST00000539372 ZCCHC11Q5TAX3 1644 aaKnown RBP31.94■■■□□ 2.7
TNFRSF1A-212ENST00000539372 P3H3Q8IVL6 736 aa31.91■■■□□ 2.7
TNFRSF1A-212ENST00000539372 ABCA8O94911 1581 aa31.87■■■□□ 2.69
TNFRSF1A-212ENST00000539372 GLI2P10070 1586 aa31.87■■■□□ 2.69
TNFRSF1A-212ENST00000539372 CHIC1Q5VXU3 224 aa31.86■■■□□ 2.69
TNFRSF1A-212ENST00000539372 EPRSP07814 1512 aaKnown RBP31.85■■■□□ 2.69
TNFRSF1A-212ENST00000539372 KDM6BO15054 1643 aa31.82■■■□□ 2.68
TNFRSF1A-212ENST00000539372 RANGAP1P46060 587 aaPredicted RBP31.81■■■□□ 2.68
TNFRSF1A-212ENST00000539372 WDR7Q9Y4E6 1490 aa31.78■■■□□ 2.68
TNFRSF1A-212ENST00000539372 SAMD9Q5K651 1589 aa31.77■■■□□ 2.68
TNFRSF1A-212ENST00000539372 AEBP2Q6ZN18 517 aaPredicted RBP31.76■■■□□ 2.67
TNFRSF1A-212ENST00000539372 PPRC1Q5VV67 1664 aaKnown RBP31.76■■■□□ 2.67
TNFRSF1A-212ENST00000539372 ARID3CA6NKF2 412 aa31.74■■■□□ 2.67
TNFRSF1A-212ENST00000539372 KIF21BO75037 1637 aa31.74■■■□□ 2.67
TNFRSF1A-212ENST00000539372 MAP3K4Q9Y6R4 1608 aa31.71■■■□□ 2.67
TNFRSF1A-212ENST00000539372 EHMT2Q96KQ7 1210 aa31.7■■■□□ 2.67
TNFRSF1A-212ENST00000539372 KCNH8Q96L42 1107 aa31.68■■■□□ 2.66
TNFRSF1A-212ENST00000539372 FHOD3Q2V2M9 1422 aa31.64■■■□□ 2.66
TNFRSF1A-212ENST00000539372 ATP10BO94823 1461 aa31.63■■■□□ 2.65
TNFRSF1A-212ENST00000539372 TEX14Q8IWB6 1497 aa31.61■■■□□ 2.65
TNFRSF1A-212ENST00000539372 RAPGEF6Q8TEU7 1601 aa31.6■■■□□ 2.65
TNFRSF1A-212ENST00000539372 UBTFP17480 764 aaKnown RBP31.57■■■□□ 2.64
TNFRSF1A-212ENST00000539372 COL17A1Q9UMD9 1497 aaPredicted RBP31.56■■■□□ 2.64
TNFRSF1A-212ENST00000539372 CD109Q6YHK3 1445 aa31.56■■■□□ 2.64
TNFRSF1A-212ENST00000539372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.52■■■□□ 2.64
TNFRSF1A-212ENST00000539372 HNRNPUL2Q1KMD3 747 aaKnown RBP31.52■■■□□ 2.64
TNFRSF1A-212ENST00000539372 EFCAB5A4FU69 1503 aa31.52■■■□□ 2.64
TNFRSF1A-212ENST00000539372 CFAP43Q8NDM7 1665 aa31.51■■■□□ 2.64
TNFRSF1A-212ENST00000539372 NUP153P49790 1475 aaKnown RBP31.5■■■□□ 2.63
TNFRSF1A-212ENST00000539372 MAGI3Q5TCQ9 1506 aa31.49■■■□□ 2.63
TNFRSF1A-212ENST00000539372 KDM4FA0A1W2PPD8 638 aa31.39■■■□□ 2.62
TNFRSF1A-212ENST00000539372 ABCA9Q8IUA7 1624 aa31.36■■■□□ 2.61
TNFRSF1A-212ENST00000539372 ARHGAP35Q9NRY4 1499 aa31.33■■■□□ 2.61
TNFRSF1A-212ENST00000539372 PLEKHD1A6NEE1 506 aa31.31■■■□□ 2.6
TNFRSF1A-212ENST00000539372 ATP1B4Q9UN42 357 aaPredicted RBP31.26■■■□□ 2.59
TNFRSF1A-212ENST00000539372 FMN1Q68DA7 1419 aa31.25■■■□□ 2.59
TNFRSF1A-212ENST00000539372 CDK13Q14004 1512 aaKnown RBP31.25■■■□□ 2.59
TNFRSF1A-212ENST00000539372 ARAP3Q8WWN8 1544 aa31.23■■■□□ 2.59
TNFRSF1A-212ENST00000539372 ADGRL1O94910 1474 aa31.21■■■□□ 2.59
TNFRSF1A-212ENST00000539372 PHLDB1Q86UU1 1377 aa31.17■■■□□ 2.58
TNFRSF1A-212ENST00000539372 HECW1Q76N89 1606 aa31.17■■■□□ 2.58
TNFRSF1A-212ENST00000539372 NEO1Q92859 1461 aa31.16■■■□□ 2.58
TNFRSF1A-212ENST00000539372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.14■■■□□ 2.58
TNFRSF1A-212ENST00000539372 RAPGEF3O95398 923 aa31.13■■■□□ 2.57
TNFRSF1A-212ENST00000539372 TTC37Q6PGP7 1564 aa31.1■■■□□ 2.57
TNFRSF1A-212ENST00000539372 FANCAO15360 1455 aa31.05■■■□□ 2.56
TNFRSF1A-212ENST00000539372 CDK11AQ9UQ88 783 aaPredicted RBP31.03■■■□□ 2.56
TNFRSF1A-212ENST00000539372 AKNAQ7Z591 1439 aa31.02■■■□□ 2.56
TNFRSF1A-212ENST00000539372 FRMPD1Q5SYB0 1578 aa31.01■■■□□ 2.56
TNFRSF1A-212ENST00000539372 LRRIQ1Q96JM4 1722 aa30.99■■■□□ 2.55
TNFRSF1A-212ENST00000539372 CFAP74Q9C0B2 1584 aa30.99■■■□□ 2.55
TNFRSF1A-212ENST00000539372 PCF11O94913 1555 aaKnown RBP30.98■■■□□ 2.55
TNFRSF1A-212ENST00000539372 DENND4BO75064 1496 aaPredicted RBP30.97■■■□□ 2.55
TNFRSF1A-212ENST00000539372 CLIP1P30622 1438 aa30.97■■■□□ 2.55
TNFRSF1A-212ENST00000539372 CASKIN1Q8WXD9 1431 aa30.97■■■□□ 2.55
TNFRSF1A-212ENST00000539372 PLCH2O75038 1416 aa30.95■■■□□ 2.54
TNFRSF1A-212ENST00000539372 TROQ12816 1431 aaPredicted RBP30.95■■■□□ 2.54
TNFRSF1A-212ENST00000539372 KIF14Q15058 1648 aa30.95■■■□□ 2.54
TNFRSF1A-212ENST00000539372 RICTORQ6R327 1708 aa30.9■■■□□ 2.54
TNFRSF1A-212ENST00000539372 CCDC18Q5T9S5 1454 aa30.88■■■□□ 2.53
TNFRSF1A-212ENST00000539372 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
TNFRSF1A-212ENST00000539372 FYCO1Q9BQS8 1478 aa30.85■■■□□ 2.53
TNFRSF1A-212ENST00000539372 SCAPERQ9BY12 1400 aa30.84■■■□□ 2.53
TNFRSF1A-212ENST00000539372 EFCAB2Q5VUJ9 269 aa30.84■■■□□ 2.53
TNFRSF1A-212ENST00000539372 ARHGEF40Q8TER5 1519 aa30.83■■■□□ 2.53
TNFRSF1A-212ENST00000539372 ARID4BQ4LE39 1312 aaPredicted RBP30.82■■■□□ 2.52
TNFRSF1A-212ENST00000539372 ARHGAP5Q13017 1502 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms