RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 SYNJ2O15056 1496 aa39.95■■■■□ 3.99
KLHL42-202ENST00000539176 GRIN2AQ12879 1464 aa39.94■■■■□ 3.98
KLHL42-202ENST00000539176 FBLN2P98095 1184 aa39.91■■■■□ 3.98
KLHL42-202ENST00000539176 CHMP7Q8WUX9 453 aaPredicted RBP39.9■■■■□ 3.98
KLHL42-202ENST00000539176 ARHGAP35Q9NRY4 1499 aa39.9■■■■□ 3.98
KLHL42-202ENST00000539176 ARAP1Q96P48 1450 aa39.87■■■■□ 3.97
KLHL42-202ENST00000539176 VPS8Q8N3P4 1428 aa39.76■■■■□ 3.96
KLHL42-202ENST00000539176 CEP170Q5SW79 1584 aa39.75■■■■□ 3.95
KLHL42-202ENST00000539176 P3H3Q8IVL6 736 aa39.74■■■■□ 3.95
KLHL42-202ENST00000539176 IQGAP2Q13576 1575 aa39.74■■■■□ 3.95
KLHL42-202ENST00000539176 CHD1O14646 1710 aa39.72■■■■□ 3.95
KLHL42-202ENST00000539176 KIAA0586Q9BVV6 1533 aa39.66■■■■□ 3.94
KLHL42-202ENST00000539176 EFCAB5A4FU69 1503 aa39.65■■■■□ 3.94
KLHL42-202ENST00000539176 PPARGC1BQ86YN6 1023 aaKnown RBP39.65■■■■□ 3.94
KLHL42-202ENST00000539176 NUP160Q12769 1436 aa39.64■■■■□ 3.94
KLHL42-202ENST00000539176 HRCP23327 699 aa39.64■■■■□ 3.94
KLHL42-202ENST00000539176 FHOD3Q2V2M9 1422 aa39.63■■■■□ 3.93
KLHL42-202ENST00000539176 SAMD9Q5K651 1589 aa39.61■■■■□ 3.93
KLHL42-202ENST00000539176 UGGT2Q9NYU1 1516 aa39.51■■■■□ 3.92
KLHL42-202ENST00000539176 TTBK1Q5TCY1 1321 aaPredicted RBP39.42■■■■□ 3.9
KLHL42-202ENST00000539176 DISP1Q96F81 1524 aa39.39■■■■□ 3.9
KLHL42-202ENST00000539176 PCF11O94913 1555 aaKnown RBP39.36■■■■□ 3.89
KLHL42-202ENST00000539176 KIAA0556O60303 1618 aa39.36■■■■□ 3.89
KLHL42-202ENST00000539176 JPH4Q96JJ6 628 aa39.35■■■■□ 3.89
KLHL42-202ENST00000539176 APLP2Q06481 763 aa39.32■■■■□ 3.89
KLHL42-202ENST00000539176 FMN1Q68DA7 1419 aa39.3■■■■□ 3.88
KLHL42-202ENST00000539176 ATP1B4Q9UN42 357 aaPredicted RBP39.25■■■■□ 3.87
KLHL42-202ENST00000539176 CASKIN1Q8WXD9 1431 aa39.22■■■■□ 3.87
KLHL42-202ENST00000539176 FYCO1Q9BQS8 1478 aa39.2■■■■□ 3.87
KLHL42-202ENST00000539176 CLASP1Q7Z460 1538 aa39.18■■■■□ 3.86
KLHL42-202ENST00000539176 CARMIL2Q6F5E8 1435 aa39.16■■■■□ 3.86
KLHL42-202ENST00000539176 PRG4Q92954 1404 aaPredicted RBP39.15■■■■□ 3.86
KLHL42-202ENST00000539176 KANK4Q5T7N3 995 aaPredicted RBP39.14■■■■□ 3.86
KLHL42-202ENST00000539176 SHROOM2Q13796 1616 aa39.14■■■■□ 3.86
KLHL42-202ENST00000539176 TIAM1Q13009 1591 aa39.11■■■■□ 3.85
KLHL42-202ENST00000539176 LRRIQ1Q96JM4 1722 aa39.08■■■■□ 3.85
KLHL42-202ENST00000539176 CFAP43Q8NDM7 1665 aa39.05■■■■□ 3.84
KLHL42-202ENST00000539176 MAP3K1Q13233 1512 aa39.02■■■■□ 3.84
KLHL42-202ENST00000539176 ERCC6L2Q5T890 1561 aa39.02■■■■□ 3.84
KLHL42-202ENST00000539176 HECW1Q76N89 1606 aa38.98■■■■□ 3.83
KLHL42-202ENST00000539176 RAPGEF6Q8TEU7 1601 aa38.94■■■■□ 3.82
KLHL42-202ENST00000539176 PLB1Q6P1J6 1458 aa38.92■■■■□ 3.82
KLHL42-202ENST00000539176 LRRC9Q6ZRR7 1453 aa38.92■■■■□ 3.82
KLHL42-202ENST00000539176 ARID3CA6NKF2 412 aa38.92■■■■□ 3.82
KLHL42-202ENST00000539176 OSCARQ8IYS5 282 aa38.92■■■■□ 3.82
KLHL42-202ENST00000539176 ZEB1P37275 1124 aaPredicted RBP38.88■■■■□ 3.81
KLHL42-202ENST00000539176 CDK13Q14004 1512 aaKnown RBP38.86■■■■□ 3.81
KLHL42-202ENST00000539176 EPRSP07814 1512 aaKnown RBP38.85■■■■□ 3.81
KLHL42-202ENST00000539176 PTPRGP23470 1445 aa38.85■■■■□ 3.81
KLHL42-202ENST00000539176 NUP153P49790 1475 aaKnown RBP38.84■■■■□ 3.81
KLHL42-202ENST00000539176 CCDC18Q5T9S5 1454 aa38.82■■■■□ 3.8
KLHL42-202ENST00000539176 ABCA8O94911 1581 aa38.79■■■■□ 3.8
KLHL42-202ENST00000539176 MAGI3Q5TCQ9 1506 aa38.73■■■■□ 3.79
KLHL42-202ENST00000539176 MTUS2Q5JR59 1369 aa38.72■■■■□ 3.79
KLHL42-202ENST00000539176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.64■■■■□ 3.78
KLHL42-202ENST00000539176 HNRNPUL2Q1KMD3 747 aaKnown RBP38.64■■■■□ 3.78
KLHL42-202ENST00000539176 EHBP1L1Q8N3D4 1523 aa38.63■■■■□ 3.77
KLHL42-202ENST00000539176 UACAQ9BZF9 1416 aa38.61■■■■□ 3.77
KLHL42-202ENST00000539176 PHLDB1Q86UU1 1377 aa38.6■■■■□ 3.77
KLHL42-202ENST00000539176 ATP10BO94823 1461 aa38.55■■■■□ 3.76
KLHL42-202ENST00000539176 SUPT6HQ7KZ85 1726 aaKnown RBP38.54■■■■□ 3.76
KLHL42-202ENST00000539176 NCOA2Q15596 1464 aa38.51■■■■□ 3.75
KLHL42-202ENST00000539176 ABCC2Q92887 1545 aa38.51■■■■□ 3.75
KLHL42-202ENST00000539176 RRBP1Q9P2E9 1410 aaKnown RBP38.49■■■■□ 3.75
KLHL42-202ENST00000539176 CDK11AQ9UQ88 783 aaPredicted RBP38.45■■■■□ 3.75
KLHL42-202ENST00000539176 CCNB3Q8WWL7 1395 aa38.43■■■■□ 3.74
KLHL42-202ENST00000539176 ARHGEF11O15085 1522 aa38.41■■■■□ 3.74
KLHL42-202ENST00000539176 TROQ12816 1431 aaPredicted RBP38.4■■■■□ 3.74
KLHL42-202ENST00000539176 UHRF1BP1LA0JNW5 1464 aa38.37■■■■□ 3.73
KLHL42-202ENST00000539176 ADCY10Q96PN6 1610 aa38.34■■■■□ 3.73
KLHL42-202ENST00000539176 PLEKHD1A6NEE1 506 aa38.32■■■■□ 3.73
KLHL42-202ENST00000539176 KIF14Q15058 1648 aa38.32■■■■□ 3.73
KLHL42-202ENST00000539176 MYOM3Q5VTT5 1437 aa38.31■■■■□ 3.72
KLHL42-202ENST00000539176 ZCCHC11Q5TAX3 1644 aaKnown RBP38.3■■■■□ 3.72
KLHL42-202ENST00000539176 FGD6Q6ZV73 1430 aa38.3■■■■□ 3.72
KLHL42-202ENST00000539176 CCER1Q8TC90 406 aaPredicted RBP38.28■■■■□ 3.72
KLHL42-202ENST00000539176 FAM50AQ14320 339 aaKnown RBP38.27■■■■□ 3.72
KLHL42-202ENST00000539176 KDM5BQ9UGL1 1544 aa38.26■■■■□ 3.71
KLHL42-202ENST00000539176 ITGAEP38570 1179 aa38.22■■■■□ 3.71
KLHL42-202ENST00000539176 RIMBP3CA6NJZ7 1639 aa38.18■■■■□ 3.7
KLHL42-202ENST00000539176 RIMBP3BA6NNM3 1639 aa38.18■■■■□ 3.7
KLHL42-202ENST00000539176 RIMBP3Q9UFD9 1639 aa38.18■■■■□ 3.7
KLHL42-202ENST00000539176 PTPN23Q9H3S7 1636 aa38.15■■■■□ 3.7
KLHL42-202ENST00000539176 ABCC10Q5T3U5 1492 aa38.1■■■■□ 3.69
KLHL42-202ENST00000539176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.07■■■■□ 3.68
KLHL42-202ENST00000539176 GPATCH8Q9UKJ3 1502 aaKnown RBP38.06■■■■□ 3.68
KLHL42-202ENST00000539176 MIA2Q96PC5 1412 aa38.05■■■■□ 3.68
KLHL42-202ENST00000539176 ITSN2Q9NZM3 1697 aa38.04■■■■□ 3.68
KLHL42-202ENST00000539176 KCNH8Q96L42 1107 aa38.04■■■■□ 3.68
KLHL42-202ENST00000539176 CDC42BPAQ5VT25 1732 aa38.04■■■■□ 3.68
KLHL42-202ENST00000539176 TCOF1Q13428 1488 aaKnown RBP38.04■■■■□ 3.68
KLHL42-202ENST00000539176 CYB5RLQ6IPT4 315 aa38.01■■■■□ 3.68
KLHL42-202ENST00000539176 TTC37Q6PGP7 1564 aa37.99■■■■□ 3.67
KLHL42-202ENST00000539176 ZNF644Q9H582 1327 aaPredicted RBP37.98■■■■□ 3.67
KLHL42-202ENST00000539176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.97■■■■□ 3.67
KLHL42-202ENST00000539176 CFDP1Q9UEE9 299 aaPredicted RBP37.96■■■■□ 3.67
KLHL42-202ENST00000539176 WDR7Q9Y4E6 1490 aa37.93■■■■□ 3.66
KLHL42-202ENST00000539176 NPM1P06748 294 aaKnown RBP eCLIP37.92■■■■□ 3.66
KLHL42-202ENST00000539176 ASXL2Q76L83 1435 aa37.92■■■■□ 3.66
KLHL42-202ENST00000539176 PTPRKQ15262 1439 aa37.91■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms