RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
PTPN6-212ENST00000539029 TOP2BQ02880 1626 aa18.44■□□□□ 0.54
PTPN6-212ENST00000539029 NUP160Q12769 1436 aa18.4■□□□□ 0.54
PTPN6-212ENST00000539029 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
PTPN6-212ENST00000539029 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
PTPN6-212ENST00000539029 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
PTPN6-212ENST00000539029 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
PTPN6-212ENST00000539029 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
PTPN6-212ENST00000539029 PPRC1Q5VV67 1664 aaKnown RBP18.34■□□□□ 0.53
PTPN6-212ENST00000539029 CERKQ8TCT0 537 aa18.33■□□□□ 0.52
PTPN6-212ENST00000539029 COL17A1Q9UMD9 1497 aaPredicted RBP18.31■□□□□ 0.52
PTPN6-212ENST00000539029 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
PTPN6-212ENST00000539029 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
PTPN6-212ENST00000539029 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
PTPN6-212ENST00000539029 GLI2P10070 1586 aa18.19■□□□□ 0.5
PTPN6-212ENST00000539029 PCF11O94913 1555 aaKnown RBP18.18■□□□□ 0.5
PTPN6-212ENST00000539029 CUX1P39880 1505 aa18.16■□□□□ 0.5
PTPN6-212ENST00000539029 PTPRMP28827 1452 aa18.13■□□□□ 0.49
PTPN6-212ENST00000539029 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
PTPN6-212ENST00000539029 TEX14Q8IWB6 1497 aa18.1■□□□□ 0.49
PTPN6-212ENST00000539029 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
PTPN6-212ENST00000539029 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
PTPN6-212ENST00000539029 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
PTPN6-212ENST00000539029 KIF21BO75037 1637 aa18.05■□□□□ 0.48
PTPN6-212ENST00000539029 MAP3K4Q9Y6R4 1608 aa18.04■□□□□ 0.48
PTPN6-212ENST00000539029 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
PTPN6-212ENST00000539029 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
PTPN6-212ENST00000539029 HSPA2P54652 639 aa17.97■□□□□ 0.47
PTPN6-212ENST00000539029 ABCC2Q92887 1545 aa17.97■□□□□ 0.47
PTPN6-212ENST00000539029 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
PTPN6-212ENST00000539029 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
PTPN6-212ENST00000539029 CUL7Q14999 1698 aa17.9■□□□□ 0.46
PTPN6-212ENST00000539029 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
PTPN6-212ENST00000539029 PTPRGP23470 1445 aa17.86■□□□□ 0.45
PTPN6-212ENST00000539029 MADDQ8WXG6 1647 aa17.84■□□□□ 0.45
PTPN6-212ENST00000539029 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
PTPN6-212ENST00000539029 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
PTPN6-212ENST00000539029 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
PTPN6-212ENST00000539029 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
PTPN6-212ENST00000539029 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
PTPN6-212ENST00000539029 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
PTPN6-212ENST00000539029 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
PTPN6-212ENST00000539029 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
PTPN6-212ENST00000539029 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
PTPN6-212ENST00000539029 IQSEC2Q5JU85 1478 aa17.69■□□□□ 0.42
PTPN6-212ENST00000539029 CD109Q6YHK3 1445 aa17.69■□□□□ 0.42
PTPN6-212ENST00000539029 MED1Q15648 1581 aaPredicted RBP17.68■□□□□ 0.42
PTPN6-212ENST00000539029 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
PTPN6-212ENST00000539029 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
PTPN6-212ENST00000539029 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
PTPN6-212ENST00000539029 YEATS2Q9ULM3 1422 aa17.67■□□□□ 0.42
PTPN6-212ENST00000539029 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
PTPN6-212ENST00000539029 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
PTPN6-212ENST00000539029 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
PTPN6-212ENST00000539029 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
PTPN6-212ENST00000539029 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
PTPN6-212ENST00000539029 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
PTPN6-212ENST00000539029 LTBP4Q8N2S1 1624 aa17.59■□□□□ 0.41
PTPN6-212ENST00000539029 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
PTPN6-212ENST00000539029 PTPRTO14522 1441 aa17.54■□□□□ 0.4
PTPN6-212ENST00000539029 PREX1Q8TCU6 1659 aa17.53■□□□□ 0.4
PTPN6-212ENST00000539029 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
PTPN6-212ENST00000539029 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
PTPN6-212ENST00000539029 KCNH8Q96L42 1107 aa17.49■□□□□ 0.39
PTPN6-212ENST00000539029 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
PTPN6-212ENST00000539029 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
PTPN6-212ENST00000539029 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
PTPN6-212ENST00000539029 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
PTPN6-212ENST00000539029 TTC37Q6PGP7 1564 aa17.44■□□□□ 0.38
PTPN6-212ENST00000539029 ARHGEF40Q8TER5 1519 aa17.42■□□□□ 0.38
PTPN6-212ENST00000539029 FER1L4A9Z1Z3 1794 aa17.41■□□□□ 0.38
PTPN6-212ENST00000539029 HSPA1LP34931 641 aa17.41■□□□□ 0.38
PTPN6-212ENST00000539029 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
PTPN6-212ENST00000539029 FANCAO15360 1455 aa17.38■□□□□ 0.37
PTPN6-212ENST00000539029 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
PTPN6-212ENST00000539029 UHRF1BP1Q6BDS2 1440 aa17.36■□□□□ 0.37
PTPN6-212ENST00000539029 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
PTPN6-212ENST00000539029 IQGAP2Q13576 1575 aa17.35■□□□□ 0.37
PTPN6-212ENST00000539029 NEO1Q92859 1461 aa17.32■□□□□ 0.36
PTPN6-212ENST00000539029 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
PTPN6-212ENST00000539029 MLECQ14165 292 aa17.3■□□□□ 0.36
PTPN6-212ENST00000539029 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
PTPN6-212ENST00000539029 AKNAQ7Z591 1439 aa17.28■□□□□ 0.36
PTPN6-212ENST00000539029 CEBPAP49715 358 aaPredicted RBP17.27■□□□□ 0.36
PTPN6-212ENST00000539029 IGF1RP08069 1367 aa17.27■□□□□ 0.35
PTPN6-212ENST00000539029 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
PTPN6-212ENST00000539029 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
PTPN6-212ENST00000539029 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
PTPN6-212ENST00000539029 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
PTPN6-212ENST00000539029 ARHGEF12Q9NZN5 1544 aa17.22■□□□□ 0.35
PTPN6-212ENST00000539029 RGS17Q9UGC6 210 aaPredicted RBP17.22■□□□□ 0.35
PTPN6-212ENST00000539029 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
PTPN6-212ENST00000539029 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
PTPN6-212ENST00000539029 UGGT2Q9NYU1 1516 aa17.18■□□□□ 0.34
PTPN6-212ENST00000539029 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
PTPN6-212ENST00000539029 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
PTPN6-212ENST00000539029 TOM1O60784 492 aa17.17■□□□□ 0.34
PTPN6-212ENST00000539029 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
PTPN6-212ENST00000539029 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
PTPN6-212ENST00000539029 ABCA8O94911 1581 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms