RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
PDE4C-204ENST00000539010 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
PDE4C-204ENST00000539010 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
PDE4C-204ENST00000539010 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
PDE4C-204ENST00000539010 IQGAP2Q13576 1575 aa22.82■■□□□ 1.24
PDE4C-204ENST00000539010 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
PDE4C-204ENST00000539010 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
PDE4C-204ENST00000539010 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
PDE4C-204ENST00000539010 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
PDE4C-204ENST00000539010 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
PDE4C-204ENST00000539010 CLIP1P30622 1438 aa22.69■■□□□ 1.22
PDE4C-204ENST00000539010 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
PDE4C-204ENST00000539010 EFCAB5A4FU69 1503 aa22.66■■□□□ 1.22
PDE4C-204ENST00000539010 CARMIL2Q6F5E8 1435 aa22.63■■□□□ 1.21
PDE4C-204ENST00000539010 SAMD9Q5K651 1589 aa22.62■■□□□ 1.21
PDE4C-204ENST00000539010 PRG4Q92954 1404 aaPredicted RBP22.61■■□□□ 1.21
PDE4C-204ENST00000539010 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
PDE4C-204ENST00000539010 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
PDE4C-204ENST00000539010 KIAA0556O60303 1618 aa22.58■■□□□ 1.21
PDE4C-204ENST00000539010 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
PDE4C-204ENST00000539010 FHOD3Q2V2M9 1422 aa22.52■■□□□ 1.2
PDE4C-204ENST00000539010 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
PDE4C-204ENST00000539010 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
PDE4C-204ENST00000539010 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
PDE4C-204ENST00000539010 PTPRGP23470 1445 aa22.43■■□□□ 1.18
PDE4C-204ENST00000539010 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
PDE4C-204ENST00000539010 VPS8Q8N3P4 1428 aa22.41■■□□□ 1.18
PDE4C-204ENST00000539010 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
PDE4C-204ENST00000539010 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
PDE4C-204ENST00000539010 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
PDE4C-204ENST00000539010 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
PDE4C-204ENST00000539010 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
PDE4C-204ENST00000539010 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
PDE4C-204ENST00000539010 FYCO1Q9BQS8 1478 aa22.31■■□□□ 1.16
PDE4C-204ENST00000539010 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
PDE4C-204ENST00000539010 PCF11O94913 1555 aaKnown RBP22.29■■□□□ 1.16
PDE4C-204ENST00000539010 PLB1Q6P1J6 1458 aa22.29■■□□□ 1.16
PDE4C-204ENST00000539010 ABCA8O94911 1581 aa22.29■■□□□ 1.16
PDE4C-204ENST00000539010 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
PDE4C-204ENST00000539010 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
PDE4C-204ENST00000539010 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
PDE4C-204ENST00000539010 APLP2Q06481 763 aa22.24■■□□□ 1.15
PDE4C-204ENST00000539010 ABCC2Q92887 1545 aa22.24■■□□□ 1.15
PDE4C-204ENST00000539010 UHRF1BP1LA0JNW5 1464 aa22.23■■□□□ 1.15
PDE4C-204ENST00000539010 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
PDE4C-204ENST00000539010 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
PDE4C-204ENST00000539010 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
PDE4C-204ENST00000539010 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
PDE4C-204ENST00000539010 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
PDE4C-204ENST00000539010 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
PDE4C-204ENST00000539010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
PDE4C-204ENST00000539010 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
PDE4C-204ENST00000539010 LRRIQ1Q96JM4 1722 aa22.13■■□□□ 1.13
PDE4C-204ENST00000539010 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
PDE4C-204ENST00000539010 NPM1P06748 294 aaKnown RBP eCLIP22.13■■□□□ 1.13
PDE4C-204ENST00000539010 KDM5BQ9UGL1 1544 aa22.12■■□□□ 1.13
PDE4C-204ENST00000539010 ATP10BO94823 1461 aa22.11■■□□□ 1.13
PDE4C-204ENST00000539010 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
PDE4C-204ENST00000539010 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
PDE4C-204ENST00000539010 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
PDE4C-204ENST00000539010 CDK13Q14004 1512 aaKnown RBP22.1■■□□□ 1.13
PDE4C-204ENST00000539010 ZCCHC11Q5TAX3 1644 aaKnown RBP22.07■■□□□ 1.12
PDE4C-204ENST00000539010 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
PDE4C-204ENST00000539010 MTUS2Q5JR59 1369 aa22.03■■□□□ 1.12
PDE4C-204ENST00000539010 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.11
PDE4C-204ENST00000539010 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
PDE4C-204ENST00000539010 EHBP1L1Q8N3D4 1523 aa21.99■■□□□ 1.11
PDE4C-204ENST00000539010 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
PDE4C-204ENST00000539010 MAGI3Q5TCQ9 1506 aa21.95■■□□□ 1.1
PDE4C-204ENST00000539010 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
PDE4C-204ENST00000539010 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
PDE4C-204ENST00000539010 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
PDE4C-204ENST00000539010 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
PDE4C-204ENST00000539010 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
PDE4C-204ENST00000539010 KIF14Q15058 1648 aa21.89■■□□□ 1.09
PDE4C-204ENST00000539010 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
PDE4C-204ENST00000539010 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
PDE4C-204ENST00000539010 CCNB3Q8WWL7 1395 aa21.79■■□□□ 1.08
PDE4C-204ENST00000539010 ABCC10Q5T3U5 1492 aa21.78■■□□□ 1.08
PDE4C-204ENST00000539010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.78■■□□□ 1.08
PDE4C-204ENST00000539010 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
PDE4C-204ENST00000539010 ABCA9Q8IUA7 1624 aa21.75■■□□□ 1.07
PDE4C-204ENST00000539010 TTC37Q6PGP7 1564 aa21.75■■□□□ 1.07
PDE4C-204ENST00000539010 GLI2P10070 1586 aa21.74■■□□□ 1.07
PDE4C-204ENST00000539010 MYOM3Q5VTT5 1437 aa21.74■■□□□ 1.07
PDE4C-204ENST00000539010 ITSN2Q9NZM3 1697 aa21.74■■□□□ 1.07
PDE4C-204ENST00000539010 DIP2BQ9P265 1576 aa21.73■■□□□ 1.07
PDE4C-204ENST00000539010 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
PDE4C-204ENST00000539010 MYO5CQ9NQX4 1742 aa21.72■■□□□ 1.07
PDE4C-204ENST00000539010 FAM69CQ0P6D2 419 aa21.72■■□□□ 1.07
PDE4C-204ENST00000539010 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
PDE4C-204ENST00000539010 MIA2Q96PC5 1412 aa21.69■■□□□ 1.06
PDE4C-204ENST00000539010 CFDP1Q9UEE9 299 aaPredicted RBP21.69■■□□□ 1.06
PDE4C-204ENST00000539010 CD109Q6YHK3 1445 aa21.69■■□□□ 1.06
PDE4C-204ENST00000539010 PREX2Q70Z35 1606 aa21.68■■□□□ 1.06
PDE4C-204ENST00000539010 PLCH2O75038 1416 aa21.68■■□□□ 1.06
PDE4C-204ENST00000539010 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
PDE4C-204ENST00000539010 ARAP3Q8WWN8 1544 aa21.66■■□□□ 1.06
PDE4C-204ENST00000539010 KIF13AQ9H1H9 1805 aa21.65■■□□□ 1.06
PDE4C-204ENST00000539010 MAP3K4Q9Y6R4 1608 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms