RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 EIF5BO60841 1220 aaKnown RBP9.32□□□□□ -0.92
SCAPER-203ENST00000538941 SIN3AQ96ST3 1273 aa9.31□□□□□ -0.92
SCAPER-203ENST00000538941 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
SCAPER-203ENST00000538941 KANK4Q5T7N3 995 aaPredicted RBP9.31□□□□□ -0.92
SCAPER-203ENST00000538941 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
SCAPER-203ENST00000538941 MRS2Q9HD23 443 aa9.3□□□□□ -0.92
SCAPER-203ENST00000538941 RAB3GAP2Q9H2M9 1393 aa9.3□□□□□ -0.92
SCAPER-203ENST00000538941 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
SCAPER-203ENST00000538941 KIF27Q86VH2 1401 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 ERICH6BQ5W0A0 696 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 NOP58Q9Y2X3 529 aaKnown RBP9.29□□□□□ -0.92
SCAPER-203ENST00000538941 SMARCA2P51531 1590 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 RAPGEF2Q9Y4G8 1499 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 DEKP35659 375 aaKnown RBP9.28□□□□□ -0.92
SCAPER-203ENST00000538941 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
SCAPER-203ENST00000538941 KIF21BO75037 1637 aa9.27□□□□□ -0.93
SCAPER-203ENST00000538941 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCAPER-203ENST00000538941 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
SCAPER-203ENST00000538941 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
SCAPER-203ENST00000538941 MTUS2Q5JR59 1369 aa9.22□□□□□ -0.93
SCAPER-203ENST00000538941 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
SCAPER-203ENST00000538941 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.93
SCAPER-203ENST00000538941 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
SCAPER-203ENST00000538941 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
SCAPER-203ENST00000538941 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
SCAPER-203ENST00000538941 ARHGAP35Q9NRY4 1499 aa9.17□□□□□ -0.94
SCAPER-203ENST00000538941 BICRAQ9NZM4 1560 aa9.17□□□□□ -0.94
SCAPER-203ENST00000538941 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
SCAPER-203ENST00000538941 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
SCAPER-203ENST00000538941 CHIC2Q9UKJ5 165 aa9.16□□□□□ -0.94
SCAPER-203ENST00000538941 EIF4G1Q04637 1599 aaKnown RBP9.16□□□□□ -0.94
SCAPER-203ENST00000538941 HSPA5P11021 654 aaKnown RBP9.14□□□□□ -0.95
SCAPER-203ENST00000538941 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
SCAPER-203ENST00000538941 NEFMP07197 916 aa9.13□□□□□ -0.95
SCAPER-203ENST00000538941 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
SCAPER-203ENST00000538941 ERICH3Q5RHP9 1530 aa9.12□□□□□ -0.95
SCAPER-203ENST00000538941 IPO9Q96P70 1041 aaKnown RBP9.12□□□□□ -0.95
SCAPER-203ENST00000538941 CARMIL1Q5VZK9 1371 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 UNC13AQ9UPW8 1703 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
SCAPER-203ENST00000538941 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 LAS1LQ9Y4W2 734 aaKnown RBP9.11□□□□□ -0.95
SCAPER-203ENST00000538941 CUX2O14529 1486 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 NCAPD3P42695 1498 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-203ENST00000538941 ZBED9Q6R2W3 1325 aa9.07□□□□□ -0.96
SCAPER-203ENST00000538941 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
SCAPER-203ENST00000538941 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
SCAPER-203ENST00000538941 HMGXB3Q12766 1538 aa9.07□□□□□ -0.96
SCAPER-203ENST00000538941 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.06□□□□□ -0.96
SCAPER-203ENST00000538941 NUDCQ9Y266 331 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 FMN1Q68DA7 1419 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 MSH5O43196 834 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 WDR97A6NE52 1622 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 CANXP27824 592 aaKnown RBP9.06□□□□□ -0.96
SCAPER-203ENST00000538941 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
SCAPER-203ENST00000538941 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
SCAPER-203ENST00000538941 TCERG1O14776 1098 aaKnown RBP9.05□□□□□ -0.96
SCAPER-203ENST00000538941 CCDC18Q5T9S5 1454 aa9.05□□□□□ -0.96
SCAPER-203ENST00000538941 ERCC6Q03468 1493 aa9.04□□□□□ -0.96
SCAPER-203ENST00000538941 LRRC9Q6ZRR7 1453 aa9.04□□□□□ -0.96
SCAPER-203ENST00000538941 PRXQ9BXM0 1461 aa9.04□□□□□ -0.96
SCAPER-203ENST00000538941 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
SCAPER-203ENST00000538941 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
SCAPER-203ENST00000538941 PHLDB1Q86UU1 1377 aa9.03□□□□□ -0.96
SCAPER-203ENST00000538941 PRKRIP1Q9H875 184 aaPredicted RBP9.03□□□□□ -0.96
SCAPER-203ENST00000538941 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.96
SCAPER-203ENST00000538941 ZNF777Q9ULD5 760 aaPredicted RBP9.02□□□□□ -0.96
SCAPER-203ENST00000538941 TOP2BQ02880 1626 aa9.02□□□□□ -0.97
SCAPER-203ENST00000538941 CNTLNQ9NXG0 1405 aa9.01□□□□□ -0.97
SCAPER-203ENST00000538941 UACAQ9BZF9 1416 aa9□□□□□ -0.97
SCAPER-203ENST00000538941 FHOD3Q2V2M9 1422 aa9□□□□□ -0.97
SCAPER-203ENST00000538941 BECN1Q14457 450 aa8.99□□□□□ -0.97
SCAPER-203ENST00000538941 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
SCAPER-203ENST00000538941 WDR43Q15061 677 aaKnown RBP eCLIP8.99□□□□□ -0.97
SCAPER-203ENST00000538941 MPHOSPH9Q99550 1183 aa8.99□□□□□ -0.97
SCAPER-203ENST00000538941 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
SCAPER-203ENST00000538941 CARD11Q9BXL7 1154 aa8.98□□□□□ -0.97
SCAPER-203ENST00000538941 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
SCAPER-203ENST00000538941 RCAN3Q9UKA8 241 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-203ENST00000538941 WASHC2AQ641Q2 1341 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 FGD6Q6ZV73 1430 aa8.96□□□□□ -0.97
SCAPER-203ENST00000538941 MAPKBP1O60336 1514 aa8.96□□□□□ -0.97
SCAPER-203ENST00000538941 CCDC7Q96M83 1385 aa8.96□□□□□ -0.98
SCAPER-203ENST00000538941 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
SCAPER-203ENST00000538941 PDE4AP27815 886 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 FOXD1Q16676 465 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-203ENST00000538941 RALBP1Q15311 655 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 ROCK2O75116 1388 aaKnown RBP8.94□□□□□ -0.98
SCAPER-203ENST00000538941 MAP3K1Q13233 1512 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 IGF1RP08069 1367 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 CUX1P39880 1505 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 ARXQ96QS3 562 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms