RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 JPH4Q96JJ6 628 aa35.16■■■■□ 3.22
MSRB3-208ENST00000538725 PRG4Q92954 1404 aaPredicted RBP35.08■■■■□ 3.21
MSRB3-208ENST00000538725 CUL7Q14999 1698 aa35.03■■■■□ 3.2
MSRB3-208ENST00000538725 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.2
MSRB3-208ENST00000538725 CARMIL1Q5VZK9 1371 aa34.95■■■■□ 3.19
MSRB3-208ENST00000538725 KIAA0586Q9BVV6 1533 aa34.95■■■■□ 3.19
MSRB3-208ENST00000538725 NPM1P06748 294 aaKnown RBP eCLIP34.72■■■■□ 3.15
MSRB3-208ENST00000538725 RAPGEF2Q9Y4G8 1499 aa34.63■■■■□ 3.13
MSRB3-208ENST00000538725 ADCY10Q96PN6 1610 aa34.61■■■■□ 3.13
MSRB3-208ENST00000538725 CARMIL2Q6F5E8 1435 aa34.61■■■■□ 3.13
MSRB3-208ENST00000538725 IQGAP2Q13576 1575 aa34.61■■■■□ 3.13
MSRB3-208ENST00000538725 PTPRGP23470 1445 aa34.59■■■■□ 3.13
MSRB3-208ENST00000538725 KIF13AQ9H1H9 1805 aa34.57■■■■□ 3.12
MSRB3-208ENST00000538725 TNIKQ9UKE5 1360 aa34.55■■■■□ 3.12
MSRB3-208ENST00000538725 MAPKBP1O60336 1514 aa34.53■■■■□ 3.12
MSRB3-208ENST00000538725 TTBK1Q5TCY1 1321 aaPredicted RBP34.53■■■■□ 3.12
MSRB3-208ENST00000538725 FAM69CQ0P6D2 419 aa34.51■■■■□ 3.12
MSRB3-208ENST00000538725 ABCC10Q5T3U5 1492 aa34.5■■■■□ 3.11
MSRB3-208ENST00000538725 DISP1Q96F81 1524 aa34.44■■■■□ 3.1
MSRB3-208ENST00000538725 UGGT2Q9NYU1 1516 aa34.41■■■■□ 3.1
MSRB3-208ENST00000538725 DIP2BQ9P265 1576 aa34.37■■■■□ 3.09
MSRB3-208ENST00000538725 ABCC2Q92887 1545 aa34.34■■■■□ 3.09
MSRB3-208ENST00000538725 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
MSRB3-208ENST00000538725 UACAQ9BZF9 1416 aa34.32■■■■□ 3.08
MSRB3-208ENST00000538725 UHRF1BP1LA0JNW5 1464 aa34.32■■■■□ 3.08
MSRB3-208ENST00000538725 CTTNBP2Q8WZ74 1663 aa34.28■■■■□ 3.08
MSRB3-208ENST00000538725 KIAA0556O60303 1618 aa34.27■■■■□ 3.08
MSRB3-208ENST00000538725 ASXL2Q76L83 1435 aa34.21■■■■□ 3.07
MSRB3-208ENST00000538725 PLB1Q6P1J6 1458 aa34.2■■■■□ 3.07
MSRB3-208ENST00000538725 CSRNP3Q8WYN3 585 aa34.19■■■■□ 3.06
MSRB3-208ENST00000538725 GOLGA3Q08378 1498 aa34.18■■■■□ 3.06
MSRB3-208ENST00000538725 KDM5BQ9UGL1 1544 aa34.16■■■■□ 3.06
MSRB3-208ENST00000538725 TSPOAP1O95153 1857 aa34.16■■■■□ 3.06
MSRB3-208ENST00000538725 GLI2P10070 1586 aa34.08■■■■□ 3.05
MSRB3-208ENST00000538725 ZCCHC11Q5TAX3 1644 aaKnown RBP34.06■■■■□ 3.04
MSRB3-208ENST00000538725 EEA1Q15075 1411 aa34.04■■■■□ 3.04
MSRB3-208ENST00000538725 KDM6BO15054 1643 aa34.02■■■■□ 3.04
MSRB3-208ENST00000538725 EPRSP07814 1512 aaKnown RBP33.99■■■■□ 3.03
MSRB3-208ENST00000538725 FAM9AQ8IZU1 332 aaPredicted RBP33.98■■■■□ 3.03
MSRB3-208ENST00000538725 ABCA8O94911 1581 aa33.97■■■■□ 3.03
MSRB3-208ENST00000538725 P3H3Q8IVL6 736 aa33.94■■■■□ 3.02
MSRB3-208ENST00000538725 PPRC1Q5VV67 1664 aaKnown RBP33.93■■■■□ 3.02
MSRB3-208ENST00000538725 WDR7Q9Y4E6 1490 aa33.89■■■■□ 3.02
MSRB3-208ENST00000538725 MAP3K4Q9Y6R4 1608 aa33.88■■■■□ 3.01
MSRB3-208ENST00000538725 SAMD9Q5K651 1589 aa33.81■■■■□ 3
MSRB3-208ENST00000538725 KCNH8Q96L42 1107 aa33.81■■■■□ 3
MSRB3-208ENST00000538725 TEX14Q8IWB6 1497 aa33.8■■■■□ 3
MSRB3-208ENST00000538725 SENP3Q9H4L4 574 aaPredicted RBP33.76■■■□□ 2.99
MSRB3-208ENST00000538725 RANGAP1P46060 587 aaPredicted RBP33.74■■■□□ 2.99
MSRB3-208ENST00000538725 ATP10BO94823 1461 aa33.73■■■□□ 2.99
MSRB3-208ENST00000538725 ARID3CA6NKF2 412 aa33.72■■■□□ 2.99
MSRB3-208ENST00000538725 COL17A1Q9UMD9 1497 aaPredicted RBP33.71■■■□□ 2.99
MSRB3-208ENST00000538725 CD109Q6YHK3 1445 aa33.7■■■□□ 2.99
MSRB3-208ENST00000538725 KIF21BO75037 1637 aa33.7■■■□□ 2.99
MSRB3-208ENST00000538725 CFAP43Q8NDM7 1665 aa33.68■■■□□ 2.98
MSRB3-208ENST00000538725 MAGI3Q5TCQ9 1506 aa33.65■■■□□ 2.98
MSRB3-208ENST00000538725 KDM4FA0A1W2PPD8 638 aa33.65■■■□□ 2.98
MSRB3-208ENST00000538725 RAPGEF6Q8TEU7 1601 aa33.64■■■□□ 2.98
MSRB3-208ENST00000538725 FHOD3Q2V2M9 1422 aa33.61■■■□□ 2.97
MSRB3-208ENST00000538725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.58■■■□□ 2.97
MSRB3-208ENST00000538725 HNRNPUL2Q1KMD3 747 aaKnown RBP33.58■■■□□ 2.97
MSRB3-208ENST00000538725 UBTFP17480 764 aaKnown RBP33.55■■■□□ 2.96
MSRB3-208ENST00000538725 PHF23Q9BUL5 403 aaPredicted RBP33.54■■■□□ 2.96
MSRB3-208ENST00000538725 EFCAB5A4FU69 1503 aa33.53■■■□□ 2.96
MSRB3-208ENST00000538725 NUP153P49790 1475 aaKnown RBP33.53■■■□□ 2.96
MSRB3-208ENST00000538725 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
MSRB3-208ENST00000538725 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
MSRB3-208ENST00000538725 PLEKHD1A6NEE1 506 aa33.43■■■□□ 2.94
MSRB3-208ENST00000538725 ARAP3Q8WWN8 1544 aa33.39■■■□□ 2.94
MSRB3-208ENST00000538725 PHLDB1Q86UU1 1377 aa33.39■■■□□ 2.94
MSRB3-208ENST00000538725 ADGRL1O94910 1474 aa33.37■■■□□ 2.93
MSRB3-208ENST00000538725 NEO1Q92859 1461 aa33.29■■■□□ 2.92
MSRB3-208ENST00000538725 ARHGAP35Q9NRY4 1499 aa33.29■■■□□ 2.92
MSRB3-208ENST00000538725 FMN1Q68DA7 1419 aa33.28■■■□□ 2.92
MSRB3-208ENST00000538725 ATP1B4Q9UN42 357 aaPredicted RBP33.24■■■□□ 2.91
MSRB3-208ENST00000538725 RAPGEF3O95398 923 aa33.23■■■□□ 2.91
MSRB3-208ENST00000538725 CDK13Q14004 1512 aaKnown RBP33.21■■■□□ 2.91
MSRB3-208ENST00000538725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.18■■■□□ 2.9
MSRB3-208ENST00000538725 HECW1Q76N89 1606 aa33.14■■■□□ 2.9
MSRB3-208ENST00000538725 CDK11AQ9UQ88 783 aaPredicted RBP33.13■■■□□ 2.89
MSRB3-208ENST00000538725 AKNAQ7Z591 1439 aa33.11■■■□□ 2.89
MSRB3-208ENST00000538725 FANCAO15360 1455 aa33.1■■■□□ 2.89
MSRB3-208ENST00000538725 TTC37Q6PGP7 1564 aa33.09■■■□□ 2.89
MSRB3-208ENST00000538725 CFAP74Q9C0B2 1584 aa33.07■■■□□ 2.88
MSRB3-208ENST00000538725 DENND4BO75064 1496 aaPredicted RBP33.06■■■□□ 2.88
MSRB3-208ENST00000538725 FRMPD1Q5SYB0 1578 aa33.06■■■□□ 2.88
MSRB3-208ENST00000538725 PLCH2O75038 1416 aa33.02■■■□□ 2.88
MSRB3-208ENST00000538725 RICTORQ6R327 1708 aa32.99■■■□□ 2.87
MSRB3-208ENST00000538725 TROQ12816 1431 aaPredicted RBP32.95■■■□□ 2.87
MSRB3-208ENST00000538725 LRRIQ1Q96JM4 1722 aa32.95■■■□□ 2.87
MSRB3-208ENST00000538725 EFCAB2Q5VUJ9 269 aa32.94■■■□□ 2.86
MSRB3-208ENST00000538725 CASKIN1Q8WXD9 1431 aa32.94■■■□□ 2.86
MSRB3-208ENST00000538725 ARID4BQ4LE39 1312 aaPredicted RBP32.92■■■□□ 2.86
MSRB3-208ENST00000538725 CLIP1P30622 1438 aa32.92■■■□□ 2.86
MSRB3-208ENST00000538725 SCAPERQ9BY12 1400 aa32.9■■■□□ 2.86
MSRB3-208ENST00000538725 KIF14Q15058 1648 aa32.9■■■□□ 2.86
MSRB3-208ENST00000538725 MYO5CQ9NQX4 1742 aa32.9■■■□□ 2.86
MSRB3-208ENST00000538725 ADAMTSL3P82987 1691 aa32.88■■■□□ 2.85
MSRB3-208ENST00000538725 ARHGEF40Q8TER5 1519 aa32.87■■■□□ 2.85
MSRB3-208ENST00000538725 PCF11O94913 1555 aaKnown RBP32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms