RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 CFAP44Q96MT7 982 aa9.02□□□□□ -0.97
SORT1-209ENST00000538502 DEKP35659 375 aaKnown RBP9.01□□□□□ -0.97
SORT1-209ENST00000538502 CHAF1AQ13111 956 aaPredicted RBP9.01□□□□□ -0.97
SORT1-209ENST00000538502 ZRSR1Q15695 479 aaKnown RBP9.01□□□□□ -0.97
SORT1-209ENST00000538502 ZCCHC6Q5VYS8 1495 aaKnown RBP9.01□□□□□ -0.97
SORT1-209ENST00000538502 GOLGA3Q08378 1498 aa9□□□□□ -0.97
SORT1-209ENST00000538502 NRDCO43847 1150 aa9□□□□□ -0.97
SORT1-209ENST00000538502 MS4A1P11836 297 aa9□□□□□ -0.97
SORT1-209ENST00000538502 IRX6P78412 446 aaPredicted RBP8.99□□□□□ -0.97
SORT1-209ENST00000538502 RSF1Q96T23 1441 aaPredicted RBP8.99□□□□□ -0.97
SORT1-209ENST00000538502 MSNP26038 577 aaKnown RBP8.99□□□□□ -0.97
SORT1-209ENST00000538502 CLIP1P30622 1438 aa8.99□□□□□ -0.97
SORT1-209ENST00000538502 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
SORT1-209ENST00000538502 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
SORT1-209ENST00000538502 ZNF777Q9ULD5 760 aaPredicted RBP8.97□□□□□ -0.97
SORT1-209ENST00000538502 SALL2Q9Y467 1007 aaPredicted RBP8.97□□□□□ -0.97
SORT1-209ENST00000538502 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.97
SORT1-209ENST00000538502 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
SORT1-209ENST00000538502 CFAP53Q96M91 514 aa8.94□□□□□ -0.98
SORT1-209ENST00000538502 MTUS2Q5JR59 1369 aa8.94□□□□□ -0.98
SORT1-209ENST00000538502 LAS1LQ9Y4W2 734 aaKnown RBP8.94□□□□□ -0.98
SORT1-209ENST00000538502 CEP162Q5TB80 1403 aa8.93□□□□□ -0.98
SORT1-209ENST00000538502 HSP90AB1P08238 724 aaKnown RBP8.93□□□□□ -0.98
SORT1-209ENST00000538502 HSCBQ8IWL3 235 aa8.93□□□□□ -0.98
SORT1-209ENST00000538502 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
SORT1-209ENST00000538502 ARID4BQ4LE39 1312 aaPredicted RBP8.92□□□□□ -0.98
SORT1-209ENST00000538502 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
SORT1-209ENST00000538502 FTSJ3Q8IY81 847 aaKnown RBP8.91□□□□□ -0.98
SORT1-209ENST00000538502 TNIKQ9UKE5 1360 aa8.91□□□□□ -0.98
SORT1-209ENST00000538502 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
SORT1-209ENST00000538502 TSPY4P0CV99 314 aa8.9□□□□□ -0.98
SORT1-209ENST00000538502 TSPY10P0CW01 314 aa8.9□□□□□ -0.98
SORT1-209ENST00000538502 SCRIBQ14160 1630 aa8.9□□□□□ -0.99
SORT1-209ENST00000538502 USP35Q9P2H5 1018 aa8.9□□□□□ -0.99
SORT1-209ENST00000538502 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
SORT1-209ENST00000538502 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
SORT1-209ENST00000538502 TCERG1O14776 1098 aaKnown RBP8.89□□□□□ -0.99
SORT1-209ENST00000538502 GBP4Q96PP9 640 aa8.89□□□□□ -0.99
SORT1-209ENST00000538502 CEP164Q9UPV0 1460 aa8.88□□□□□ -0.99
SORT1-209ENST00000538502 ABCC9O60706 1549 aa8.88□□□□□ -0.99
SORT1-209ENST00000538502 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
SORT1-209ENST00000538502 ESF1Q9H501 851 aaKnown RBP8.88□□□□□ -0.99
SORT1-209ENST00000538502 KNSTRNQ9Y448 316 aa8.87□□□□□ -0.99
SORT1-209ENST00000538502 MCCP23508 829 aa8.86□□□□□ -0.99
SORT1-209ENST00000538502 FBLN2P98095 1184 aa8.86□□□□□ -0.99
SORT1-209ENST00000538502 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
SORT1-209ENST00000538502 KIAA2012Q0VF49 1180 aa8.86□□□□□ -0.99
SORT1-209ENST00000538502 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
SORT1-209ENST00000538502 SYAP1Q96A49 352 aaPredicted RBP8.85□□□□□ -0.99
SORT1-209ENST00000538502 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
SORT1-209ENST00000538502 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
SORT1-209ENST00000538502 IPO9Q96P70 1041 aaKnown RBP8.84□□□□□ -0.99
SORT1-209ENST00000538502 NUDCQ9Y266 331 aa8.83□□□□□ -1
SORT1-209ENST00000538502 GOLGA6L3A6NEY3 463 aa8.83□□□□□ -1
SORT1-209ENST00000538502 GOLGA6L4A6NEF3 574 aa8.82□□□□□ -1
SORT1-209ENST00000538502 B4GALNT3Q6L9W6 998 aa8.82□□□□□ -1
SORT1-209ENST00000538502 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
SORT1-209ENST00000538502 RGS3P49796 1198 aa8.82□□□□□ -1
SORT1-209ENST00000538502 PLCB2Q00722 1185 aa8.81□□□□□ -1
SORT1-209ENST00000538502 TSHZ2Q9NRE2 1034 aa8.81□□□□□ -1
SORT1-209ENST00000538502 TNNT3P45378 269 aaPredicted RBP8.81□□□□□ -1
SORT1-209ENST00000538502 ARID3CA6NKF2 412 aa8.81□□□□□ -1
SORT1-209ENST00000538502 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
SORT1-209ENST00000538502 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
SORT1-209ENST00000538502 DRC7Q8IY82 874 aa8.8□□□□□ -1
SORT1-209ENST00000538502 CARD11Q9BXL7 1154 aa8.8□□□□□ -1
SORT1-209ENST00000538502 HSP90AA2PQ14568 343 aaPredicted RBP8.79□□□□□ -1
SORT1-209ENST00000538502 CSPP1Q1MSJ5 1256 aa8.79□□□□□ -1
SORT1-209ENST00000538502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -11e-7■■■□□ 14.7
SORT1-209ENST00000538502 HIRIP3Q9BW71 556 aaPredicted RBP8.79□□□□□ -1
SORT1-209ENST00000538502 RB1CC1Q8TDY2 1594 aa8.78□□□□□ -1
SORT1-209ENST00000538502 FHAD1B1AJZ9 1412 aa8.78□□□□□ -1
SORT1-209ENST00000538502 PHF14O94880 888 aa8.77□□□□□ -1.01
SORT1-209ENST00000538502 TPM4P67936 248 aa8.77□□□□□ -1.01
SORT1-209ENST00000538502 DDX11L8A8MPP1 907 aa8.77□□□□□ -1.01
SORT1-209ENST00000538502 CCNB3Q8WWL7 1395 aa8.77□□□□□ -1.01
SORT1-209ENST00000538502 PMFBP1Q8TBY8 1022 aa8.77□□□□□ -1.01
SORT1-209ENST00000538502 GOLGA6L1Q8N7Z2 621 aa8.76□□□□□ -1.01
SORT1-209ENST00000538502 FANCIQ9NVI1 1328 aa8.76□□□□□ -1.01
SORT1-209ENST00000538502 RRP7BPQ9NSQ0 103 aa8.76□□□□□ -1.01
SORT1-209ENST00000538502 RWDD1Q9H446 243 aaPredicted RBP8.75□□□□□ -1.01
SORT1-209ENST00000538502 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
SORT1-209ENST00000538502 KIF27Q86VH2 1401 aa8.75□□□□□ -1.01
SORT1-209ENST00000538502 TMF1P82094 1093 aa8.75□□□□□ -1.01
SORT1-209ENST00000538502 RALBP1Q15311 655 aa8.75□□□□□ -1.01
SORT1-209ENST00000538502 SKOR2Q2VWA4 1001 aaPredicted RBP8.75□□□□□ -1.01
SORT1-209ENST00000538502 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
SORT1-209ENST00000538502 IPO8O15397 1037 aaKnown RBP8.74□□□□□ -1.01
SORT1-209ENST00000538502 SETQ01105 290 aaPredicted RBP8.74□□□□□ -1.01
SORT1-209ENST00000538502 KTN1Q86UP2 1357 aaKnown RBP8.74□□□□□ -1.01
SORT1-209ENST00000538502 FRAT1Q92837 279 aaPredicted RBP8.74□□□□□ -1.01
SORT1-209ENST00000538502 PHLDB1Q86UU1 1377 aa8.74□□□□□ -1.01
SORT1-209ENST00000538502 PDE3BQ13370 1112 aa8.74□□□□□ -1.01
SORT1-209ENST00000538502 WRNQ14191 1432 aaPredicted RBP eCLIP8.74□□□□□ -1.01
SORT1-209ENST00000538502 FGD1P98174 961 aa8.73□□□□□ -1.01
SORT1-209ENST00000538502 KCNJ4P48050 445 aa8.73□□□□□ -1.01
SORT1-209ENST00000538502 RCAN3Q9UKA8 241 aa8.73□□□□□ -1.01
SORT1-209ENST00000538502 CALD1Q05682 793 aaKnown RBP8.72□□□□□ -1.01
SORT1-209ENST00000538502 GSE1Q14687 1217 aa8.71□□□□□ -1.02
SORT1-209ENST00000538502 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms