RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
LRTOMT-215ENST00000538478 SOGA1O94964 1423 aa12.69□□□□□ -0.38
LRTOMT-215ENST00000538478 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
LRTOMT-215ENST00000538478 GRIN2BQ13224 1484 aa12.64□□□□□ -0.39
LRTOMT-215ENST00000538478 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
LRTOMT-215ENST00000538478 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
LRTOMT-215ENST00000538478 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
LRTOMT-215ENST00000538478 PBRM1Q86U86 1689 aa12.59□□□□□ -0.39
LRTOMT-215ENST00000538478 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
LRTOMT-215ENST00000538478 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
LRTOMT-215ENST00000538478 ABCC10Q5T3U5 1492 aa12.56□□□□□ -0.4
LRTOMT-215ENST00000538478 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
LRTOMT-215ENST00000538478 KDM6BO15054 1643 aa12.55□□□□□ -0.4
LRTOMT-215ENST00000538478 TSPOAP1O95153 1857 aa12.55□□□□□ -0.4
LRTOMT-215ENST00000538478 SHROOM2Q13796 1616 aa12.54□□□□□ -0.4
LRTOMT-215ENST00000538478 CUX1P39880 1505 aa12.52□□□□□ -0.4
LRTOMT-215ENST00000538478 DIP2BQ9P265 1576 aa12.52□□□□□ -0.4
LRTOMT-215ENST00000538478 NUP160Q12769 1436 aa12.5□□□□□ -0.41
LRTOMT-215ENST00000538478 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
LRTOMT-215ENST00000538478 GRIN2AQ12879 1464 aa12.49□□□□□ -0.41
LRTOMT-215ENST00000538478 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
LRTOMT-215ENST00000538478 FBXO41Q8TF61 875 aa12.48□□□□□ -0.41
LRTOMT-215ENST00000538478 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
LRTOMT-215ENST00000538478 MAPKBP1O60336 1514 aa12.46□□□□□ -0.42
LRTOMT-215ENST00000538478 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
LRTOMT-215ENST00000538478 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
LRTOMT-215ENST00000538478 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
LRTOMT-215ENST00000538478 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
LRTOMT-215ENST00000538478 PPRC1Q5VV67 1664 aaKnown RBP12.38□□□□□ -0.43
LRTOMT-215ENST00000538478 LMTK3Q96Q04 1460 aa12.35□□□□□ -0.43
LRTOMT-215ENST00000538478 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
LRTOMT-215ENST00000538478 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
LRTOMT-215ENST00000538478 JPH4Q96JJ6 628 aa12.35□□□□□ -0.43
LRTOMT-215ENST00000538478 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
LRTOMT-215ENST00000538478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.44
LRTOMT-215ENST00000538478 FHAD1B1AJZ9 1412 aa12.31□□□□□ -0.44
LRTOMT-215ENST00000538478 SOCS7O14512 581 aa12.27□□□□□ -0.45
LRTOMT-215ENST00000538478 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
LRTOMT-215ENST00000538478 GLI2P10070 1586 aa12.22□□□□□ -0.45
LRTOMT-215ENST00000538478 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
LRTOMT-215ENST00000538478 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
LRTOMT-215ENST00000538478 ASXL2Q76L83 1435 aa12.19□□□□□ -0.46
LRTOMT-215ENST00000538478 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
LRTOMT-215ENST00000538478 TOP2BQ02880 1626 aa12.18□□□□□ -0.46
LRTOMT-215ENST00000538478 MAP3K4Q9Y6R4 1608 aa12.16□□□□□ -0.46
LRTOMT-215ENST00000538478 CUL7Q14999 1698 aa12.15□□□□□ -0.46
LRTOMT-215ENST00000538478 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.46
LRTOMT-215ENST00000538478 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
LRTOMT-215ENST00000538478 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
LRTOMT-215ENST00000538478 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
LRTOMT-215ENST00000538478 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
LRTOMT-215ENST00000538478 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
LRTOMT-215ENST00000538478 KIF21BO75037 1637 aa12.11□□□□□ -0.47
LRTOMT-215ENST00000538478 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
LRTOMT-215ENST00000538478 PTPRGP23470 1445 aa12.11□□□□□ -0.47
LRTOMT-215ENST00000538478 KIAA0586Q9BVV6 1533 aa12.1□□□□□ -0.47
LRTOMT-215ENST00000538478 TTBK1Q5TCY1 1321 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-215ENST00000538478 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
LRTOMT-215ENST00000538478 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-215ENST00000538478 TEX14Q8IWB6 1497 aa12.08□□□□□ -0.48
LRTOMT-215ENST00000538478 PTPRMP28827 1452 aa12.07□□□□□ -0.48
LRTOMT-215ENST00000538478 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
LRTOMT-215ENST00000538478 ZBTB22O15209 634 aa12.05□□□□□ -0.48
LRTOMT-215ENST00000538478 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
LRTOMT-215ENST00000538478 UHRF1BP1LA0JNW5 1464 aa12.04□□□□□ -0.48
LRTOMT-215ENST00000538478 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
LRTOMT-215ENST00000538478 TNIKQ9UKE5 1360 aa12.03□□□□□ -0.48
LRTOMT-215ENST00000538478 KDM5BQ9UGL1 1544 aa12.01□□□□□ -0.49
LRTOMT-215ENST00000538478 ZCCHC11Q5TAX3 1644 aaKnown RBP12□□□□□ -0.49
LRTOMT-215ENST00000538478 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
LRTOMT-215ENST00000538478 UACAQ9BZF9 1416 aa12□□□□□ -0.49
LRTOMT-215ENST00000538478 SPATA31D1Q6ZQQ2 1576 aa12□□□□□ -0.49
LRTOMT-215ENST00000538478 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
LRTOMT-215ENST00000538478 HSPA2P54652 639 aa11.99□□□□□ -0.49
LRTOMT-215ENST00000538478 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.49
LRTOMT-215ENST00000538478 IGF1RP08069 1367 aa11.95□□□□□ -0.5
LRTOMT-215ENST00000538478 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
LRTOMT-215ENST00000538478 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
LRTOMT-215ENST00000538478 DISP1Q96F81 1524 aa11.94□□□□□ -0.5
LRTOMT-215ENST00000538478 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
LRTOMT-215ENST00000538478 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
LRTOMT-215ENST00000538478 CFAP43Q8NDM7 1665 aa11.93□□□□□ -0.5
LRTOMT-215ENST00000538478 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
LRTOMT-215ENST00000538478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
LRTOMT-215ENST00000538478 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
LRTOMT-215ENST00000538478 RIMS1Q86UR5 1692 aaKnown RBP11.9□□□□□ -0.5
LRTOMT-215ENST00000538478 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
LRTOMT-215ENST00000538478 ARAP3Q8WWN8 1544 aa11.89□□□□□ -0.51
LRTOMT-215ENST00000538478 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
LRTOMT-215ENST00000538478 KCNH8Q96L42 1107 aa11.88□□□□□ -0.51
LRTOMT-215ENST00000538478 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
LRTOMT-215ENST00000538478 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
LRTOMT-215ENST00000538478 APLP2Q06481 763 aa11.84□□□□□ -0.51
LRTOMT-215ENST00000538478 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
LRTOMT-215ENST00000538478 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
LRTOMT-215ENST00000538478 CARMIL1Q5VZK9 1371 aa11.81□□□□□ -0.52
LRTOMT-215ENST00000538478 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
LRTOMT-215ENST00000538478 SIGLEC1Q9BZZ2 1709 aa11.8□□□□□ -0.52
LRTOMT-215ENST00000538478 KIAA0556O60303 1618 aa11.8□□□□□ -0.52
LRTOMT-215ENST00000538478 UGGT2Q9NYU1 1516 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms