RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
CDK2AP1-204ENST00000538446 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
CDK2AP1-204ENST00000538446 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
CDK2AP1-204ENST00000538446 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
CDK2AP1-204ENST00000538446 IQGAP2Q13576 1575 aa20.77■□□□□ 0.92
CDK2AP1-204ENST00000538446 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
CDK2AP1-204ENST00000538446 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
CDK2AP1-204ENST00000538446 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
CDK2AP1-204ENST00000538446 CTTNBP2Q8WZ74 1663 aa20.72■□□□□ 0.91
CDK2AP1-204ENST00000538446 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
CDK2AP1-204ENST00000538446 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
CDK2AP1-204ENST00000538446 CARMIL2Q6F5E8 1435 aa20.67■□□□□ 0.9
CDK2AP1-204ENST00000538446 TNIKQ9UKE5 1360 aa20.65■□□□□ 0.9
CDK2AP1-204ENST00000538446 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
CDK2AP1-204ENST00000538446 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.89
CDK2AP1-204ENST00000538446 RIMBP3CA6NJZ7 1639 aa20.62■□□□□ 0.89
CDK2AP1-204ENST00000538446 RIMBP3BA6NNM3 1639 aa20.62■□□□□ 0.89
CDK2AP1-204ENST00000538446 RIMBP3Q9UFD9 1639 aa20.62■□□□□ 0.89
CDK2AP1-204ENST00000538446 ERCC6L2Q5T890 1561 aa20.62■□□□□ 0.89
CDK2AP1-204ENST00000538446 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
CDK2AP1-204ENST00000538446 KIAA0556O60303 1618 aa20.56■□□□□ 0.88
CDK2AP1-204ENST00000538446 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
CDK2AP1-204ENST00000538446 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
CDK2AP1-204ENST00000538446 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
CDK2AP1-204ENST00000538446 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
CDK2AP1-204ENST00000538446 PTPRGP23470 1445 aa20.53■□□□□ 0.88
CDK2AP1-204ENST00000538446 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
CDK2AP1-204ENST00000538446 SAMD9Q5K651 1589 aa20.52■□□□□ 0.88
CDK2AP1-204ENST00000538446 CLIP1P30622 1438 aa20.5■□□□□ 0.87
CDK2AP1-204ENST00000538446 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
CDK2AP1-204ENST00000538446 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
CDK2AP1-204ENST00000538446 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
CDK2AP1-204ENST00000538446 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
CDK2AP1-204ENST00000538446 FMN1Q68DA7 1419 aa20.37■□□□□ 0.85
CDK2AP1-204ENST00000538446 PLB1Q6P1J6 1458 aa20.36■□□□□ 0.85
CDK2AP1-204ENST00000538446 UHRF1BP1LA0JNW5 1464 aa20.33■□□□□ 0.85
CDK2AP1-204ENST00000538446 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
CDK2AP1-204ENST00000538446 ABCA8O94911 1581 aa20.32■□□□□ 0.84
CDK2AP1-204ENST00000538446 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
CDK2AP1-204ENST00000538446 ADCY10Q96PN6 1610 aa20.29■□□□□ 0.84
CDK2AP1-204ENST00000538446 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.83
CDK2AP1-204ENST00000538446 ATP1B4Q9UN42 357 aaPredicted RBP20.25■□□□□ 0.83
CDK2AP1-204ENST00000538446 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
CDK2AP1-204ENST00000538446 CASKIN1Q8WXD9 1431 aa20.23■□□□□ 0.83
CDK2AP1-204ENST00000538446 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
CDK2AP1-204ENST00000538446 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
CDK2AP1-204ENST00000538446 VPS8Q8N3P4 1428 aa20.2■□□□□ 0.82
CDK2AP1-204ENST00000538446 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
CDK2AP1-204ENST00000538446 HECW1Q76N89 1606 aa20.2■□□□□ 0.82
CDK2AP1-204ENST00000538446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
CDK2AP1-204ENST00000538446 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
CDK2AP1-204ENST00000538446 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
CDK2AP1-204ENST00000538446 ATP10BO94823 1461 aa20.18■□□□□ 0.82
CDK2AP1-204ENST00000538446 ZCCHC11Q5TAX3 1644 aaKnown RBP20.14■□□□□ 0.81
CDK2AP1-204ENST00000538446 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
CDK2AP1-204ENST00000538446 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
CDK2AP1-204ENST00000538446 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
CDK2AP1-204ENST00000538446 ASXL2Q76L83 1435 aa20.12■□□□□ 0.81
CDK2AP1-204ENST00000538446 CDK13Q14004 1512 aaKnown RBP20.11■□□□□ 0.81
CDK2AP1-204ENST00000538446 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
CDK2AP1-204ENST00000538446 WDR7Q9Y4E6 1490 aa20.08■□□□□ 0.81
CDK2AP1-204ENST00000538446 PLEKHD1A6NEE1 506 aa20.08■□□□□ 0.81
CDK2AP1-204ENST00000538446 APLP2Q06481 763 aa20.04■□□□□ 0.8
CDK2AP1-204ENST00000538446 TRHP20396 242 aaPredicted RBP20.02■□□□□ 0.8
CDK2AP1-204ENST00000538446 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
CDK2AP1-204ENST00000538446 ABCC10Q5T3U5 1492 aa20.02■□□□□ 0.8
CDK2AP1-204ENST00000538446 FAM69CQ0P6D2 419 aa19.99■□□□□ 0.79
CDK2AP1-204ENST00000538446 TROQ12816 1431 aaPredicted RBP19.99■□□□□ 0.79
CDK2AP1-204ENST00000538446 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
CDK2AP1-204ENST00000538446 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
CDK2AP1-204ENST00000538446 MAP3K1Q13233 1512 aa19.97■□□□□ 0.79
CDK2AP1-204ENST00000538446 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
CDK2AP1-204ENST00000538446 DIP2BQ9P265 1576 aa19.95■□□□□ 0.78
CDK2AP1-204ENST00000538446 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
CDK2AP1-204ENST00000538446 MAGI3Q5TCQ9 1506 aa19.92■□□□□ 0.78
CDK2AP1-204ENST00000538446 GLI2P10070 1586 aa19.92■□□□□ 0.78
CDK2AP1-204ENST00000538446 EHBP1L1Q8N3D4 1523 aa19.91■□□□□ 0.78
CDK2AP1-204ENST00000538446 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
CDK2AP1-204ENST00000538446 KIF14Q15058 1648 aa19.89■□□□□ 0.77
CDK2AP1-204ENST00000538446 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
CDK2AP1-204ENST00000538446 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
CDK2AP1-204ENST00000538446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.85■□□□□ 0.77
CDK2AP1-204ENST00000538446 ABCA9Q8IUA7 1624 aa19.84■□□□□ 0.77
CDK2AP1-204ENST00000538446 KIF13AQ9H1H9 1805 aa19.83■□□□□ 0.76
CDK2AP1-204ENST00000538446 MAP3K4Q9Y6R4 1608 aa19.82■□□□□ 0.76
CDK2AP1-204ENST00000538446 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
CDK2AP1-204ENST00000538446 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
CDK2AP1-204ENST00000538446 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
CDK2AP1-204ENST00000538446 TEX14Q8IWB6 1497 aa19.78■□□□□ 0.76
CDK2AP1-204ENST00000538446 PLCH2O75038 1416 aa19.77■□□□□ 0.76
CDK2AP1-204ENST00000538446 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
CDK2AP1-204ENST00000538446 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
CDK2AP1-204ENST00000538446 GPATCH8Q9UKJ3 1502 aaKnown RBP19.73■□□□□ 0.75
CDK2AP1-204ENST00000538446 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
CDK2AP1-204ENST00000538446 PPARGC1BQ86YN6 1023 aaKnown RBP19.73■□□□□ 0.75
CDK2AP1-204ENST00000538446 CFDP1Q9UEE9 299 aaPredicted RBP19.72■□□□□ 0.75
CDK2AP1-204ENST00000538446 FANCAO15360 1455 aa19.72■□□□□ 0.75
CDK2AP1-204ENST00000538446 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
CDK2AP1-204ENST00000538446 NEO1Q92859 1461 aa19.7■□□□□ 0.74
CDK2AP1-204ENST00000538446 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms