RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 FAM9AQ8IZU1 332 aaPredicted RBP22.06■■□□□ 1.12
COPS7A-207ENST00000538375 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
COPS7A-207ENST00000538375 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
COPS7A-207ENST00000538375 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
COPS7A-207ENST00000538375 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
COPS7A-207ENST00000538375 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
COPS7A-207ENST00000538375 EEA1Q15075 1411 aa21.91■■□□□ 1.1
COPS7A-207ENST00000538375 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
COPS7A-207ENST00000538375 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
COPS7A-207ENST00000538375 SHROOM2Q13796 1616 aa21.87■■□□□ 1.09
COPS7A-207ENST00000538375 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
COPS7A-207ENST00000538375 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
COPS7A-207ENST00000538375 IQGAP2Q13576 1575 aa21.79■■□□□ 1.08
COPS7A-207ENST00000538375 CARMIL2Q6F5E8 1435 aa21.76■■□□□ 1.07
COPS7A-207ENST00000538375 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
COPS7A-207ENST00000538375 UBTFP17480 764 aaKnown RBP21.7■■□□□ 1.06
COPS7A-207ENST00000538375 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
COPS7A-207ENST00000538375 PTPRGP23470 1445 aa21.68■■□□□ 1.06
COPS7A-207ENST00000538375 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
COPS7A-207ENST00000538375 UGGT2Q9NYU1 1516 aa21.65■■□□□ 1.06
COPS7A-207ENST00000538375 NPM1P06748 294 aaKnown RBP eCLIP21.65■■□□□ 1.06
COPS7A-207ENST00000538375 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
COPS7A-207ENST00000538375 KIF21BO75037 1637 aa21.63■■□□□ 1.05
COPS7A-207ENST00000538375 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
COPS7A-207ENST00000538375 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
COPS7A-207ENST00000538375 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
COPS7A-207ENST00000538375 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
COPS7A-207ENST00000538375 UACAQ9BZF9 1416 aa21.49■■□□□ 1.03
COPS7A-207ENST00000538375 ADCY10Q96PN6 1610 aa21.48■■□□□ 1.03
COPS7A-207ENST00000538375 ABCC10Q5T3U5 1492 aa21.48■■□□□ 1.03
COPS7A-207ENST00000538375 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
COPS7A-207ENST00000538375 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
COPS7A-207ENST00000538375 FAM69CQ0P6D2 419 aa21.45■■□□□ 1.02
COPS7A-207ENST00000538375 PLB1Q6P1J6 1458 aa21.42■■□□□ 1.02
COPS7A-207ENST00000538375 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
COPS7A-207ENST00000538375 UHRF1BP1LA0JNW5 1464 aa21.4■■□□□ 1.02
COPS7A-207ENST00000538375 FHOD3Q2V2M9 1422 aa21.4■■□□□ 1.02
COPS7A-207ENST00000538375 ARID3CA6NKF2 412 aa21.4■■□□□ 1.02
COPS7A-207ENST00000538375 ABCC2Q92887 1545 aa21.39■■□□□ 1.02
COPS7A-207ENST00000538375 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
COPS7A-207ENST00000538375 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
COPS7A-207ENST00000538375 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
COPS7A-207ENST00000538375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-207ENST00000538375 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
COPS7A-207ENST00000538375 ABCA8O94911 1581 aa21.33■■□□□ 1.01
COPS7A-207ENST00000538375 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1.01
COPS7A-207ENST00000538375 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
COPS7A-207ENST00000538375 ASXL2Q76L83 1435 aa21.29■■□□□ 1
COPS7A-207ENST00000538375 ARHGAP35Q9NRY4 1499 aa21.29■■□□□ 1
COPS7A-207ENST00000538375 ZCCHC11Q5TAX3 1644 aaKnown RBP21.27■■□□□ 1
COPS7A-207ENST00000538375 KCNH8Q96L42 1107 aa21.27■■□□□ 1
COPS7A-207ENST00000538375 RAPGEF6Q8TEU7 1601 aa21.25■□□□□ 0.99
COPS7A-207ENST00000538375 CLIP1P30622 1438 aa21.22■□□□□ 0.99
COPS7A-207ENST00000538375 ATP10BO94823 1461 aa21.22■□□□□ 0.99
COPS7A-207ENST00000538375 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
COPS7A-207ENST00000538375 KDM4FA0A1W2PPD8 638 aa21.19■□□□□ 0.98
COPS7A-207ENST00000538375 NUP153P49790 1475 aaKnown RBP21.18■□□□□ 0.98
COPS7A-207ENST00000538375 KDM6BO15054 1643 aa21.18■□□□□ 0.98
COPS7A-207ENST00000538375 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
COPS7A-207ENST00000538375 PLEKHD1A6NEE1 506 aa21.16■□□□□ 0.98
COPS7A-207ENST00000538375 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
COPS7A-207ENST00000538375 GLI2P10070 1586 aa21.14■□□□□ 0.97
COPS7A-207ENST00000538375 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
COPS7A-207ENST00000538375 TSPOAP1O95153 1857 aa21.1■□□□□ 0.97
COPS7A-207ENST00000538375 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
COPS7A-207ENST00000538375 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
COPS7A-207ENST00000538375 PPRC1Q5VV67 1664 aaKnown RBP21.06■□□□□ 0.96
COPS7A-207ENST00000538375 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
COPS7A-207ENST00000538375 COL17A1Q9UMD9 1497 aaPredicted RBP21.04■□□□□ 0.96
COPS7A-207ENST00000538375 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
COPS7A-207ENST00000538375 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
COPS7A-207ENST00000538375 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
COPS7A-207ENST00000538375 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
COPS7A-207ENST00000538375 TEX14Q8IWB6 1497 aa20.96■□□□□ 0.95
COPS7A-207ENST00000538375 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
COPS7A-207ENST00000538375 CFAP43Q8NDM7 1665 aa20.94■□□□□ 0.94
COPS7A-207ENST00000538375 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
COPS7A-207ENST00000538375 ABCA9Q8IUA7 1624 aa20.91■□□□□ 0.94
COPS7A-207ENST00000538375 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
COPS7A-207ENST00000538375 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
COPS7A-207ENST00000538375 TROQ12816 1431 aaPredicted RBP20.89■□□□□ 0.94
COPS7A-207ENST00000538375 ADGRL1O94910 1474 aa20.88■□□□□ 0.93
COPS7A-207ENST00000538375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.87■□□□□ 0.93
COPS7A-207ENST00000538375 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
COPS7A-207ENST00000538375 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
COPS7A-207ENST00000538375 TTC37Q6PGP7 1564 aa20.81■□□□□ 0.92
COPS7A-207ENST00000538375 KIF14Q15058 1648 aa20.81■□□□□ 0.92
COPS7A-207ENST00000538375 APLP2Q06481 763 aa20.8■□□□□ 0.92
COPS7A-207ENST00000538375 EFCAB2Q5VUJ9 269 aa20.79■□□□□ 0.92
COPS7A-207ENST00000538375 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
COPS7A-207ENST00000538375 PLCH2O75038 1416 aa20.78■□□□□ 0.92
COPS7A-207ENST00000538375 FANCAO15360 1455 aa20.77■□□□□ 0.92
COPS7A-207ENST00000538375 NEO1Q92859 1461 aa20.76■□□□□ 0.91
COPS7A-207ENST00000538375 RAPGEF3O95398 923 aa20.76■□□□□ 0.91
COPS7A-207ENST00000538375 AKNAQ7Z591 1439 aa20.75■□□□□ 0.91
COPS7A-207ENST00000538375 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
COPS7A-207ENST00000538375 ARAP3Q8WWN8 1544 aa20.73■□□□□ 0.91
COPS7A-207ENST00000538375 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
COPS7A-207ENST00000538375 ARHGAP5Q13017 1502 aa20.72■□□□□ 0.91
COPS7A-207ENST00000538375 CCNB3Q8WWL7 1395 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms