RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
PRKAB1-204ENST00000538271 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
PRKAB1-204ENST00000538271 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
PRKAB1-204ENST00000538271 SOGA1O94964 1423 aa18.88■□□□□ 0.61
PRKAB1-204ENST00000538271 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
PRKAB1-204ENST00000538271 DIP2BQ9P265 1576 aa18.84■□□□□ 0.61
PRKAB1-204ENST00000538271 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
PRKAB1-204ENST00000538271 TSPOAP1O95153 1857 aa18.8■□□□□ 0.6
PRKAB1-204ENST00000538271 MAPKBP1O60336 1514 aa18.75■□□□□ 0.59
PRKAB1-204ENST00000538271 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
PRKAB1-204ENST00000538271 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
PRKAB1-204ENST00000538271 PBRM1Q86U86 1689 aa18.71■□□□□ 0.59
PRKAB1-204ENST00000538271 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
PRKAB1-204ENST00000538271 NPM1P06748 294 aaKnown RBP eCLIP18.68■□□□□ 0.58
PRKAB1-204ENST00000538271 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
PRKAB1-204ENST00000538271 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
PRKAB1-204ENST00000538271 NUP160Q12769 1436 aa18.63■□□□□ 0.57
PRKAB1-204ENST00000538271 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
PRKAB1-204ENST00000538271 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
PRKAB1-204ENST00000538271 PRG4Q92954 1404 aaPredicted RBP18.55■□□□□ 0.56
PRKAB1-204ENST00000538271 ADCY10Q96PN6 1610 aa18.54■□□□□ 0.56
PRKAB1-204ENST00000538271 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
PRKAB1-204ENST00000538271 PPRC1Q5VV67 1664 aaKnown RBP18.5■□□□□ 0.55
PRKAB1-204ENST00000538271 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
PRKAB1-204ENST00000538271 COL17A1Q9UMD9 1497 aaPredicted RBP18.49■□□□□ 0.55
PRKAB1-204ENST00000538271 CUX1P39880 1505 aa18.46■□□□□ 0.55
PRKAB1-204ENST00000538271 SPATA31D1Q6ZQQ2 1576 aa18.45■□□□□ 0.54
PRKAB1-204ENST00000538271 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
PRKAB1-204ENST00000538271 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
PRKAB1-204ENST00000538271 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
PRKAB1-204ENST00000538271 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
PRKAB1-204ENST00000538271 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
PRKAB1-204ENST00000538271 GLI2P10070 1586 aa18.35■□□□□ 0.53
PRKAB1-204ENST00000538271 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.53
PRKAB1-204ENST00000538271 KCNA4P22459 653 aa18.33■□□□□ 0.52
PRKAB1-204ENST00000538271 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
PRKAB1-204ENST00000538271 PCF11O94913 1555 aaKnown RBP18.27■□□□□ 0.52
PRKAB1-204ENST00000538271 ASXL2Q76L83 1435 aa18.24■□□□□ 0.51
PRKAB1-204ENST00000538271 PTPRMP28827 1452 aa18.24■□□□□ 0.51
PRKAB1-204ENST00000538271 PLB1Q6P1J6 1458 aa18.24■□□□□ 0.51
PRKAB1-204ENST00000538271 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
PRKAB1-204ENST00000538271 RUSC2Q8N2Y8 1516 aa18.22■□□□□ 0.51
PRKAB1-204ENST00000538271 MAP3K4Q9Y6R4 1608 aa18.21■□□□□ 0.51
PRKAB1-204ENST00000538271 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
PRKAB1-204ENST00000538271 KIF21BO75037 1637 aa18.2■□□□□ 0.5
PRKAB1-204ENST00000538271 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
PRKAB1-204ENST00000538271 RNF39Q9H2S5 420 aa18.15■□□□□ 0.5
PRKAB1-204ENST00000538271 ADAMTSL3P82987 1691 aa18.14■□□□□ 0.49
PRKAB1-204ENST00000538271 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
PRKAB1-204ENST00000538271 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
PRKAB1-204ENST00000538271 HSPA2P54652 639 aa18.1■□□□□ 0.49
PRKAB1-204ENST00000538271 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
PRKAB1-204ENST00000538271 CUL7Q14999 1698 aa18.09■□□□□ 0.49
PRKAB1-204ENST00000538271 PTPRGP23470 1445 aa18.08■□□□□ 0.49
PRKAB1-204ENST00000538271 KIAA0586Q9BVV6 1533 aa18.08■□□□□ 0.48
PRKAB1-204ENST00000538271 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
PRKAB1-204ENST00000538271 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
PRKAB1-204ENST00000538271 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
PRKAB1-204ENST00000538271 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
PRKAB1-204ENST00000538271 MADDQ8WXG6 1647 aa17.98■□□□□ 0.47
PRKAB1-204ENST00000538271 BCORL1Q5H9F3 1711 aa17.95■□□□□ 0.46
PRKAB1-204ENST00000538271 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
PRKAB1-204ENST00000538271 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
PRKAB1-204ENST00000538271 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
PRKAB1-204ENST00000538271 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
PRKAB1-204ENST00000538271 UACAQ9BZF9 1416 aa17.9■□□□□ 0.46
PRKAB1-204ENST00000538271 RIMS1Q86UR5 1692 aaKnown RBP17.88■□□□□ 0.45
PRKAB1-204ENST00000538271 CD109Q6YHK3 1445 aa17.88■□□□□ 0.45
PRKAB1-204ENST00000538271 ZCCHC11Q5TAX3 1644 aaKnown RBP17.87■□□□□ 0.45
PRKAB1-204ENST00000538271 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
PRKAB1-204ENST00000538271 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
PRKAB1-204ENST00000538271 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.45
PRKAB1-204ENST00000538271 ARAP3Q8WWN8 1544 aa17.82■□□□□ 0.44
PRKAB1-204ENST00000538271 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
PRKAB1-204ENST00000538271 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
PRKAB1-204ENST00000538271 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
PRKAB1-204ENST00000538271 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
PRKAB1-204ENST00000538271 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
PRKAB1-204ENST00000538271 KCNH8Q96L42 1107 aa17.72■□□□□ 0.43
PRKAB1-204ENST00000538271 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.43
PRKAB1-204ENST00000538271 LTBP4Q8N2S1 1624 aa17.7■□□□□ 0.42
PRKAB1-204ENST00000538271 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
PRKAB1-204ENST00000538271 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
PRKAB1-204ENST00000538271 PREX1Q8TCU6 1659 aa17.65■□□□□ 0.42
PRKAB1-204ENST00000538271 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
PRKAB1-204ENST00000538271 PTPRTO14522 1441 aa17.64■□□□□ 0.41
PRKAB1-204ENST00000538271 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
PRKAB1-204ENST00000538271 FRMPD1Q5SYB0 1578 aa17.61■□□□□ 0.41
PRKAB1-204ENST00000538271 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
PRKAB1-204ENST00000538271 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
PRKAB1-204ENST00000538271 IGF1RP08069 1367 aa17.59■□□□□ 0.41
PRKAB1-204ENST00000538271 TTC37Q6PGP7 1564 aa17.58■□□□□ 0.41
PRKAB1-204ENST00000538271 ARHGEF40Q8TER5 1519 aa17.58■□□□□ 0.41
PRKAB1-204ENST00000538271 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
PRKAB1-204ENST00000538271 FER1L4A9Z1Z3 1794 aa17.56■□□□□ 0.4
PRKAB1-204ENST00000538271 FANCAO15360 1455 aa17.53■□□□□ 0.4
PRKAB1-204ENST00000538271 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
PRKAB1-204ENST00000538271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKAB1-204ENST00000538271 SIGLEC1Q9BZZ2 1709 aa17.51■□□□□ 0.39
PRKAB1-204ENST00000538271 NEO1Q92859 1461 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms