RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 SHROOM2Q13796 1616 aa17.81■□□□□ 0.44
TCF4-206ENST00000537856 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
TCF4-206ENST00000537856 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
TCF4-206ENST00000537856 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
TCF4-206ENST00000537856 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
TCF4-206ENST00000537856 EEA1Q15075 1411 aa17.73■□□□□ 0.43
TCF4-206ENST00000537856 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
TCF4-206ENST00000537856 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
TCF4-206ENST00000537856 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
TCF4-206ENST00000537856 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
TCF4-206ENST00000537856 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
TCF4-206ENST00000537856 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
TCF4-206ENST00000537856 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
TCF4-206ENST00000537856 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
TCF4-206ENST00000537856 PTPRGP23470 1445 aa17.62■□□□□ 0.41
TCF4-206ENST00000537856 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
TCF4-206ENST00000537856 UGGT2Q9NYU1 1516 aa17.57■□□□□ 0.4
TCF4-206ENST00000537856 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
TCF4-206ENST00000537856 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
TCF4-206ENST00000537856 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
TCF4-206ENST00000537856 DISP1Q96F81 1524 aa17.49■□□□□ 0.39
TCF4-206ENST00000537856 UACAQ9BZF9 1416 aa17.48■□□□□ 0.39
TCF4-206ENST00000537856 UHRF1BP1LA0JNW5 1464 aa17.47■□□□□ 0.39
TCF4-206ENST00000537856 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
TCF4-206ENST00000537856 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
TCF4-206ENST00000537856 ADCY10Q96PN6 1610 aa17.44■□□□□ 0.38
TCF4-206ENST00000537856 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
TCF4-206ENST00000537856 KIF21BO75037 1637 aa17.41■□□□□ 0.38
TCF4-206ENST00000537856 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
TCF4-206ENST00000537856 ABCC10Q5T3U5 1492 aa17.4■□□□□ 0.38
TCF4-206ENST00000537856 PLB1Q6P1J6 1458 aa17.4■□□□□ 0.38
TCF4-206ENST00000537856 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
TCF4-206ENST00000537856 KDM5BQ9UGL1 1544 aa17.35■□□□□ 0.37
TCF4-206ENST00000537856 ASXL2Q76L83 1435 aa17.32■□□□□ 0.36
TCF4-206ENST00000537856 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
TCF4-206ENST00000537856 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
TCF4-206ENST00000537856 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
TCF4-206ENST00000537856 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
TCF4-206ENST00000537856 ABCA8O94911 1581 aa17.28■□□□□ 0.36
TCF4-206ENST00000537856 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
TCF4-206ENST00000537856 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
TCF4-206ENST00000537856 GLI2P10070 1586 aa17.26■□□□□ 0.35
TCF4-206ENST00000537856 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
TCF4-206ENST00000537856 WDR7Q9Y4E6 1490 aa17.23■□□□□ 0.35
TCF4-206ENST00000537856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
TCF4-206ENST00000537856 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
TCF4-206ENST00000537856 EPRSP07814 1512 aaKnown RBP17.21■□□□□ 0.35
TCF4-206ENST00000537856 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
TCF4-206ENST00000537856 RAPGEF6Q8TEU7 1601 aa17.19■□□□□ 0.34
TCF4-206ENST00000537856 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
TCF4-206ENST00000537856 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
TCF4-206ENST00000537856 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
TCF4-206ENST00000537856 KCNH8Q96L42 1107 aa17.16■□□□□ 0.34
TCF4-206ENST00000537856 ATP10BO94823 1461 aa17.15■□□□□ 0.34
TCF4-206ENST00000537856 PLEKHD1A6NEE1 506 aa17.15■□□□□ 0.34
TCF4-206ENST00000537856 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
TCF4-206ENST00000537856 CD109Q6YHK3 1445 aa17.11■□□□□ 0.33
TCF4-206ENST00000537856 KDM6BO15054 1643 aa17.11■□□□□ 0.33
TCF4-206ENST00000537856 TSPOAP1O95153 1857 aa17.11■□□□□ 0.33
TCF4-206ENST00000537856 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
TCF4-206ENST00000537856 CFAP43Q8NDM7 1665 aa17.1■□□□□ 0.33
TCF4-206ENST00000537856 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
TCF4-206ENST00000537856 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
TCF4-206ENST00000537856 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
TCF4-206ENST00000537856 MAGI3Q5TCQ9 1506 aa17.08■□□□□ 0.33
TCF4-206ENST00000537856 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.33
TCF4-206ENST00000537856 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.33
TCF4-206ENST00000537856 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
TCF4-206ENST00000537856 CLIP1P30622 1438 aa17.02■□□□□ 0.31
TCF4-206ENST00000537856 PPRC1Q5VV67 1664 aaKnown RBP17■□□□□ 0.31
TCF4-206ENST00000537856 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
TCF4-206ENST00000537856 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
TCF4-206ENST00000537856 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
TCF4-206ENST00000537856 NEO1Q92859 1461 aa16.96■□□□□ 0.31
TCF4-206ENST00000537856 ARAP3Q8WWN8 1544 aa16.93■□□□□ 0.3
TCF4-206ENST00000537856 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
TCF4-206ENST00000537856 CFAP74Q9C0B2 1584 aa16.92■□□□□ 0.3
TCF4-206ENST00000537856 CDK13Q14004 1512 aaKnown RBP16.92■□□□□ 0.3
TCF4-206ENST00000537856 TROQ12816 1431 aaPredicted RBP16.91■□□□□ 0.3
TCF4-206ENST00000537856 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
TCF4-206ENST00000537856 KIF14Q15058 1648 aa16.87■□□□□ 0.29
TCF4-206ENST00000537856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
TCF4-206ENST00000537856 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
TCF4-206ENST00000537856 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
TCF4-206ENST00000537856 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
TCF4-206ENST00000537856 PLCH2O75038 1416 aa16.86■□□□□ 0.29
TCF4-206ENST00000537856 FANCAO15360 1455 aa16.86■□□□□ 0.29
TCF4-206ENST00000537856 AKNAQ7Z591 1439 aa16.85■□□□□ 0.29
TCF4-206ENST00000537856 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
TCF4-206ENST00000537856 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
TCF4-206ENST00000537856 TTC37Q6PGP7 1564 aa16.8■□□□□ 0.28
TCF4-206ENST00000537856 MYO5CQ9NQX4 1742 aa16.79■□□□□ 0.28
TCF4-206ENST00000537856 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
TCF4-206ENST00000537856 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
TCF4-206ENST00000537856 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
TCF4-206ENST00000537856 ADGRL1O94910 1474 aa16.77■□□□□ 0.27
TCF4-206ENST00000537856 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
TCF4-206ENST00000537856 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
TCF4-206ENST00000537856 SCAPERQ9BY12 1400 aa16.75■□□□□ 0.27
TCF4-206ENST00000537856 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms