RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 KIAA0586Q9BVV6 1533 aa29.29■■■□□ 2.28
GPN3-202ENST00000537466 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
GPN3-202ENST00000537466 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
GPN3-202ENST00000537466 PRG4Q92954 1404 aaPredicted RBP29.25■■■□□ 2.27
GPN3-202ENST00000537466 CHIC1Q5VXU3 224 aa29.17■■■□□ 2.26
GPN3-202ENST00000537466 IQGAP2Q13576 1575 aa29.16■■■□□ 2.26
GPN3-202ENST00000537466 PRXQ9BXM0 1461 aa29.15■■■□□ 2.26
GPN3-202ENST00000537466 CTTNBP2Q8WZ74 1663 aa29.12■■■□□ 2.25
GPN3-202ENST00000537466 EEA1Q15075 1411 aa29.06■■■□□ 2.24
GPN3-202ENST00000537466 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
GPN3-202ENST00000537466 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
GPN3-202ENST00000537466 UGGT2Q9NYU1 1516 aa28.97■■■□□ 2.23
GPN3-202ENST00000537466 DISP1Q96F81 1524 aa28.96■■■□□ 2.23
GPN3-202ENST00000537466 CARMIL2Q6F5E8 1435 aa28.95■■■□□ 2.22
GPN3-202ENST00000537466 KIAA0556O60303 1618 aa28.9■■■□□ 2.22
GPN3-202ENST00000537466 ADCY10Q96PN6 1610 aa28.9■■■□□ 2.22
GPN3-202ENST00000537466 TNIKQ9UKE5 1360 aa28.87■■■□□ 2.21
GPN3-202ENST00000537466 PTPRGP23470 1445 aa28.86■■■□□ 2.21
GPN3-202ENST00000537466 TRHP20396 242 aaPredicted RBP28.86■■■□□ 2.21
GPN3-202ENST00000537466 KIF21BO75037 1637 aa28.86■■■□□ 2.21
GPN3-202ENST00000537466 TTBK1Q5TCY1 1321 aaPredicted RBP28.85■■■□□ 2.21
GPN3-202ENST00000537466 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
GPN3-202ENST00000537466 KIF13AQ9H1H9 1805 aa28.69■■■□□ 2.18
GPN3-202ENST00000537466 UACAQ9BZF9 1416 aa28.69■■■□□ 2.18
GPN3-202ENST00000537466 NPM1P06748 294 aaKnown RBP eCLIP28.68■■■□□ 2.18
GPN3-202ENST00000537466 MAPKBP1O60336 1514 aa28.68■■■□□ 2.18
GPN3-202ENST00000537466 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
GPN3-202ENST00000537466 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
GPN3-202ENST00000537466 ABCC2Q92887 1545 aa28.66■■■□□ 2.18
GPN3-202ENST00000537466 EHMT2Q96KQ7 1210 aa28.65■■■□□ 2.18
GPN3-202ENST00000537466 P3H3Q8IVL6 736 aa28.6■■■□□ 2.17
GPN3-202ENST00000537466 PLB1Q6P1J6 1458 aa28.6■■■□□ 2.17
GPN3-202ENST00000537466 ABCA8O94911 1581 aa28.58■■■□□ 2.17
GPN3-202ENST00000537466 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
GPN3-202ENST00000537466 ZCCHC11Q5TAX3 1644 aaKnown RBP28.57■■■□□ 2.16
GPN3-202ENST00000537466 DIP2BQ9P265 1576 aa28.56■■■□□ 2.16
GPN3-202ENST00000537466 KDM5BQ9UGL1 1544 aa28.55■■■□□ 2.16
GPN3-202ENST00000537466 ABCC10Q5T3U5 1492 aa28.54■■■□□ 2.16
GPN3-202ENST00000537466 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
GPN3-202ENST00000537466 EFCAB5A4FU69 1503 aa28.48■■■□□ 2.15
GPN3-202ENST00000537466 ASXL2Q76L83 1435 aa28.48■■■□□ 2.15
GPN3-202ENST00000537466 FHOD3Q2V2M9 1422 aa28.47■■■□□ 2.15
GPN3-202ENST00000537466 FAM69CQ0P6D2 419 aa28.46■■■□□ 2.15
GPN3-202ENST00000537466 RAPGEF6Q8TEU7 1601 aa28.42■■■□□ 2.14
GPN3-202ENST00000537466 TSPOAP1O95153 1857 aa28.4■■■□□ 2.14
GPN3-202ENST00000537466 ARHGAP35Q9NRY4 1499 aa28.35■■■□□ 2.13
GPN3-202ENST00000537466 GLI2P10070 1586 aa28.34■■■□□ 2.13
GPN3-202ENST00000537466 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
GPN3-202ENST00000537466 WDR7Q9Y4E6 1490 aa28.32■■■□□ 2.12
GPN3-202ENST00000537466 ARID3CA6NKF2 412 aa28.32■■■□□ 2.12
GPN3-202ENST00000537466 ATP10BO94823 1461 aa28.31■■■□□ 2.12
GPN3-202ENST00000537466 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
GPN3-202ENST00000537466 PPRC1Q5VV67 1664 aaKnown RBP28.27■■■□□ 2.12
GPN3-202ENST00000537466 MAP3K4Q9Y6R4 1608 aa28.26■■■□□ 2.11
GPN3-202ENST00000537466 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
GPN3-202ENST00000537466 KCNH8Q96L42 1107 aa28.17■■■□□ 2.1
GPN3-202ENST00000537466 CFAP43Q8NDM7 1665 aa28.16■■■□□ 2.1
GPN3-202ENST00000537466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.09
GPN3-202ENST00000537466 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.09
GPN3-202ENST00000537466 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
GPN3-202ENST00000537466 KDM6BO15054 1643 aa28.11■■■□□ 2.09
GPN3-202ENST00000537466 CLIP1P30622 1438 aa28.11■■■□□ 2.09
GPN3-202ENST00000537466 CDK13Q14004 1512 aaKnown RBP28.11■■■□□ 2.09
GPN3-202ENST00000537466 LRRIQ1Q96JM4 1722 aa28.11■■■□□ 2.09
GPN3-202ENST00000537466 ABCA9Q8IUA7 1624 aa28.07■■■□□ 2.08
GPN3-202ENST00000537466 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
GPN3-202ENST00000537466 CD109Q6YHK3 1445 aa28.05■■■□□ 2.08
GPN3-202ENST00000537466 TEX14Q8IWB6 1497 aa28.04■■■□□ 2.08
GPN3-202ENST00000537466 ATP1B4Q9UN42 357 aaPredicted RBP28.04■■■□□ 2.08
GPN3-202ENST00000537466 MAGI3Q5TCQ9 1506 aa28.01■■■□□ 2.07
GPN3-202ENST00000537466 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
GPN3-202ENST00000537466 PLEKHD1A6NEE1 506 aa28■■■□□ 2.07
GPN3-202ENST00000537466 CEP162Q5TB80 1403 aa27.97■■■□□ 2.07
GPN3-202ENST00000537466 CASKIN1Q8WXD9 1431 aa27.97■■■□□ 2.07
GPN3-202ENST00000537466 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.06
GPN3-202ENST00000537466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.92■■■□□ 2.06
GPN3-202ENST00000537466 FYCO1Q9BQS8 1478 aa27.92■■■□□ 2.06
GPN3-202ENST00000537466 TTC37Q6PGP7 1564 aa27.91■■■□□ 2.06
GPN3-202ENST00000537466 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
GPN3-202ENST00000537466 KIF14Q15058 1648 aa27.85■■■□□ 2.05
GPN3-202ENST00000537466 CDK11AQ9UQ88 783 aaPredicted RBP27.83■■■□□ 2.05
GPN3-202ENST00000537466 TROQ12816 1431 aaPredicted RBP27.82■■■□□ 2.04
GPN3-202ENST00000537466 NEO1Q92859 1461 aa27.78■■■□□ 2.04
GPN3-202ENST00000537466 ARAP3Q8WWN8 1544 aa27.78■■■□□ 2.04
GPN3-202ENST00000537466 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
GPN3-202ENST00000537466 CFAP74Q9C0B2 1584 aa27.74■■■□□ 2.03
GPN3-202ENST00000537466 PHLDB1Q86UU1 1377 aa27.73■■■□□ 2.03
GPN3-202ENST00000537466 FANCAO15360 1455 aa27.72■■■□□ 2.03
GPN3-202ENST00000537466 PLCH2O75038 1416 aa27.7■■■□□ 2.02
GPN3-202ENST00000537466 AKNAQ7Z591 1439 aa27.67■■■□□ 2.02
GPN3-202ENST00000537466 FRMPD1Q5SYB0 1578 aa27.67■■■□□ 2.02
GPN3-202ENST00000537466 CDC42BPBQ9Y5S2 1711 aa27.66■■■□□ 2.02
GPN3-202ENST00000537466 RICTORQ6R327 1708 aa27.65■■■□□ 2.02
GPN3-202ENST00000537466 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
GPN3-202ENST00000537466 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
GPN3-202ENST00000537466 RAPGEF3O95398 923 aa27.63■■■□□ 2.01
GPN3-202ENST00000537466 PREX2Q70Z35 1606 aa27.62■■■□□ 2.01
GPN3-202ENST00000537466 ARHGAP5Q13017 1502 aa27.6■■■□□ 2.01
GPN3-202ENST00000537466 DENND4BO75064 1496 aaPredicted RBP27.58■■■□□ 2.01
GPN3-202ENST00000537466 ADGRL1O94910 1474 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms