RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 NUP160Q12769 1436 aa18.6■□□□□ 0.57
LDHA-215ENST00000537296 ARAP1Q96P48 1450 aa18.58■□□□□ 0.57
LDHA-215ENST00000537296 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
LDHA-215ENST00000537296 CUL7Q14999 1698 aa18.56■□□□□ 0.56
LDHA-215ENST00000537296 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
LDHA-215ENST00000537296 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
LDHA-215ENST00000537296 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
LDHA-215ENST00000537296 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
LDHA-215ENST00000537296 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
LDHA-215ENST00000537296 JPH4Q96JJ6 628 aa18.39■□□□□ 0.54
LDHA-215ENST00000537296 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
LDHA-215ENST00000537296 KIAA0586Q9BVV6 1533 aa18.38■□□□□ 0.53
LDHA-215ENST00000537296 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
LDHA-215ENST00000537296 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
LDHA-215ENST00000537296 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
LDHA-215ENST00000537296 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
LDHA-215ENST00000537296 FAM9AQ8IZU1 332 aaPredicted RBP18.23■□□□□ 0.51
LDHA-215ENST00000537296 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
LDHA-215ENST00000537296 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
LDHA-215ENST00000537296 EEA1Q15075 1411 aa18.19■□□□□ 0.5
LDHA-215ENST00000537296 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
LDHA-215ENST00000537296 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
LDHA-215ENST00000537296 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
LDHA-215ENST00000537296 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
LDHA-215ENST00000537296 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
LDHA-215ENST00000537296 KIAA0556O60303 1618 aa18.14■□□□□ 0.5
LDHA-215ENST00000537296 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
LDHA-215ENST00000537296 PTPRGP23470 1445 aa18.13■□□□□ 0.49
LDHA-215ENST00000537296 KIF21BO75037 1637 aa18.09■□□□□ 0.49
LDHA-215ENST00000537296 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
LDHA-215ENST00000537296 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
LDHA-215ENST00000537296 GOLGA3Q08378 1498 aa18.02■□□□□ 0.48
LDHA-215ENST00000537296 MSH5O43196 834 aa18.02■□□□□ 0.47
LDHA-215ENST00000537296 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
LDHA-215ENST00000537296 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
LDHA-215ENST00000537296 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
LDHA-215ENST00000537296 P3H3Q8IVL6 736 aa18■□□□□ 0.47
LDHA-215ENST00000537296 ABCC2Q92887 1545 aa18■□□□□ 0.47
LDHA-215ENST00000537296 SAMD9Q5K651 1589 aa18■□□□□ 0.47
LDHA-215ENST00000537296 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
LDHA-215ENST00000537296 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
LDHA-215ENST00000537296 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
LDHA-215ENST00000537296 ABCA8O94911 1581 aa17.95■□□□□ 0.46
LDHA-215ENST00000537296 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
LDHA-215ENST00000537296 ZCCHC11Q5TAX3 1644 aaKnown RBP17.95■□□□□ 0.46
LDHA-215ENST00000537296 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
LDHA-215ENST00000537296 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
LDHA-215ENST00000537296 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
LDHA-215ENST00000537296 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
LDHA-215ENST00000537296 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
LDHA-215ENST00000537296 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.46
LDHA-215ENST00000537296 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
LDHA-215ENST00000537296 ARID3CA6NKF2 412 aa17.85■□□□□ 0.45
LDHA-215ENST00000537296 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
LDHA-215ENST00000537296 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
LDHA-215ENST00000537296 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
LDHA-215ENST00000537296 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
LDHA-215ENST00000537296 GLI2P10070 1586 aa17.79■□□□□ 0.44
LDHA-215ENST00000537296 ATP10BO94823 1461 aa17.79■□□□□ 0.44
LDHA-215ENST00000537296 PPRC1Q5VV67 1664 aaKnown RBP17.79■□□□□ 0.44
LDHA-215ENST00000537296 WDR7Q9Y4E6 1490 aa17.79■□□□□ 0.44
LDHA-215ENST00000537296 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
LDHA-215ENST00000537296 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
LDHA-215ENST00000537296 KCNH8Q96L42 1107 aa17.72■□□□□ 0.43
LDHA-215ENST00000537296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
LDHA-215ENST00000537296 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
LDHA-215ENST00000537296 KDM6BO15054 1643 aa17.67■□□□□ 0.42
LDHA-215ENST00000537296 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
LDHA-215ENST00000537296 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
LDHA-215ENST00000537296 CFAP43Q8NDM7 1665 aa17.66■□□□□ 0.42
LDHA-215ENST00000537296 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
LDHA-215ENST00000537296 HECW1Q76N89 1606 aa17.63■□□□□ 0.41
LDHA-215ENST00000537296 CLIP1P30622 1438 aa17.63■□□□□ 0.41
LDHA-215ENST00000537296 CD109Q6YHK3 1445 aa17.62■□□□□ 0.41
LDHA-215ENST00000537296 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
LDHA-215ENST00000537296 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
LDHA-215ENST00000537296 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
LDHA-215ENST00000537296 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
LDHA-215ENST00000537296 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
LDHA-215ENST00000537296 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
LDHA-215ENST00000537296 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
LDHA-215ENST00000537296 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
LDHA-215ENST00000537296 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
LDHA-215ENST00000537296 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
LDHA-215ENST00000537296 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
LDHA-215ENST00000537296 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
LDHA-215ENST00000537296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.49e-20■□□□□ 9.6
LDHA-215ENST00000537296 KIF14Q15058 1648 aa17.51■□□□□ 0.39
LDHA-215ENST00000537296 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
LDHA-215ENST00000537296 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
LDHA-215ENST00000537296 TROQ12816 1431 aaPredicted RBP17.46■□□□□ 0.39
LDHA-215ENST00000537296 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
LDHA-215ENST00000537296 NEO1Q92859 1461 aa17.42■□□□□ 0.38
LDHA-215ENST00000537296 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
LDHA-215ENST00000537296 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
LDHA-215ENST00000537296 FANCAO15360 1455 aa17.41■□□□□ 0.38
LDHA-215ENST00000537296 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
LDHA-215ENST00000537296 RAPGEF3O95398 923 aa17.39■□□□□ 0.37
LDHA-215ENST00000537296 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
LDHA-215ENST00000537296 PLCH2O75038 1416 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms