RNA–Protein interactions for RNA: ENST00000536936.1

FERMT1-204, Transcript of fermitin family member 1, humanhuman

TSL 1 (best) BASIC

Gene FERMT1, Length 3,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT1-204ENST00000536936 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
FERMT1-204ENST00000536936 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
FERMT1-204ENST00000536936 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
FERMT1-204ENST00000536936 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
FERMT1-204ENST00000536936 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
FERMT1-204ENST00000536936 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
FERMT1-204ENST00000536936 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
FERMT1-204ENST00000536936 PCF11O94913 1555 aaKnown RBP18.6■□□□□ 0.57
FERMT1-204ENST00000536936 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
FERMT1-204ENST00000536936 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
FERMT1-204ENST00000536936 WDR97A6NE52 1622 aa18.58■□□□□ 0.57
FERMT1-204ENST00000536936 CUL7Q14999 1698 aa18.58■□□□□ 0.56
FERMT1-204ENST00000536936 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
FERMT1-204ENST00000536936 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
FERMT1-204ENST00000536936 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
FERMT1-204ENST00000536936 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
FERMT1-204ENST00000536936 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
FERMT1-204ENST00000536936 CTTNBP2Q8WZ74 1663 aa18.52■□□□□ 0.56
FERMT1-204ENST00000536936 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
FERMT1-204ENST00000536936 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
FERMT1-204ENST00000536936 LRRC9Q6ZRR7 1453 aa18.51■□□□□ 0.55
FERMT1-204ENST00000536936 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
FERMT1-204ENST00000536936 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
FERMT1-204ENST00000536936 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
FERMT1-204ENST00000536936 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
FERMT1-204ENST00000536936 FMN1Q68DA7 1419 aa18.44■□□□□ 0.54
FERMT1-204ENST00000536936 WDR62O43379 1518 aa18.44■□□□□ 0.54
FERMT1-204ENST00000536936 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
FERMT1-204ENST00000536936 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
FERMT1-204ENST00000536936 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
FERMT1-204ENST00000536936 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
FERMT1-204ENST00000536936 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
FERMT1-204ENST00000536936 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
FERMT1-204ENST00000536936 RAB3GAP2Q9H2M9 1393 aa18.38■□□□□ 0.53
FERMT1-204ENST00000536936 FYCO1Q9BQS8 1478 aa18.38■□□□□ 0.53
FERMT1-204ENST00000536936 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
FERMT1-204ENST00000536936 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
FERMT1-204ENST00000536936 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
FERMT1-204ENST00000536936 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
FERMT1-204ENST00000536936 SIN3AQ96ST3 1273 aa18.36■□□□□ 0.53
FERMT1-204ENST00000536936 ZNF777Q9ULD5 760 aaPredicted RBP18.36■□□□□ 0.53
FERMT1-204ENST00000536936 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
FERMT1-204ENST00000536936 GRIN2AQ12879 1464 aa18.33■□□□□ 0.52
FERMT1-204ENST00000536936 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
FERMT1-204ENST00000536936 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
FERMT1-204ENST00000536936 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
FERMT1-204ENST00000536936 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
FERMT1-204ENST00000536936 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
FERMT1-204ENST00000536936 SAMD9Q5K651 1589 aa18.29■□□□□ 0.52
FERMT1-204ENST00000536936 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
FERMT1-204ENST00000536936 NCOA2Q15596 1464 aa18.28■□□□□ 0.52
FERMT1-204ENST00000536936 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
FERMT1-204ENST00000536936 TRIM52Q96A61 297 aa18.27■□□□□ 0.51
FERMT1-204ENST00000536936 ZNF644Q9H582 1327 aaPredicted RBP18.26■□□□□ 0.51
FERMT1-204ENST00000536936 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
FERMT1-204ENST00000536936 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
FERMT1-204ENST00000536936 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
FERMT1-204ENST00000536936 SETD5Q9C0A6 1442 aa18.25■□□□□ 0.51
FERMT1-204ENST00000536936 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
FERMT1-204ENST00000536936 PLB1Q6P1J6 1458 aa18.23■□□□□ 0.51
FERMT1-204ENST00000536936 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
FERMT1-204ENST00000536936 EPRSP07814 1512 aaKnown RBP18.21■□□□□ 0.51
FERMT1-204ENST00000536936 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
FERMT1-204ENST00000536936 MAP3K1Q13233 1512 aa18.21■□□□□ 0.51
FERMT1-204ENST00000536936 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
FERMT1-204ENST00000536936 PTPRKQ15262 1439 aa18.19■□□□□ 0.5
FERMT1-204ENST00000536936 FOXD1Q16676 465 aa18.18■□□□□ 0.5
FERMT1-204ENST00000536936 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
FERMT1-204ENST00000536936 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
FERMT1-204ENST00000536936 MYOM3Q5VTT5 1437 aa18.17■□□□□ 0.5
FERMT1-204ENST00000536936 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
FERMT1-204ENST00000536936 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
FERMT1-204ENST00000536936 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
FERMT1-204ENST00000536936 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
FERMT1-204ENST00000536936 MIER1Q8N108 512 aa18.12■□□□□ 0.49
FERMT1-204ENST00000536936 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
FERMT1-204ENST00000536936 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
FERMT1-204ENST00000536936 UGGT2Q9NYU1 1516 aa18.12■□□□□ 0.49
FERMT1-204ENST00000536936 NUP153P49790 1475 aaKnown RBP18.11■□□□□ 0.49
FERMT1-204ENST00000536936 CARMIL2Q6F5E8 1435 aa18.11■□□□□ 0.49
FERMT1-204ENST00000536936 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
FERMT1-204ENST00000536936 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
FERMT1-204ENST00000536936 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
FERMT1-204ENST00000536936 PLEKHD1A6NEE1 506 aa18.08■□□□□ 0.48
FERMT1-204ENST00000536936 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
FERMT1-204ENST00000536936 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
FERMT1-204ENST00000536936 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
FERMT1-204ENST00000536936 PTPRGP23470 1445 aa18.03■□□□□ 0.48
FERMT1-204ENST00000536936 NUP160Q12769 1436 aa18.02■□□□□ 0.48
FERMT1-204ENST00000536936 CHD1O14646 1710 aa17.99■□□□□ 0.47
FERMT1-204ENST00000536936 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
FERMT1-204ENST00000536936 NAIPQ13075 1403 aa17.99■□□□□ 0.47
FERMT1-204ENST00000536936 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
FERMT1-204ENST00000536936 TONSLQ96HA7 1378 aa17.98■□□□□ 0.47
FERMT1-204ENST00000536936 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
FERMT1-204ENST00000536936 KIF14Q15058 1648 aa17.96■□□□□ 0.47
FERMT1-204ENST00000536936 ZNF326Q5BKZ1 582 aaKnown RBP17.95■□□□□ 0.46
FERMT1-204ENST00000536936 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
FERMT1-204ENST00000536936 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
FERMT1-204ENST00000536936 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms