RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 PRG4Q92954 1404 aaPredicted RBP22.83■■□□□ 1.25
MRPS35-202ENST00000536569 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
MRPS35-202ENST00000536569 KIAA0586Q9BVV6 1533 aa22.79■■□□□ 1.24
MRPS35-202ENST00000536569 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
MRPS35-202ENST00000536569 NPM1P06748 294 aaKnown RBP eCLIP22.6■■□□□ 1.21
MRPS35-202ENST00000536569 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
MRPS35-202ENST00000536569 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
MRPS35-202ENST00000536569 IQGAP2Q13576 1575 aa22.56■■□□□ 1.2
MRPS35-202ENST00000536569 MAPKBP1O60336 1514 aa22.55■■□□□ 1.2
MRPS35-202ENST00000536569 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
MRPS35-202ENST00000536569 PTPRGP23470 1445 aa22.53■■□□□ 1.2
MRPS35-202ENST00000536569 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
MRPS35-202ENST00000536569 ABCC10Q5T3U5 1492 aa22.49■■□□□ 1.19
MRPS35-202ENST00000536569 KIF13AQ9H1H9 1805 aa22.48■■□□□ 1.19
MRPS35-202ENST00000536569 UGGT2Q9NYU1 1516 aa22.45■■□□□ 1.18
MRPS35-202ENST00000536569 DISP1Q96F81 1524 aa22.43■■□□□ 1.18
MRPS35-202ENST00000536569 FAM69CQ0P6D2 419 aa22.43■■□□□ 1.18
MRPS35-202ENST00000536569 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
MRPS35-202ENST00000536569 DIP2BQ9P265 1576 aa22.4■■□□□ 1.18
MRPS35-202ENST00000536569 ABCC2Q92887 1545 aa22.4■■□□□ 1.18
MRPS35-202ENST00000536569 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
MRPS35-202ENST00000536569 UACAQ9BZF9 1416 aa22.37■■□□□ 1.17
MRPS35-202ENST00000536569 KIAA0556O60303 1618 aa22.34■■□□□ 1.17
MRPS35-202ENST00000536569 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.17
MRPS35-202ENST00000536569 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
MRPS35-202ENST00000536569 PLB1Q6P1J6 1458 aa22.32■■□□□ 1.16
MRPS35-202ENST00000536569 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
MRPS35-202ENST00000536569 KDM5BQ9UGL1 1544 aa22.28■■□□□ 1.16
MRPS35-202ENST00000536569 ASXL2Q76L83 1435 aa22.28■■□□□ 1.16
MRPS35-202ENST00000536569 GLI2P10070 1586 aa22.25■■□□□ 1.15
MRPS35-202ENST00000536569 EEA1Q15075 1411 aa22.24■■□□□ 1.15
MRPS35-202ENST00000536569 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
MRPS35-202ENST00000536569 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
MRPS35-202ENST00000536569 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
MRPS35-202ENST00000536569 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
MRPS35-202ENST00000536569 KDM6BO15054 1643 aa22.16■■□□□ 1.14
MRPS35-202ENST00000536569 TSPOAP1O95153 1857 aa22.15■■□□□ 1.14
MRPS35-202ENST00000536569 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
MRPS35-202ENST00000536569 ABCA8O94911 1581 aa22.14■■□□□ 1.13
MRPS35-202ENST00000536569 WDR7Q9Y4E6 1490 aa22.1■■□□□ 1.13
MRPS35-202ENST00000536569 PPRC1Q5VV67 1664 aaKnown RBP22.08■■□□□ 1.13
MRPS35-202ENST00000536569 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.13
MRPS35-202ENST00000536569 TEX14Q8IWB6 1497 aa22.07■■□□□ 1.12
MRPS35-202ENST00000536569 SAMD9Q5K651 1589 aa22.05■■□□□ 1.12
MRPS35-202ENST00000536569 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
MRPS35-202ENST00000536569 KIF21BO75037 1637 aa21.98■■□□□ 1.11
MRPS35-202ENST00000536569 CFAP43Q8NDM7 1665 aa21.96■■□□□ 1.11
MRPS35-202ENST00000536569 ATP10BO94823 1461 aa21.96■■□□□ 1.11
MRPS35-202ENST00000536569 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
MRPS35-202ENST00000536569 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
MRPS35-202ENST00000536569 KCNH8Q96L42 1107 aa21.93■■□□□ 1.1
MRPS35-202ENST00000536569 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
MRPS35-202ENST00000536569 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
MRPS35-202ENST00000536569 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
MRPS35-202ENST00000536569 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
MRPS35-202ENST00000536569 KDM4FA0A1W2PPD8 638 aa21.86■■□□□ 1.09
MRPS35-202ENST00000536569 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
MRPS35-202ENST00000536569 NUP153P49790 1475 aaKnown RBP21.84■■□□□ 1.09
MRPS35-202ENST00000536569 ARID3CA6NKF2 412 aa21.83■■□□□ 1.09
MRPS35-202ENST00000536569 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.08
MRPS35-202ENST00000536569 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
MRPS35-202ENST00000536569 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
MRPS35-202ENST00000536569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
MRPS35-202ENST00000536569 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
MRPS35-202ENST00000536569 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
MRPS35-202ENST00000536569 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
MRPS35-202ENST00000536569 PLEKHD1A6NEE1 506 aa21.75■■□□□ 1.07
MRPS35-202ENST00000536569 NEO1Q92859 1461 aa21.73■■□□□ 1.07
MRPS35-202ENST00000536569 ADGRL1O94910 1474 aa21.72■■□□□ 1.07
MRPS35-202ENST00000536569 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
MRPS35-202ENST00000536569 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
MRPS35-202ENST00000536569 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
MRPS35-202ENST00000536569 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
MRPS35-202ENST00000536569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.054e-6■■□□□ 14.5
MRPS35-202ENST00000536569 CDK11AQ9UQ88 783 aaPredicted RBP21.6■■□□□ 1.05
MRPS35-202ENST00000536569 CDK13Q14004 1512 aaKnown RBP21.6■■□□□ 1.05
MRPS35-202ENST00000536569 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
MRPS35-202ENST00000536569 RAPGEF3O95398 923 aa21.58■■□□□ 1.05
MRPS35-202ENST00000536569 FANCAO15360 1455 aa21.57■■□□□ 1.04
MRPS35-202ENST00000536569 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
MRPS35-202ENST00000536569 DENND4BO75064 1496 aaPredicted RBP21.55■■□□□ 1.04
MRPS35-202ENST00000536569 TTC37Q6PGP7 1564 aa21.54■■□□□ 1.04
MRPS35-202ENST00000536569 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
MRPS35-202ENST00000536569 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
MRPS35-202ENST00000536569 PLCH2O75038 1416 aa21.52■■□□□ 1.04
MRPS35-202ENST00000536569 TROQ12816 1431 aaPredicted RBP21.48■■□□□ 1.03
MRPS35-202ENST00000536569 RICTORQ6R327 1708 aa21.48■■□□□ 1.03
MRPS35-202ENST00000536569 CLIP1P30622 1438 aa21.47■■□□□ 1.03
MRPS35-202ENST00000536569 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
MRPS35-202ENST00000536569 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.03
MRPS35-202ENST00000536569 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.03
MRPS35-202ENST00000536569 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
MRPS35-202ENST00000536569 KIF14Q15058 1648 aa21.45■■□□□ 1.02
MRPS35-202ENST00000536569 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
MRPS35-202ENST00000536569 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
MRPS35-202ENST00000536569 ADAMTSL3P82987 1691 aa21.42■■□□□ 1.02
MRPS35-202ENST00000536569 MYO5CQ9NQX4 1742 aa21.42■■□□□ 1.02
MRPS35-202ENST00000536569 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
MRPS35-202ENST00000536569 POGZQ7Z3K3 1410 aa21.4■■□□□ 1.02
MRPS35-202ENST00000536569 LRRIQ1Q96JM4 1722 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms