RNA–Protein interactions for RNA: ENST00000536563.1

CD4-205, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-205ENST00000536563 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
CD4-205ENST00000536563 KIAA0586Q9BVV6 1533 aa25.49■■□□□ 1.67
CD4-205ENST00000536563 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
CD4-205ENST00000536563 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
CD4-205ENST00000536563 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
CD4-205ENST00000536563 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
CD4-205ENST00000536563 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
CD4-205ENST00000536563 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
CD4-205ENST00000536563 EEA1Q15075 1411 aa25.37■■□□□ 1.65
CD4-205ENST00000536563 PRXQ9BXM0 1461 aa25.34■■□□□ 1.65
CD4-205ENST00000536563 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
CD4-205ENST00000536563 IQGAP2Q13576 1575 aa25.31■■□□□ 1.64
CD4-205ENST00000536563 CARMIL2Q6F5E8 1435 aa25.28■■□□□ 1.64
CD4-205ENST00000536563 PTPRGP23470 1445 aa25.19■■□□□ 1.62
CD4-205ENST00000536563 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
CD4-205ENST00000536563 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
CD4-205ENST00000536563 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
CD4-205ENST00000536563 NPM1P06748 294 aaKnown RBP eCLIP25.14■■□□□ 1.62
CD4-205ENST00000536563 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
CD4-205ENST00000536563 DISP1Q96F81 1524 aa25.12■■□□□ 1.61
CD4-205ENST00000536563 GOLGA3Q08378 1498 aa25.09■■□□□ 1.61
CD4-205ENST00000536563 KIAA0556O60303 1618 aa25.04■■□□□ 1.6
CD4-205ENST00000536563 KIF21BO75037 1637 aa25.04■■□□□ 1.6
CD4-205ENST00000536563 ADCY10Q96PN6 1610 aa25.01■■□□□ 1.59
CD4-205ENST00000536563 EHMT2Q96KQ7 1210 aa24.99■■□□□ 1.59
CD4-205ENST00000536563 UACAQ9BZF9 1416 aa24.99■■□□□ 1.59
CD4-205ENST00000536563 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
CD4-205ENST00000536563 RANGAP1P46060 587 aaPredicted RBP24.96■■□□□ 1.59
CD4-205ENST00000536563 P3H3Q8IVL6 736 aa24.95■■□□□ 1.58
CD4-205ENST00000536563 UHRF1BP1LA0JNW5 1464 aa24.94■■□□□ 1.58
CD4-205ENST00000536563 ABCC2Q92887 1545 aa24.91■■□□□ 1.58
CD4-205ENST00000536563 MAPKBP1O60336 1514 aa24.89■■□□□ 1.57
CD4-205ENST00000536563 FAM69CQ0P6D2 419 aa24.84■■□□□ 1.57
CD4-205ENST00000536563 SAMD9Q5K651 1589 aa24.84■■□□□ 1.57
CD4-205ENST00000536563 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.57
CD4-205ENST00000536563 ILDR1Q86SU0 546 aaPredicted RBP24.83■■□□□ 1.57
CD4-205ENST00000536563 ABCC10Q5T3U5 1492 aa24.82■■□□□ 1.56
CD4-205ENST00000536563 KDM5BQ9UGL1 1544 aa24.81■■□□□ 1.56
CD4-205ENST00000536563 ABCA8O94911 1581 aa24.78■■□□□ 1.56
CD4-205ENST00000536563 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
CD4-205ENST00000536563 EFCAB5A4FU69 1503 aa24.76■■□□□ 1.55
CD4-205ENST00000536563 FHOD3Q2V2M9 1422 aa24.76■■□□□ 1.55
CD4-205ENST00000536563 ZCCHC11Q5TAX3 1644 aaKnown RBP24.72■■□□□ 1.55
CD4-205ENST00000536563 DIP2BQ9P265 1576 aa24.71■■□□□ 1.55
CD4-205ENST00000536563 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.55
CD4-205ENST00000536563 ARID3CA6NKF2 412 aa24.69■■□□□ 1.54
CD4-205ENST00000536563 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.54
CD4-205ENST00000536563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
CD4-205ENST00000536563 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
CD4-205ENST00000536563 ATP10BO94823 1461 aa24.63■■□□□ 1.53
CD4-205ENST00000536563 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
CD4-205ENST00000536563 WDR7Q9Y4E6 1490 aa24.63■■□□□ 1.53
CD4-205ENST00000536563 EPRSP07814 1512 aaKnown RBP24.61■■□□□ 1.53
CD4-205ENST00000536563 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
CD4-205ENST00000536563 GLI2P10070 1586 aa24.6■■□□□ 1.53
CD4-205ENST00000536563 FMN1Q68DA7 1419 aa24.59■■□□□ 1.53
CD4-205ENST00000536563 NUP153P49790 1475 aaKnown RBP24.57■■□□□ 1.52
CD4-205ENST00000536563 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
CD4-205ENST00000536563 CLIP1P30622 1438 aa24.52■■□□□ 1.52
CD4-205ENST00000536563 TSPOAP1O95153 1857 aa24.5■■□□□ 1.51
CD4-205ENST00000536563 PLEKHD1A6NEE1 506 aa24.5■■□□□ 1.51
CD4-205ENST00000536563 CD109Q6YHK3 1445 aa24.45■■□□□ 1.51
CD4-205ENST00000536563 MAP3K4Q9Y6R4 1608 aa24.44■■□□□ 1.5
CD4-205ENST00000536563 TEX14Q8IWB6 1497 aa24.44■■□□□ 1.5
CD4-205ENST00000536563 LOC105371045A0A1W2PR82 267 aa24.43■■□□□ 1.5
CD4-205ENST00000536563 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
CD4-205ENST00000536563 CDK11AQ9UQ88 783 aaPredicted RBP24.41■■□□□ 1.5
CD4-205ENST00000536563 CFAP43Q8NDM7 1665 aa24.38■■□□□ 1.49
CD4-205ENST00000536563 CDK13Q14004 1512 aaKnown RBP24.38■■□□□ 1.49
CD4-205ENST00000536563 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
CD4-205ENST00000536563 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
CD4-205ENST00000536563 KDM6BO15054 1643 aa24.37■■□□□ 1.49
CD4-205ENST00000536563 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
CD4-205ENST00000536563 MAGI3Q5TCQ9 1506 aa24.36■■□□□ 1.49
CD4-205ENST00000536563 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
CD4-205ENST00000536563 FYCO1Q9BQS8 1478 aa24.29■■□□□ 1.48
CD4-205ENST00000536563 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
CD4-205ENST00000536563 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
CD4-205ENST00000536563 KDM4FA0A1W2PPD8 638 aa24.28■■□□□ 1.48
CD4-205ENST00000536563 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
CD4-205ENST00000536563 TROQ12816 1431 aaPredicted RBP24.23■■□□□ 1.47
CD4-205ENST00000536563 COL17A1Q9UMD9 1497 aaPredicted RBP24.23■■□□□ 1.47
CD4-205ENST00000536563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.21■■□□□ 1.47
CD4-205ENST00000536563 NEO1Q92859 1461 aa24.19■■□□□ 1.46
CD4-205ENST00000536563 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
CD4-205ENST00000536563 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
CD4-205ENST00000536563 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
CD4-205ENST00000536563 KIF14Q15058 1648 aa24.14■■□□□ 1.46
CD4-205ENST00000536563 PLCH2O75038 1416 aa24.12■■□□□ 1.45
CD4-205ENST00000536563 FANCAO15360 1455 aa24.12■■□□□ 1.45
CD4-205ENST00000536563 EFCAB2Q5VUJ9 269 aa24.11■■□□□ 1.45
CD4-205ENST00000536563 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
CD4-205ENST00000536563 RAPGEF3O95398 923 aa24.09■■□□□ 1.45
CD4-205ENST00000536563 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.45
CD4-205ENST00000536563 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
CD4-205ENST00000536563 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
CD4-205ENST00000536563 DENND4BO75064 1496 aaPredicted RBP24.04■■□□□ 1.44
CD4-205ENST00000536563 MYO5CQ9NQX4 1742 aa24.02■■□□□ 1.44
CD4-205ENST00000536563 ARHGAP5Q13017 1502 aa24.01■■□□□ 1.43
CD4-205ENST00000536563 ADGRL1O94910 1474 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms