RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
PTPN21-202ENST00000536337 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
PTPN21-202ENST00000536337 CDK11AQ9UQ88 783 aaPredicted RBP17.94■□□□□ 0.46
PTPN21-202ENST00000536337 SYNJ1O43426 1573 aa17.89■□□□□ 0.46
PTPN21-202ENST00000536337 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
PTPN21-202ENST00000536337 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
PTPN21-202ENST00000536337 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
PTPN21-202ENST00000536337 KIF21BO75037 1637 aa17.84■□□□□ 0.45
PTPN21-202ENST00000536337 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
PTPN21-202ENST00000536337 FOXD1Q16676 465 aa17.83■□□□□ 0.44
PTPN21-202ENST00000536337 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
PTPN21-202ENST00000536337 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
PTPN21-202ENST00000536337 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
PTPN21-202ENST00000536337 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
PTPN21-202ENST00000536337 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
PTPN21-202ENST00000536337 ARAP1Q96P48 1450 aa17.77■□□□□ 0.43
PTPN21-202ENST00000536337 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
PTPN21-202ENST00000536337 TSHZ2Q9NRE2 1034 aa17.75■□□□□ 0.43
PTPN21-202ENST00000536337 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
PTPN21-202ENST00000536337 IGF1RP08069 1367 aa17.73■□□□□ 0.43
PTPN21-202ENST00000536337 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
PTPN21-202ENST00000536337 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
PTPN21-202ENST00000536337 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
PTPN21-202ENST00000536337 ARHGAP35Q9NRY4 1499 aa17.66■□□□□ 0.42
PTPN21-202ENST00000536337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTPN21-202ENST00000536337 TMC1Q8TDI8 760 aa17.65■□□□□ 0.42
PTPN21-202ENST00000536337 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
PTPN21-202ENST00000536337 ANP32EQ9BTT0 268 aa17.64■□□□□ 0.41
PTPN21-202ENST00000536337 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
PTPN21-202ENST00000536337 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
PTPN21-202ENST00000536337 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
PTPN21-202ENST00000536337 PRXQ9BXM0 1461 aa17.61■□□□□ 0.41
PTPN21-202ENST00000536337 EIF4G1Q04637 1599 aaKnown RBP17.6■□□□□ 0.41
PTPN21-202ENST00000536337 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
PTPN21-202ENST00000536337 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
PTPN21-202ENST00000536337 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
PTPN21-202ENST00000536337 CCER2I3L3R5 266 aa17.59■□□□□ 0.41
PTPN21-202ENST00000536337 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
PTPN21-202ENST00000536337 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.41
PTPN21-202ENST00000536337 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
PTPN21-202ENST00000536337 NBR1Q14596 966 aa17.57■□□□□ 0.4
PTPN21-202ENST00000536337 L3MBTL2Q969R5 705 aa17.57■□□□□ 0.4
PTPN21-202ENST00000536337 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
PTPN21-202ENST00000536337 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
PTPN21-202ENST00000536337 MPHOSPH9Q99550 1183 aa17.55■□□□□ 0.4
PTPN21-202ENST00000536337 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
PTPN21-202ENST00000536337 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
PTPN21-202ENST00000536337 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
PTPN21-202ENST00000536337 CUX1P39880 1505 aa17.53■□□□□ 0.4
PTPN21-202ENST00000536337 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
PTPN21-202ENST00000536337 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
PTPN21-202ENST00000536337 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
PTPN21-202ENST00000536337 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
PTPN21-202ENST00000536337 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
PTPN21-202ENST00000536337 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
PTPN21-202ENST00000536337 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
PTPN21-202ENST00000536337 CARD11Q9BXL7 1154 aa17.47■□□□□ 0.39
PTPN21-202ENST00000536337 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
PTPN21-202ENST00000536337 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
PTPN21-202ENST00000536337 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
PTPN21-202ENST00000536337 CFTRP13569 1480 aa17.45■□□□□ 0.38
PTPN21-202ENST00000536337 PPP4R2Q9NY27 417 aa17.44■□□□□ 0.38
PTPN21-202ENST00000536337 PKD2Q13563 968 aa17.42■□□□□ 0.38
PTPN21-202ENST00000536337 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
PTPN21-202ENST00000536337 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
PTPN21-202ENST00000536337 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
PTPN21-202ENST00000536337 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
PTPN21-202ENST00000536337 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
PTPN21-202ENST00000536337 FGD6Q6ZV73 1430 aa17.37■□□□□ 0.37
PTPN21-202ENST00000536337 NESP48681 1621 aa17.35■□□□□ 0.37
PTPN21-202ENST00000536337 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
PTPN21-202ENST00000536337 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
PTPN21-202ENST00000536337 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
PTPN21-202ENST00000536337 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
PTPN21-202ENST00000536337 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.37
PTPN21-202ENST00000536337 PRKRIP1Q9H875 184 aaPredicted RBP17.33■□□□□ 0.37
PTPN21-202ENST00000536337 WASHC2AQ641Q2 1341 aa17.33■□□□□ 0.37
PTPN21-202ENST00000536337 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
PTPN21-202ENST00000536337 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
PTPN21-202ENST00000536337 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
PTPN21-202ENST00000536337 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
PTPN21-202ENST00000536337 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
PTPN21-202ENST00000536337 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
PTPN21-202ENST00000536337 CASKIN1Q8WXD9 1431 aa17.25■□□□□ 0.35
PTPN21-202ENST00000536337 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
PTPN21-202ENST00000536337 NUP155O75694 1391 aa17.24■□□□□ 0.35
PTPN21-202ENST00000536337 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
PTPN21-202ENST00000536337 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
PTPN21-202ENST00000536337 NCOA2Q15596 1464 aa17.23■□□□□ 0.35
PTPN21-202ENST00000536337 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPN21-202ENST00000536337 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
PTPN21-202ENST00000536337 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
PTPN21-202ENST00000536337 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPN21-202ENST00000536337 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-202ENST00000536337 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
PTPN21-202ENST00000536337 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
PTPN21-202ENST00000536337 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
PTPN21-202ENST00000536337 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
PTPN21-202ENST00000536337 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
PTPN21-202ENST00000536337 MAPKBP1O60336 1514 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms