RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 CTTNBP2Q8WZ74 1663 aa29■■■□□ 2.23
CACNB3-202ENST00000536187 RANGAP1P46060 587 aaPredicted RBP28.96■■■□□ 2.23
CACNB3-202ENST00000536187 NUP160Q12769 1436 aa28.94■■■□□ 2.22
CACNB3-202ENST00000536187 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
CACNB3-202ENST00000536187 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
CACNB3-202ENST00000536187 KIAA0586Q9BVV6 1533 aa28.84■■■□□ 2.21
CACNB3-202ENST00000536187 CLIP1P30622 1438 aa28.8■■■□□ 2.2
CACNB3-202ENST00000536187 CLASP1Q7Z460 1538 aa28.75■■■□□ 2.19
CACNB3-202ENST00000536187 ARHGAP35Q9NRY4 1499 aa28.75■■■□□ 2.19
CACNB3-202ENST00000536187 UGGT2Q9NYU1 1516 aa28.69■■■□□ 2.18
CACNB3-202ENST00000536187 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
CACNB3-202ENST00000536187 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
CACNB3-202ENST00000536187 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
CACNB3-202ENST00000536187 JPH4Q96JJ6 628 aa28.65■■■□□ 2.18
CACNB3-202ENST00000536187 DISP1Q96F81 1524 aa28.65■■■□□ 2.18
CACNB3-202ENST00000536187 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
CACNB3-202ENST00000536187 OSCARQ8IYS5 282 aa28.63■■■□□ 2.17
CACNB3-202ENST00000536187 FHOD3Q2V2M9 1422 aa28.63■■■□□ 2.17
CACNB3-202ENST00000536187 EFCAB5A4FU69 1503 aa28.61■■■□□ 2.17
CACNB3-202ENST00000536187 ERCC6L2Q5T890 1561 aa28.6■■■□□ 2.17
CACNB3-202ENST00000536187 KIAA0556O60303 1618 aa28.59■■■□□ 2.17
CACNB3-202ENST00000536187 PRG4Q92954 1404 aaPredicted RBP28.56■■■□□ 2.16
CACNB3-202ENST00000536187 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
CACNB3-202ENST00000536187 VPS8Q8N3P4 1428 aa28.45■■■□□ 2.14
CACNB3-202ENST00000536187 CARMIL2Q6F5E8 1435 aa28.43■■■□□ 2.14
CACNB3-202ENST00000536187 PCF11O94913 1555 aaKnown RBP28.38■■■□□ 2.13
CACNB3-202ENST00000536187 FMN1Q68DA7 1419 aa28.32■■■□□ 2.12
CACNB3-202ENST00000536187 PLB1Q6P1J6 1458 aa28.3■■■□□ 2.12
CACNB3-202ENST00000536187 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
CACNB3-202ENST00000536187 PTPRGP23470 1445 aa28.27■■■□□ 2.12
CACNB3-202ENST00000536187 LRRIQ1Q96JM4 1722 aa28.27■■■□□ 2.12
CACNB3-202ENST00000536187 CASKIN1Q8WXD9 1431 aa28.25■■■□□ 2.11
CACNB3-202ENST00000536187 FYCO1Q9BQS8 1478 aa28.22■■■□□ 2.11
CACNB3-202ENST00000536187 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
CACNB3-202ENST00000536187 RAPGEF6Q8TEU7 1601 aa28.22■■■□□ 2.11
CACNB3-202ENST00000536187 ABCA8O94911 1581 aa28.21■■■□□ 2.11
CACNB3-202ENST00000536187 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
CACNB3-202ENST00000536187 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
CACNB3-202ENST00000536187 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
CACNB3-202ENST00000536187 PPARGC1BQ86YN6 1023 aaKnown RBP28.2■■■□□ 2.1
CACNB3-202ENST00000536187 ARID3CA6NKF2 412 aa28.19■■■□□ 2.1
CACNB3-202ENST00000536187 NUP153P49790 1475 aaKnown RBP28.17■■■□□ 2.1
CACNB3-202ENST00000536187 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
CACNB3-202ENST00000536187 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
CACNB3-202ENST00000536187 UACAQ9BZF9 1416 aa28.11■■■□□ 2.09
CACNB3-202ENST00000536187 EPRSP07814 1512 aaKnown RBP28.09■■■□□ 2.09
CACNB3-202ENST00000536187 TIAM1Q13009 1591 aa28.09■■■□□ 2.09
CACNB3-202ENST00000536187 CFAP43Q8NDM7 1665 aa28.09■■■□□ 2.09
CACNB3-202ENST00000536187 KANK4Q5T7N3 995 aaPredicted RBP28.08■■■□□ 2.09
CACNB3-202ENST00000536187 ADCY10Q96PN6 1610 aa28.07■■■□□ 2.08
CACNB3-202ENST00000536187 ABCC2Q92887 1545 aa28.07■■■□□ 2.08
CACNB3-202ENST00000536187 MAGI3Q5TCQ9 1506 aa28.02■■■□□ 2.08
CACNB3-202ENST00000536187 ATP10BO94823 1461 aa28■■■□□ 2.07
CACNB3-202ENST00000536187 UHRF1BP1LA0JNW5 1464 aa27.99■■■□□ 2.07
CACNB3-202ENST00000536187 APLP2Q06481 763 aa27.99■■■□□ 2.07
CACNB3-202ENST00000536187 CYB5RLQ6IPT4 315 aa27.99■■■□□ 2.07
CACNB3-202ENST00000536187 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
CACNB3-202ENST00000536187 CCDC18Q5T9S5 1454 aa27.99■■■□□ 2.07
CACNB3-202ENST00000536187 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.06
CACNB3-202ENST00000536187 ZCCHC11Q5TAX3 1644 aaKnown RBP27.94■■■□□ 2.06
CACNB3-202ENST00000536187 KDM5BQ9UGL1 1544 aa27.91■■■□□ 2.06
CACNB3-202ENST00000536187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.91■■■□□ 2.06
CACNB3-202ENST00000536187 HNRNPUL2Q1KMD3 747 aaKnown RBP27.91■■■□□ 2.06
CACNB3-202ENST00000536187 MTUS2Q5JR59 1369 aa27.84■■■□□ 2.05
CACNB3-202ENST00000536187 DNAJC5Q9H3Z4 198 aa27.83■■■□□ 2.05
CACNB3-202ENST00000536187 EHBP1L1Q8N3D4 1523 aa27.82■■■□□ 2.04
CACNB3-202ENST00000536187 KIF14Q15058 1648 aa27.79■■■□□ 2.04
CACNB3-202ENST00000536187 TROQ12816 1431 aaPredicted RBP27.77■■■□□ 2.04
CACNB3-202ENST00000536187 NCOA2Q15596 1464 aa27.73■■■□□ 2.03
CACNB3-202ENST00000536187 PHLDB1Q86UU1 1377 aa27.73■■■□□ 2.03
CACNB3-202ENST00000536187 SUPT6HQ7KZ85 1726 aaKnown RBP27.72■■■□□ 2.03
CACNB3-202ENST00000536187 PLEKHD1A6NEE1 506 aa27.72■■■□□ 2.03
CACNB3-202ENST00000536187 CDK11AQ9UQ88 783 aaPredicted RBP27.72■■■□□ 2.03
CACNB3-202ENST00000536187 ASXL2Q76L83 1435 aa27.7■■■□□ 2.02
CACNB3-202ENST00000536187 WDR7Q9Y4E6 1490 aa27.66■■■□□ 2.02
CACNB3-202ENST00000536187 NPM1P06748 294 aaKnown RBP eCLIP27.65■■■□□ 2.02
CACNB3-202ENST00000536187 KCNH8Q96L42 1107 aa27.64■■■□□ 2.02
CACNB3-202ENST00000536187 ABCC10Q5T3U5 1492 aa27.63■■■□□ 2.01
CACNB3-202ENST00000536187 TTC37Q6PGP7 1564 aa27.62■■■□□ 2.01
CACNB3-202ENST00000536187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.01
CACNB3-202ENST00000536187 MAPKBP1O60336 1514 aa27.6■■■□□ 2.01
CACNB3-202ENST00000536187 CDC42BPAQ5VT25 1732 aa27.55■■■□□ 2
CACNB3-202ENST00000536187 MYOM3Q5VTT5 1437 aa27.54■■■□□ 2
CACNB3-202ENST00000536187 GPATCH8Q9UKJ3 1502 aaKnown RBP27.53■■■□□ 2
CACNB3-202ENST00000536187 CCNB3Q8WWL7 1395 aa27.51■■□□□ 1.99
CACNB3-202ENST00000536187 RRBP1Q9P2E9 1410 aaKnown RBP27.51■■□□□ 1.99
CACNB3-202ENST00000536187 FGD6Q6ZV73 1430 aa27.5■■□□□ 1.99
CACNB3-202ENST00000536187 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
CACNB3-202ENST00000536187 ABCA9Q8IUA7 1624 aa27.47■■□□□ 1.99
CACNB3-202ENST00000536187 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
CACNB3-202ENST00000536187 PREX2Q70Z35 1606 aa27.45■■□□□ 1.98
CACNB3-202ENST00000536187 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.98
CACNB3-202ENST00000536187 PCGF6Q9BYE7 350 aa27.44■■□□□ 1.98
CACNB3-202ENST00000536187 MYO5CQ9NQX4 1742 aa27.44■■□□□ 1.98
CACNB3-202ENST00000536187 DIP2BQ9P265 1576 aa27.43■■□□□ 1.98
CACNB3-202ENST00000536187 ZNF644Q9H582 1327 aaPredicted RBP27.43■■□□□ 1.98
CACNB3-202ENST00000536187 PTPN23Q9H3S7 1636 aa27.43■■□□□ 1.98
CACNB3-202ENST00000536187 MIA2Q96PC5 1412 aa27.38■■□□□ 1.97
CACNB3-202ENST00000536187 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
CACNB3-202ENST00000536187 CFDP1Q9UEE9 299 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms