RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
VPS37C-203ENST00000536000 PRG4Q92954 1404 aaPredicted RBP21.37■■□□□ 1.01
VPS37C-203ENST00000536000 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
VPS37C-203ENST00000536000 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
VPS37C-203ENST00000536000 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
VPS37C-203ENST00000536000 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
VPS37C-203ENST00000536000 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
VPS37C-203ENST00000536000 EEA1Q15075 1411 aa21.24■□□□□ 0.99
VPS37C-203ENST00000536000 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
VPS37C-203ENST00000536000 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
VPS37C-203ENST00000536000 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
VPS37C-203ENST00000536000 IQGAP2Q13576 1575 aa21.19■□□□□ 0.98
VPS37C-203ENST00000536000 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
VPS37C-203ENST00000536000 PTPRGP23470 1445 aa21.14■□□□□ 0.98
VPS37C-203ENST00000536000 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
VPS37C-203ENST00000536000 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
VPS37C-203ENST00000536000 UGGT2Q9NYU1 1516 aa21.09■□□□□ 0.97
VPS37C-203ENST00000536000 DISP1Q96F81 1524 aa21.06■□□□□ 0.96
VPS37C-203ENST00000536000 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
VPS37C-203ENST00000536000 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
VPS37C-203ENST00000536000 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
VPS37C-203ENST00000536000 UBTFP17480 764 aaKnown RBP20.98■□□□□ 0.95
VPS37C-203ENST00000536000 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
VPS37C-203ENST00000536000 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
VPS37C-203ENST00000536000 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
VPS37C-203ENST00000536000 ADCY10Q96PN6 1610 aa20.96■□□□□ 0.95
VPS37C-203ENST00000536000 UACAQ9BZF9 1416 aa20.95■□□□□ 0.95
VPS37C-203ENST00000536000 KIF21BO75037 1637 aa20.95■□□□□ 0.94
VPS37C-203ENST00000536000 UHRF1BP1LA0JNW5 1464 aa20.9■□□□□ 0.94
VPS37C-203ENST00000536000 FAM69CQ0P6D2 419 aa20.89■□□□□ 0.93
VPS37C-203ENST00000536000 ABCC2Q92887 1545 aa20.88■□□□□ 0.93
VPS37C-203ENST00000536000 MAPKBP1O60336 1514 aa20.85■□□□□ 0.93
VPS37C-203ENST00000536000 PLB1Q6P1J6 1458 aa20.83■□□□□ 0.93
VPS37C-203ENST00000536000 ABCC10Q5T3U5 1492 aa20.81■□□□□ 0.92
VPS37C-203ENST00000536000 KDM5BQ9UGL1 1544 aa20.8■□□□□ 0.92
VPS37C-203ENST00000536000 SAMD9Q5K651 1589 aa20.79■□□□□ 0.92
VPS37C-203ENST00000536000 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
VPS37C-203ENST00000536000 ABCA8O94911 1581 aa20.76■□□□□ 0.91
VPS37C-203ENST00000536000 KIF13AQ9H1H9 1805 aa20.76■□□□□ 0.91
VPS37C-203ENST00000536000 FHOD3Q2V2M9 1422 aa20.75■□□□□ 0.91
VPS37C-203ENST00000536000 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
VPS37C-203ENST00000536000 EFCAB5A4FU69 1503 aa20.72■□□□□ 0.91
VPS37C-203ENST00000536000 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
VPS37C-203ENST00000536000 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
VPS37C-203ENST00000536000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
VPS37C-203ENST00000536000 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
VPS37C-203ENST00000536000 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
VPS37C-203ENST00000536000 ATP10BO94823 1461 aa20.67■□□□□ 0.9
VPS37C-203ENST00000536000 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.9
VPS37C-203ENST00000536000 EPRSP07814 1512 aaKnown RBP20.64■□□□□ 0.9
VPS37C-203ENST00000536000 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
VPS37C-203ENST00000536000 WDR7Q9Y4E6 1490 aa20.63■□□□□ 0.89
VPS37C-203ENST00000536000 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
VPS37C-203ENST00000536000 GLI2P10070 1586 aa20.63■□□□□ 0.89
VPS37C-203ENST00000536000 TSPOAP1O95153 1857 aa20.61■□□□□ 0.89
VPS37C-203ENST00000536000 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
VPS37C-203ENST00000536000 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
VPS37C-203ENST00000536000 NUP153P49790 1475 aaKnown RBP20.58■□□□□ 0.89
VPS37C-203ENST00000536000 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
VPS37C-203ENST00000536000 CLIP1P30622 1438 aa20.53■□□□□ 0.88
VPS37C-203ENST00000536000 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
VPS37C-203ENST00000536000 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
VPS37C-203ENST00000536000 MAP3K4Q9Y6R4 1608 aa20.49■□□□□ 0.87
VPS37C-203ENST00000536000 TEX14Q8IWB6 1497 aa20.48■□□□□ 0.87
VPS37C-203ENST00000536000 PPRC1Q5VV67 1664 aaKnown RBP20.45■□□□□ 0.86
VPS37C-203ENST00000536000 KDM6BO15054 1643 aa20.44■□□□□ 0.86
VPS37C-203ENST00000536000 CFAP43Q8NDM7 1665 aa20.44■□□□□ 0.86
VPS37C-203ENST00000536000 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
VPS37C-203ENST00000536000 HECW1Q76N89 1606 aa20.43■□□□□ 0.86
VPS37C-203ENST00000536000 CDK13Q14004 1512 aaKnown RBP20.43■□□□□ 0.86
VPS37C-203ENST00000536000 CASKIN1Q8WXD9 1431 aa20.41■□□□□ 0.86
VPS37C-203ENST00000536000 CEP162Q5TB80 1403 aa20.39■□□□□ 0.85
VPS37C-203ENST00000536000 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
VPS37C-203ENST00000536000 COL17A1Q9UMD9 1497 aaPredicted RBP20.37■□□□□ 0.85
VPS37C-203ENST00000536000 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
VPS37C-203ENST00000536000 PCF11O94913 1555 aaKnown RBP20.32■□□□□ 0.84
VPS37C-203ENST00000536000 CCDC18Q5T9S5 1454 aa20.31■□□□□ 0.84
VPS37C-203ENST00000536000 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
VPS37C-203ENST00000536000 TROQ12816 1431 aaPredicted RBP20.31■□□□□ 0.84
VPS37C-203ENST00000536000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.3■□□□□ 0.842e-7■■■□□ 19.1
VPS37C-203ENST00000536000 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.84
VPS37C-203ENST00000536000 NEO1Q92859 1461 aa20.27■□□□□ 0.84
VPS37C-203ENST00000536000 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
VPS37C-203ENST00000536000 EFCAB2Q5VUJ9 269 aa20.25■□□□□ 0.83
VPS37C-203ENST00000536000 RAPGEF3O95398 923 aa20.24■□□□□ 0.83
VPS37C-203ENST00000536000 PLCH2O75038 1416 aa20.24■□□□□ 0.83
VPS37C-203ENST00000536000 TTC37Q6PGP7 1564 aa20.23■□□□□ 0.83
VPS37C-203ENST00000536000 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
VPS37C-203ENST00000536000 AKNAQ7Z591 1439 aa20.23■□□□□ 0.83
VPS37C-203ENST00000536000 FANCAO15360 1455 aa20.22■□□□□ 0.83
VPS37C-203ENST00000536000 KIF14Q15058 1648 aa20.2■□□□□ 0.82
VPS37C-203ENST00000536000 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
VPS37C-203ENST00000536000 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
VPS37C-203ENST00000536000 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
VPS37C-203ENST00000536000 CFAP74Q9C0B2 1584 aa20.14■□□□□ 0.81
VPS37C-203ENST00000536000 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
VPS37C-203ENST00000536000 SCAPERQ9BY12 1400 aa20.13■□□□□ 0.81
VPS37C-203ENST00000536000 KDM4FA0A1W2PPD8 638 aa20.12■□□□□ 0.81
VPS37C-203ENST00000536000 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
VPS37C-203ENST00000536000 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms