RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 FBLN2P98095 1184 aa32.99■■■□□ 2.87
PDXDC1-205ENST00000535621 CHMP7Q8WUX9 453 aaPredicted RBP32.95■■■□□ 2.87
PDXDC1-205ENST00000535621 CHD1O14646 1710 aa32.9■■■□□ 2.86
PDXDC1-205ENST00000535621 VPS8Q8N3P4 1428 aa32.88■■■□□ 2.85
PDXDC1-205ENST00000535621 ARHGAP35Q9NRY4 1499 aa32.88■■■□□ 2.85
PDXDC1-205ENST00000535621 PCGF6Q9BYE7 350 aa32.87■■■□□ 2.85
PDXDC1-205ENST00000535621 CEP170Q5SW79 1584 aa32.87■■■□□ 2.85
PDXDC1-205ENST00000535621 TRIM26Q12899 539 aaPredicted RBP32.85■■■□□ 2.85
PDXDC1-205ENST00000535621 ARAP1Q96P48 1450 aa32.85■■■□□ 2.85
PDXDC1-205ENST00000535621 IQGAP2Q13576 1575 aa32.8■■■□□ 2.84
PDXDC1-205ENST00000535621 PPARGC1BQ86YN6 1023 aaKnown RBP32.77■■■□□ 2.84
PDXDC1-205ENST00000535621 P3H3Q8IVL6 736 aa32.77■■■□□ 2.84
PDXDC1-205ENST00000535621 NUP160Q12769 1436 aa32.75■■■□□ 2.83
PDXDC1-205ENST00000535621 KIAA0586Q9BVV6 1533 aa32.73■■■□□ 2.83
PDXDC1-205ENST00000535621 SAMD9Q5K651 1589 aa32.68■■■□□ 2.82
PDXDC1-205ENST00000535621 FHOD3Q2V2M9 1422 aa32.67■■■□□ 2.82
PDXDC1-205ENST00000535621 EFCAB5A4FU69 1503 aa32.66■■■□□ 2.82
PDXDC1-205ENST00000535621 UGGT2Q9NYU1 1516 aa32.6■■■□□ 2.81
PDXDC1-205ENST00000535621 DISP1Q96F81 1524 aa32.53■■■□□ 2.8
PDXDC1-205ENST00000535621 APLP2Q06481 763 aa32.51■■■□□ 2.8
PDXDC1-205ENST00000535621 KIAA0556O60303 1618 aa32.5■■■□□ 2.79
PDXDC1-205ENST00000535621 JPH4Q96JJ6 628 aa32.49■■■□□ 2.79
PDXDC1-205ENST00000535621 TTBK1Q5TCY1 1321 aaPredicted RBP32.47■■■□□ 2.79
PDXDC1-205ENST00000535621 PCF11O94913 1555 aaKnown RBP32.46■■■□□ 2.79
PDXDC1-205ENST00000535621 CLASP1Q7Z460 1538 aa32.43■■■□□ 2.78
PDXDC1-205ENST00000535621 SHROOM2Q13796 1616 aa32.38■■■□□ 2.77
PDXDC1-205ENST00000535621 FMN1Q68DA7 1419 aa32.35■■■□□ 2.77
PDXDC1-205ENST00000535621 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
PDXDC1-205ENST00000535621 ERCC6L2Q5T890 1561 aa32.33■■■□□ 2.77
PDXDC1-205ENST00000535621 ATP1B4Q9UN42 357 aaPredicted RBP32.32■■■□□ 2.76
PDXDC1-205ENST00000535621 LRRIQ1Q96JM4 1722 aa32.29■■■□□ 2.76
PDXDC1-205ENST00000535621 CARMIL2Q6F5E8 1435 aa32.29■■■□□ 2.76
PDXDC1-205ENST00000535621 CASKIN1Q8WXD9 1431 aa32.29■■■□□ 2.76
PDXDC1-205ENST00000535621 MAP3K1Q13233 1512 aa32.29■■■□□ 2.76
PDXDC1-205ENST00000535621 KANK4Q5T7N3 995 aaPredicted RBP32.28■■■□□ 2.76
PDXDC1-205ENST00000535621 FYCO1Q9BQS8 1478 aa32.27■■■□□ 2.76
PDXDC1-205ENST00000535621 TIAM1Q13009 1591 aa32.24■■■□□ 2.75
PDXDC1-205ENST00000535621 OSCARQ8IYS5 282 aa32.21■■■□□ 2.75
PDXDC1-205ENST00000535621 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
PDXDC1-205ENST00000535621 PLB1Q6P1J6 1458 aa32.15■■■□□ 2.74
PDXDC1-205ENST00000535621 ARID3CA6NKF2 412 aa32.14■■■□□ 2.74
PDXDC1-205ENST00000535621 RAPGEF6Q8TEU7 1601 aa32.14■■■□□ 2.73
PDXDC1-205ENST00000535621 HECW1Q76N89 1606 aa32.12■■■□□ 2.73
PDXDC1-205ENST00000535621 LRRC9Q6ZRR7 1453 aa32.11■■■□□ 2.73
PDXDC1-205ENST00000535621 PTPRGP23470 1445 aa32.07■■■□□ 2.72
PDXDC1-205ENST00000535621 CDK13Q14004 1512 aaKnown RBP32.06■■■□□ 2.72
PDXDC1-205ENST00000535621 NUP153P49790 1475 aaKnown RBP32.06■■■□□ 2.72
PDXDC1-205ENST00000535621 EPRSP07814 1512 aaKnown RBP32.04■■■□□ 2.72
PDXDC1-205ENST00000535621 ABCA8O94911 1581 aa32.03■■■□□ 2.72
PDXDC1-205ENST00000535621 HRCP23327 699 aa31.99■■■□□ 2.71
PDXDC1-205ENST00000535621 MAGI3Q5TCQ9 1506 aa31.97■■■□□ 2.71
PDXDC1-205ENST00000535621 CCDC18Q5T9S5 1454 aa31.96■■■□□ 2.71
PDXDC1-205ENST00000535621 RRBP1Q9P2E9 1410 aaKnown RBP31.93■■■□□ 2.7
PDXDC1-205ENST00000535621 UACAQ9BZF9 1416 aa31.87■■■□□ 2.69
PDXDC1-205ENST00000535621 MTUS2Q5JR59 1369 aa31.87■■■□□ 2.69
PDXDC1-205ENST00000535621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.85■■■□□ 2.69
PDXDC1-205ENST00000535621 HNRNPUL2Q1KMD3 747 aaKnown RBP31.85■■■□□ 2.69
PDXDC1-205ENST00000535621 PHLDB1Q86UU1 1377 aa31.83■■■□□ 2.69
PDXDC1-205ENST00000535621 ATP10BO94823 1461 aa31.82■■■□□ 2.68
PDXDC1-205ENST00000535621 EHBP1L1Q8N3D4 1523 aa31.81■■■□□ 2.68
PDXDC1-205ENST00000535621 ABCC2Q92887 1545 aa31.81■■■□□ 2.68
PDXDC1-205ENST00000535621 CCNB3Q8WWL7 1395 aa31.81■■■□□ 2.68
PDXDC1-205ENST00000535621 ARHGEF11O15085 1522 aa31.77■■■□□ 2.68
PDXDC1-205ENST00000535621 SUPT6HQ7KZ85 1726 aaKnown RBP31.75■■■□□ 2.67
PDXDC1-205ENST00000535621 ADCY10Q96PN6 1610 aa31.73■■■□□ 2.67
PDXDC1-205ENST00000535621 NCOA2Q15596 1464 aa31.72■■■□□ 2.67
PDXDC1-205ENST00000535621 UHRF1BP1LA0JNW5 1464 aa31.68■■■□□ 2.66
PDXDC1-205ENST00000535621 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
PDXDC1-205ENST00000535621 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
PDXDC1-205ENST00000535621 ZCCHC11Q5TAX3 1644 aaKnown RBP31.67■■■□□ 2.66
PDXDC1-205ENST00000535621 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
PDXDC1-205ENST00000535621 KIF14Q15058 1648 aa31.66■■■□□ 2.66
PDXDC1-205ENST00000535621 TROQ12816 1431 aaPredicted RBP31.64■■■□□ 2.66
PDXDC1-205ENST00000535621 CDK11AQ9UQ88 783 aaPredicted RBP31.63■■■□□ 2.65
PDXDC1-205ENST00000535621 KDM5BQ9UGL1 1544 aa31.61■■■□□ 2.65
PDXDC1-205ENST00000535621 FGD6Q6ZV73 1430 aa31.58■■■□□ 2.65
PDXDC1-205ENST00000535621 PLEKHD1A6NEE1 506 aa31.58■■■□□ 2.65
PDXDC1-205ENST00000535621 MYOM3Q5VTT5 1437 aa31.56■■■□□ 2.64
PDXDC1-205ENST00000535621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.55■■■□□ 2.646e-6■□□□□ 9.1
PDXDC1-205ENST00000535621 ZEB1P37275 1124 aaPredicted RBP31.53■■■□□ 2.64
PDXDC1-205ENST00000535621 FAM50AQ14320 339 aaKnown RBP31.53■■■□□ 2.64
PDXDC1-205ENST00000535621 CCER1Q8TC90 406 aaPredicted RBP31.53■■■□□ 2.64
PDXDC1-205ENST00000535621 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
PDXDC1-205ENST00000535621 ITGAEP38570 1179 aa31.48■■■□□ 2.63
PDXDC1-205ENST00000535621 ABCC10Q5T3U5 1492 aa31.44■■■□□ 2.62
PDXDC1-205ENST00000535621 PTPN23Q9H3S7 1636 aa31.42■■■□□ 2.62
PDXDC1-205ENST00000535621 CDC42BPAQ5VT25 1732 aa31.42■■■□□ 2.62
PDXDC1-205ENST00000535621 KCNH8Q96L42 1107 aa31.41■■■□□ 2.62
PDXDC1-205ENST00000535621 TTC37Q6PGP7 1564 aa31.39■■■□□ 2.62
PDXDC1-205ENST00000535621 GPATCH8Q9UKJ3 1502 aaKnown RBP31.38■■■□□ 2.61
PDXDC1-205ENST00000535621 MIA2Q96PC5 1412 aa31.37■■■□□ 2.61
PDXDC1-205ENST00000535621 ITSN2Q9NZM3 1697 aa31.36■■■□□ 2.61
PDXDC1-205ENST00000535621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.36■■■□□ 2.612e-7■■■■■ 47.7
PDXDC1-205ENST00000535621 TCOF1Q13428 1488 aaKnown RBP31.35■■■□□ 2.61
PDXDC1-205ENST00000535621 ASXL2Q76L83 1435 aa31.33■■■□□ 2.61
PDXDC1-205ENST00000535621 WDR7Q9Y4E6 1490 aa31.33■■■□□ 2.61
PDXDC1-205ENST00000535621 ZNF644Q9H582 1327 aaPredicted RBP31.32■■■□□ 2.6
PDXDC1-205ENST00000535621 NPM1P06748 294 aaKnown RBP eCLIP31.3■■■□□ 2.6
PDXDC1-205ENST00000535621 CDC42BPBQ9Y5S2 1711 aa31.29■■■□□ 2.6
PDXDC1-205ENST00000535621 CFDP1Q9UEE9 299 aaPredicted RBP31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms