RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
CHFR-210ENST00000535527 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
CHFR-210ENST00000535527 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
CHFR-210ENST00000535527 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
CHFR-210ENST00000535527 CTTNBP2Q8WZ74 1663 aa22.1■■□□□ 1.13
CHFR-210ENST00000535527 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
CHFR-210ENST00000535527 EEA1Q15075 1411 aa22.06■■□□□ 1.12
CHFR-210ENST00000535527 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
CHFR-210ENST00000535527 KIF21BO75037 1637 aa22.04■■□□□ 1.12
CHFR-210ENST00000535527 KIAA0586Q9BVV6 1533 aa22.01■■□□□ 1.11
CHFR-210ENST00000535527 KIF13AQ9H1H9 1805 aa22■■□□□ 1.11
CHFR-210ENST00000535527 IQGAP2Q13576 1575 aa21.99■■□□□ 1.11
CHFR-210ENST00000535527 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
CHFR-210ENST00000535527 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
CHFR-210ENST00000535527 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
CHFR-210ENST00000535527 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.09
CHFR-210ENST00000535527 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
CHFR-210ENST00000535527 ABCC10Q5T3U5 1492 aa21.89■■□□□ 1.09
CHFR-210ENST00000535527 UGGT2Q9NYU1 1516 aa21.88■■□□□ 1.09
CHFR-210ENST00000535527 DISP1Q96F81 1524 aa21.87■■□□□ 1.09
CHFR-210ENST00000535527 KIAA0556O60303 1618 aa21.84■■□□□ 1.09
CHFR-210ENST00000535527 MAPKBP1O60336 1514 aa21.83■■□□□ 1.09
CHFR-210ENST00000535527 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
CHFR-210ENST00000535527 SAMD9Q5K651 1589 aa21.79■■□□□ 1.08
CHFR-210ENST00000535527 KDM4FA0A1W2PPD8 638 aa21.78■■□□□ 1.08
CHFR-210ENST00000535527 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
CHFR-210ENST00000535527 DIP2BQ9P265 1576 aa21.76■■□□□ 1.07
CHFR-210ENST00000535527 KDM6BO15054 1643 aa21.73■■□□□ 1.07
CHFR-210ENST00000535527 ADCY10Q96PN6 1610 aa21.72■■□□□ 1.07
CHFR-210ENST00000535527 ILDR1Q86SU0 546 aaPredicted RBP21.66■■□□□ 1.06
CHFR-210ENST00000535527 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
CHFR-210ENST00000535527 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
CHFR-210ENST00000535527 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
CHFR-210ENST00000535527 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
CHFR-210ENST00000535527 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
CHFR-210ENST00000535527 ABCA8O94911 1581 aa21.58■■□□□ 1.05
CHFR-210ENST00000535527 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.05
CHFR-210ENST00000535527 PTPRGP23470 1445 aa21.57■■□□□ 1.04
CHFR-210ENST00000535527 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
CHFR-210ENST00000535527 UBTFP17480 764 aaKnown RBP21.55■■□□□ 1.04
CHFR-210ENST00000535527 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
CHFR-210ENST00000535527 ABCC2Q92887 1545 aa21.55■■□□□ 1.04
CHFR-210ENST00000535527 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
CHFR-210ENST00000535527 P3H3Q8IVL6 736 aa21.54■■□□□ 1.04
CHFR-210ENST00000535527 UHRF1BP1LA0JNW5 1464 aa21.51■■□□□ 1.03
CHFR-210ENST00000535527 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
CHFR-210ENST00000535527 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
CHFR-210ENST00000535527 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
CHFR-210ENST00000535527 UACAQ9BZF9 1416 aa21.49■■□□□ 1.03
CHFR-210ENST00000535527 RAPGEF6Q8TEU7 1601 aa21.49■■□□□ 1.03
CHFR-210ENST00000535527 GLI2P10070 1586 aa21.48■■□□□ 1.03
CHFR-210ENST00000535527 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
CHFR-210ENST00000535527 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
CHFR-210ENST00000535527 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
CHFR-210ENST00000535527 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
CHFR-210ENST00000535527 PPRC1Q5VV67 1664 aaKnown RBP21.4■■□□□ 1.02
CHFR-210ENST00000535527 NUP153P49790 1475 aaKnown RBP21.4■■□□□ 1.02
CHFR-210ENST00000535527 CLIP1P30622 1438 aa21.4■■□□□ 1.02
CHFR-210ENST00000535527 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
CHFR-210ENST00000535527 TEX14Q8IWB6 1497 aa21.33■■□□□ 1.01
CHFR-210ENST00000535527 ATP10BO94823 1461 aa21.32■■□□□ 1
CHFR-210ENST00000535527 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
CHFR-210ENST00000535527 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
CHFR-210ENST00000535527 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
CHFR-210ENST00000535527 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
CHFR-210ENST00000535527 HECW1Q76N89 1606 aa21.31■■□□□ 1
CHFR-210ENST00000535527 MAP3K4Q9Y6R4 1608 aa21.29■■□□□ 1
CHFR-210ENST00000535527 ARID3CA6NKF2 412 aa21.28■■□□□ 1
CHFR-210ENST00000535527 FMN1Q68DA7 1419 aa21.27■■□□□ 1
CHFR-210ENST00000535527 WDR7Q9Y4E6 1490 aa21.22■□□□□ 0.99
CHFR-210ENST00000535527 CASKIN1Q8WXD9 1431 aa21.21■□□□□ 0.99
CHFR-210ENST00000535527 MAGI3Q5TCQ9 1506 aa21.2■□□□□ 0.98
CHFR-210ENST00000535527 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
CHFR-210ENST00000535527 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
CHFR-210ENST00000535527 KIF14Q15058 1648 aa21.15■□□□□ 0.98
CHFR-210ENST00000535527 ABCA9Q8IUA7 1624 aa21.12■□□□□ 0.97
CHFR-210ENST00000535527 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
CHFR-210ENST00000535527 FBXO41Q8TF61 875 aa21.12■□□□□ 0.97
CHFR-210ENST00000535527 VPS8Q8N3P4 1428 aa21.11■□□□□ 0.97
CHFR-210ENST00000535527 CD109Q6YHK3 1445 aa21.1■□□□□ 0.97
CHFR-210ENST00000535527 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
CHFR-210ENST00000535527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.07■□□□□ 0.96
CHFR-210ENST00000535527 TIAM1Q13009 1591 aa21.03■□□□□ 0.96
CHFR-210ENST00000535527 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
CHFR-210ENST00000535527 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
CHFR-210ENST00000535527 TROQ12816 1431 aaPredicted RBP21■□□□□ 0.95
CHFR-210ENST00000535527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
CHFR-210ENST00000535527 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
CHFR-210ENST00000535527 CDC42BPAQ5VT25 1732 aa20.98■□□□□ 0.95
CHFR-210ENST00000535527 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
CHFR-210ENST00000535527 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
CHFR-210ENST00000535527 CDC42BPBQ9Y5S2 1711 aa20.96■□□□□ 0.95
CHFR-210ENST00000535527 PHLDB1Q86UU1 1377 aa20.94■□□□□ 0.94
CHFR-210ENST00000535527 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
CHFR-210ENST00000535527 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
CHFR-210ENST00000535527 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
CHFR-210ENST00000535527 PTPRMP28827 1452 aa20.9■□□□□ 0.94
CHFR-210ENST00000535527 MAP3K1Q13233 1512 aa20.89■□□□□ 0.94
CHFR-210ENST00000535527 ADAMTSL3P82987 1691 aa20.88■□□□□ 0.93
CHFR-210ENST00000535527 FRMPD1Q5SYB0 1578 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms