RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RRBP1Q9P2E9 1410 aaKnown RBP19.82■□□□□ 0.76
LPCAT3-203ENST00000535479 MAPKBP1O60336 1514 aa19.79■□□□□ 0.76
LPCAT3-203ENST00000535479 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
LPCAT3-203ENST00000535479 CHIC2Q9UKJ5 165 aa19.77■□□□□ 0.76
LPCAT3-203ENST00000535479 IGF1RP08069 1367 aa19.77■□□□□ 0.76
LPCAT3-203ENST00000535479 FHOD3Q2V2M9 1422 aa19.75■□□□□ 0.75
LPCAT3-203ENST00000535479 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
LPCAT3-203ENST00000535479 SETD5Q9C0A6 1442 aa19.73■□□□□ 0.75
LPCAT3-203ENST00000535479 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
LPCAT3-203ENST00000535479 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
LPCAT3-203ENST00000535479 FOXD1Q16676 465 aa19.69■□□□□ 0.74
LPCAT3-203ENST00000535479 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
LPCAT3-203ENST00000535479 MYT1Q01538 1121 aa19.68■□□□□ 0.74
LPCAT3-203ENST00000535479 ANP32CO43423 234 aa19.68■□□□□ 0.74
LPCAT3-203ENST00000535479 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
LPCAT3-203ENST00000535479 NEFLP07196 543 aa19.65■□□□□ 0.74
LPCAT3-203ENST00000535479 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.73
LPCAT3-203ENST00000535479 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
LPCAT3-203ENST00000535479 ANP32EQ9BTT0 268 aa19.63■□□□□ 0.73
LPCAT3-203ENST00000535479 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
LPCAT3-203ENST00000535479 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
LPCAT3-203ENST00000535479 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
LPCAT3-203ENST00000535479 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
LPCAT3-203ENST00000535479 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
LPCAT3-203ENST00000535479 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
LPCAT3-203ENST00000535479 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
LPCAT3-203ENST00000535479 CFTRP13569 1480 aa19.57■□□□□ 0.72
LPCAT3-203ENST00000535479 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
LPCAT3-203ENST00000535479 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
LPCAT3-203ENST00000535479 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
LPCAT3-203ENST00000535479 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
LPCAT3-203ENST00000535479 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
LPCAT3-203ENST00000535479 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
LPCAT3-203ENST00000535479 NESP48681 1621 aa19.48■□□□□ 0.71
LPCAT3-203ENST00000535479 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
LPCAT3-203ENST00000535479 MSH5O43196 834 aa19.48■□□□□ 0.71
LPCAT3-203ENST00000535479 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.713e-6■■■■□ 23.3
LPCAT3-203ENST00000535479 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
LPCAT3-203ENST00000535479 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
LPCAT3-203ENST00000535479 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
LPCAT3-203ENST00000535479 C11orf95C9JLR9 678 aaPredicted RBP19.43■□□□□ 0.7
LPCAT3-203ENST00000535479 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
LPCAT3-203ENST00000535479 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
LPCAT3-203ENST00000535479 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.69
LPCAT3-203ENST00000535479 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
LPCAT3-203ENST00000535479 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
LPCAT3-203ENST00000535479 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
LPCAT3-203ENST00000535479 FGD6Q6ZV73 1430 aa19.35■□□□□ 0.69
LPCAT3-203ENST00000535479 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
LPCAT3-203ENST00000535479 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
LPCAT3-203ENST00000535479 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
LPCAT3-203ENST00000535479 MRS2Q9HD23 443 aa19.3■□□□□ 0.68
LPCAT3-203ENST00000535479 ZNF644Q9H582 1327 aaPredicted RBP19.29■□□□□ 0.68
LPCAT3-203ENST00000535479 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
LPCAT3-203ENST00000535479 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.68
LPCAT3-203ENST00000535479 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
LPCAT3-203ENST00000535479 ERICH6Q7L0X2 663 aa19.25■□□□□ 0.67
LPCAT3-203ENST00000535479 NAIPQ13075 1403 aa19.25■□□□□ 0.67
LPCAT3-203ENST00000535479 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
LPCAT3-203ENST00000535479 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
LPCAT3-203ENST00000535479 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
LPCAT3-203ENST00000535479 CASKIN1Q8WXD9 1431 aa19.23■□□□□ 0.67
LPCAT3-203ENST00000535479 EIF4G2P78344 907 aaKnown RBP eCLIP19.22■□□□□ 0.67
LPCAT3-203ENST00000535479 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
LPCAT3-203ENST00000535479 NBR1Q14596 966 aa19.2■□□□□ 0.66
LPCAT3-203ENST00000535479 UACAQ9BZF9 1416 aa19.19■□□□□ 0.66
LPCAT3-203ENST00000535479 CFAP43Q8NDM7 1665 aa19.19■□□□□ 0.66
LPCAT3-203ENST00000535479 KDM6BO15054 1643 aa19.18■□□□□ 0.66
LPCAT3-203ENST00000535479 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
LPCAT3-203ENST00000535479 TOPBP1Q92547 1522 aa19.18■□□□□ 0.66
LPCAT3-203ENST00000535479 TIMELESSQ9UNS1 1208 aa19.16■□□□□ 0.66
LPCAT3-203ENST00000535479 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
LPCAT3-203ENST00000535479 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
LPCAT3-203ENST00000535479 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
LPCAT3-203ENST00000535479 MAP3K1Q13233 1512 aa19.15■□□□□ 0.66
LPCAT3-203ENST00000535479 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
LPCAT3-203ENST00000535479 PRKRIP1Q9H875 184 aaPredicted RBP19.14■□□□□ 0.65
LPCAT3-203ENST00000535479 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
LPCAT3-203ENST00000535479 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
LPCAT3-203ENST00000535479 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
LPCAT3-203ENST00000535479 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
LPCAT3-203ENST00000535479 CDK13Q14004 1512 aaKnown RBP19.11■□□□□ 0.65
LPCAT3-203ENST00000535479 KDM2AQ9Y2K7 1162 aa19.11■□□□□ 0.65
LPCAT3-203ENST00000535479 DENND4BO75064 1496 aaPredicted RBP19.1■□□□□ 0.65
LPCAT3-203ENST00000535479 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
LPCAT3-203ENST00000535479 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
LPCAT3-203ENST00000535479 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
LPCAT3-203ENST00000535479 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.64
LPCAT3-203ENST00000535479 FBLN2P98095 1184 aa19.07■□□□□ 0.64
LPCAT3-203ENST00000535479 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
LPCAT3-203ENST00000535479 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
LPCAT3-203ENST00000535479 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
LPCAT3-203ENST00000535479 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
LPCAT3-203ENST00000535479 PPP4R2Q9NY27 417 aa19.04■□□□□ 0.64
LPCAT3-203ENST00000535479 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
LPCAT3-203ENST00000535479 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
LPCAT3-203ENST00000535479 NPM2Q86SE8 214 aaKnown RBP19.03■□□□□ 0.64
LPCAT3-203ENST00000535479 GAPVD1Q14C86 1478 aa19.02■□□□□ 0.64
LPCAT3-203ENST00000535479 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
LPCAT3-203ENST00000535479 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms