RNA–Protein interactions for RNA: ENST00000535296.5

SLC3A2-206, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5 BASIC

Gene SLC3A2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-206ENST00000535296 PCF11O94913 1555 aaKnown RBP28.97■■■□□ 2.23
SLC3A2-206ENST00000535296 CTTNBP2Q8WZ74 1663 aa28.97■■■□□ 2.23
SLC3A2-206ENST00000535296 FHOD3Q2V2M9 1422 aa28.96■■■□□ 2.23
SLC3A2-206ENST00000535296 CCNB3Q8WWL7 1395 aa28.96■■■□□ 2.23
SLC3A2-206ENST00000535296 GAPVD1Q14C86 1478 aa28.96■■■□□ 2.23
SLC3A2-206ENST00000535296 EFCAB5A4FU69 1503 aa28.93■■■□□ 2.22
SLC3A2-206ENST00000535296 LRRC9Q6ZRR7 1453 aa28.92■■■□□ 2.22
SLC3A2-206ENST00000535296 CFAP43Q8NDM7 1665 aa28.88■■■□□ 2.21
SLC3A2-206ENST00000535296 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
SLC3A2-206ENST00000535296 DIEXFQ68CQ4 756 aaKnown RBP28.85■■■□□ 2.21
SLC3A2-206ENST00000535296 DHX57Q6P158 1386 aaKnown RBP28.85■■■□□ 2.21
SLC3A2-206ENST00000535296 ATP1B4Q9UN42 357 aaPredicted RBP28.84■■■□□ 2.21
SLC3A2-206ENST00000535296 FYCO1Q9BQS8 1478 aa28.82■■■□□ 2.2
SLC3A2-206ENST00000535296 ZNF316A6NFI3 1004 aaPredicted RBP28.8■■■□□ 2.2
SLC3A2-206ENST00000535296 ITGAEP38570 1179 aa28.8■■■□□ 2.2
SLC3A2-206ENST00000535296 CASKIN1Q8WXD9 1431 aa28.8■■■□□ 2.2
SLC3A2-206ENST00000535296 PHLDB1Q86UU1 1377 aa28.8■■■□□ 2.2
SLC3A2-206ENST00000535296 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.22e-7■■■■■ 28.2
SLC3A2-206ENST00000535296 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
SLC3A2-206ENST00000535296 SAMD9Q5K651 1589 aa28.73■■■□□ 2.19
SLC3A2-206ENST00000535296 CLSPNQ9HAW4 1339 aa28.72■■■□□ 2.19
SLC3A2-206ENST00000535296 FMN1Q68DA7 1419 aa28.72■■■□□ 2.19
SLC3A2-206ENST00000535296 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.19
SLC3A2-206ENST00000535296 PBRM1Q86U86 1689 aa28.69■■■□□ 2.18
SLC3A2-206ENST00000535296 FAM50AQ14320 339 aaKnown RBP28.62■■■□□ 2.17
SLC3A2-206ENST00000535296 RAB3GAP2Q9H2M9 1393 aa28.61■■■□□ 2.17
SLC3A2-206ENST00000535296 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
SLC3A2-206ENST00000535296 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
SLC3A2-206ENST00000535296 LRRIQ1Q96JM4 1722 aa28.55■■■□□ 2.16
SLC3A2-206ENST00000535296 WDR62O43379 1518 aa28.55■■■□□ 2.16
SLC3A2-206ENST00000535296 SETD5Q9C0A6 1442 aa28.53■■■□□ 2.16
SLC3A2-206ENST00000535296 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
SLC3A2-206ENST00000535296 IFT140Q96RY7 1462 aa28.52■■■□□ 2.16
SLC3A2-206ENST00000535296 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
SLC3A2-206ENST00000535296 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
SLC3A2-206ENST00000535296 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
SLC3A2-206ENST00000535296 MAPKBP1O60336 1514 aa28.46■■■□□ 2.15
SLC3A2-206ENST00000535296 FGD6Q6ZV73 1430 aa28.45■■■□□ 2.15
SLC3A2-206ENST00000535296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.44■■■□□ 2.14
SLC3A2-206ENST00000535296 NCOA2Q15596 1464 aa28.39■■■□□ 2.14
SLC3A2-206ENST00000535296 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
SLC3A2-206ENST00000535296 SCAF1Q9H7N4 1312 aaKnown RBP28.37■■■□□ 2.13
SLC3A2-206ENST00000535296 EHBP1L1Q8N3D4 1523 aa28.37■■■□□ 2.13
SLC3A2-206ENST00000535296 EIF4G3O43432 1585 aaKnown RBP28.35■■■□□ 2.13
SLC3A2-206ENST00000535296 MAGI3Q5TCQ9 1506 aa28.34■■■□□ 2.13
SLC3A2-206ENST00000535296 SUPT6HQ7KZ85 1726 aaKnown RBP28.34■■■□□ 2.13
SLC3A2-206ENST00000535296 CCDC18Q5T9S5 1454 aa28.33■■■□□ 2.13
SLC3A2-206ENST00000535296 HECW1Q76N89 1606 aa28.33■■■□□ 2.13
SLC3A2-206ENST00000535296 MYOM3Q5VTT5 1437 aa28.32■■■□□ 2.12
SLC3A2-206ENST00000535296 UGGT2Q9NYU1 1516 aa28.32■■■□□ 2.12
SLC3A2-206ENST00000535296 MIER1Q8N108 512 aa28.31■■■□□ 2.12
SLC3A2-206ENST00000535296 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
SLC3A2-206ENST00000535296 NEUROD1Q13562 356 aa28.3■■■□□ 2.12
SLC3A2-206ENST00000535296 PTPRKQ15262 1439 aa28.27■■■□□ 2.12
SLC3A2-206ENST00000535296 ARHGEF11O15085 1522 aa28.26■■■□□ 2.11
SLC3A2-206ENST00000535296 EPRSP07814 1512 aaKnown RBP28.26■■■□□ 2.11
SLC3A2-206ENST00000535296 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
SLC3A2-206ENST00000535296 KIAA0586Q9BVV6 1533 aa28.24■■■□□ 2.11
SLC3A2-206ENST00000535296 CDK13Q14004 1512 aaKnown RBP28.23■■■□□ 2.11
SLC3A2-206ENST00000535296 CENPBP07199 599 aaPredicted RBP28.21■■■□□ 2.11
SLC3A2-206ENST00000535296 DISP1Q96F81 1524 aa28.2■■■□□ 2.11
SLC3A2-206ENST00000535296 KIAA0556O60303 1618 aa28.2■■■□□ 2.1
SLC3A2-206ENST00000535296 PTPN23Q9H3S7 1636 aa28.2■■■□□ 2.1
SLC3A2-206ENST00000535296 ARID3CA6NKF2 412 aa28.19■■■□□ 2.1
SLC3A2-206ENST00000535296 SIN3AQ96ST3 1273 aa28.19■■■□□ 2.1
SLC3A2-206ENST00000535296 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
SLC3A2-206ENST00000535296 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
SLC3A2-206ENST00000535296 YTHDC1Q96MU7 727 aaKnown RBP28.12■■■□□ 2.09
SLC3A2-206ENST00000535296 NAIPQ13075 1403 aa28.1■■■□□ 2.09
SLC3A2-206ENST00000535296 TCOF1Q13428 1488 aaKnown RBP28.1■■■□□ 2.09
SLC3A2-206ENST00000535296 CEP170Q5SW79 1584 aa28.09■■■□□ 2.09
SLC3A2-206ENST00000535296 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
SLC3A2-206ENST00000535296 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
SLC3A2-206ENST00000535296 NUP153P49790 1475 aaKnown RBP28.05■■■□□ 2.08
SLC3A2-206ENST00000535296 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
SLC3A2-206ENST00000535296 RAPGEF6Q8TEU7 1601 aa28.03■■■□□ 2.08
SLC3A2-206ENST00000535296 FBLN2P98095 1184 aa28.03■■■□□ 2.08
SLC3A2-206ENST00000535296 MIA2Q96PC5 1412 aa28■■■□□ 2.07
SLC3A2-206ENST00000535296 CHIC2Q9UKJ5 165 aa27.99■■■□□ 2.07
SLC3A2-206ENST00000535296 RRP7BPQ9NSQ0 103 aa27.98■■■□□ 2.07
SLC3A2-206ENST00000535296 TIMELESSQ9UNS1 1208 aa27.97■■■□□ 2.07
SLC3A2-206ENST00000535296 NUP160Q12769 1436 aa27.95■■■□□ 2.06
SLC3A2-206ENST00000535296 GCC2Q8IWJ2 1684 aa27.93■■■□□ 2.06
SLC3A2-206ENST00000535296 GTF3C3Q9Y5Q9 886 aa27.93■■■□□ 2.06
SLC3A2-206ENST00000535296 PLB1Q6P1J6 1458 aa27.91■■■□□ 2.06
SLC3A2-206ENST00000535296 PPP1R15AO75807 674 aaPredicted RBP27.89■■■□□ 2.06
SLC3A2-206ENST00000535296 AKNAQ7Z591 1439 aa27.89■■■□□ 2.06
SLC3A2-206ENST00000535296 KDM6BO15054 1643 aa27.88■■■□□ 2.05
SLC3A2-206ENST00000535296 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
SLC3A2-206ENST00000535296 TONSLQ96HA7 1378 aa27.86■■■□□ 2.05
SLC3A2-206ENST00000535296 CDK11AQ9UQ88 783 aaPredicted RBP27.85■■■□□ 2.05
SLC3A2-206ENST00000535296 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
SLC3A2-206ENST00000535296 PRG4Q92954 1404 aaPredicted RBP27.85■■■□□ 2.05
SLC3A2-206ENST00000535296 ZNF644Q9H582 1327 aaPredicted RBP27.82■■■□□ 2.04
SLC3A2-206ENST00000535296 DAPK1P53355 1430 aa27.81■■■□□ 2.04
SLC3A2-206ENST00000535296 TROQ12816 1431 aaPredicted RBP27.81■■■□□ 2.04
SLC3A2-206ENST00000535296 DENND4BO75064 1496 aaPredicted RBP27.79■■■□□ 2.04
SLC3A2-206ENST00000535296 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
SLC3A2-206ENST00000535296 ABCC5O15440 1437 aa27.78■■■□□ 2.04
SLC3A2-206ENST00000535296 TRIM52Q96A61 297 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms