RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
TMEM258-202ENST00000535042 ARHGEF11O15085 1522 aa21.7■■□□□ 1.07
TMEM258-202ENST00000535042 SHROOM2Q13796 1616 aa21.67■■□□□ 1.06
TMEM258-202ENST00000535042 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
TMEM258-202ENST00000535042 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
TMEM258-202ENST00000535042 KIF21BO75037 1637 aa21.66■■□□□ 1.06
TMEM258-202ENST00000535042 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
TMEM258-202ENST00000535042 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
TMEM258-202ENST00000535042 ERCC6L2Q5T890 1561 aa21.64■■□□□ 1.05
TMEM258-202ENST00000535042 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
TMEM258-202ENST00000535042 IQGAP2Q13576 1575 aa21.61■■□□□ 1.05
TMEM258-202ENST00000535042 GOLGA3Q08378 1498 aa21.58■■□□□ 1.05
TMEM258-202ENST00000535042 ARAP1Q96P48 1450 aa21.58■■□□□ 1.04
TMEM258-202ENST00000535042 CTTNBP2Q8WZ74 1663 aa21.56■■□□□ 1.04
TMEM258-202ENST00000535042 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
TMEM258-202ENST00000535042 CYB5RLQ6IPT4 315 aa21.54■■□□□ 1.04
TMEM258-202ENST00000535042 UGGT2Q9NYU1 1516 aa21.54■■□□□ 1.04
TMEM258-202ENST00000535042 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
TMEM258-202ENST00000535042 CARMIL2Q6F5E8 1435 aa21.47■■□□□ 1.03
TMEM258-202ENST00000535042 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
TMEM258-202ENST00000535042 KIAA0556O60303 1618 aa21.42■■□□□ 1.02
TMEM258-202ENST00000535042 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
TMEM258-202ENST00000535042 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
TMEM258-202ENST00000535042 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
TMEM258-202ENST00000535042 P3H3Q8IVL6 736 aa21.4■■□□□ 1.02
TMEM258-202ENST00000535042 PTPRGP23470 1445 aa21.39■■□□□ 1.02
TMEM258-202ENST00000535042 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
TMEM258-202ENST00000535042 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
TMEM258-202ENST00000535042 ARHGAP35Q9NRY4 1499 aa21.29■■□□□ 1
TMEM258-202ENST00000535042 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
TMEM258-202ENST00000535042 UACAQ9BZF9 1416 aa21.25■□□□□ 0.99
TMEM258-202ENST00000535042 ADCY10Q96PN6 1610 aa21.24■□□□□ 0.99
TMEM258-202ENST00000535042 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
TMEM258-202ENST00000535042 CLIP1P30622 1438 aa21.22■□□□□ 0.99
TMEM258-202ENST00000535042 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
TMEM258-202ENST00000535042 ABCA8O94911 1581 aa21.2■□□□□ 0.98
TMEM258-202ENST00000535042 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
TMEM258-202ENST00000535042 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
TMEM258-202ENST00000535042 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.97
TMEM258-202ENST00000535042 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
TMEM258-202ENST00000535042 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
TMEM258-202ENST00000535042 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
TMEM258-202ENST00000535042 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
TMEM258-202ENST00000535042 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
TMEM258-202ENST00000535042 ATP10BO94823 1461 aa21.06■□□□□ 0.96
TMEM258-202ENST00000535042 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
TMEM258-202ENST00000535042 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
TMEM258-202ENST00000535042 ASXL2Q76L83 1435 aa21.02■□□□□ 0.96
TMEM258-202ENST00000535042 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
TMEM258-202ENST00000535042 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
TMEM258-202ENST00000535042 CASKIN1Q8WXD9 1431 aa20.99■□□□□ 0.95
TMEM258-202ENST00000535042 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
TMEM258-202ENST00000535042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
TMEM258-202ENST00000535042 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
TMEM258-202ENST00000535042 CDK13Q14004 1512 aaKnown RBP20.95■□□□□ 0.94
TMEM258-202ENST00000535042 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
TMEM258-202ENST00000535042 ABCC10Q5T3U5 1492 aa20.94■□□□□ 0.94
TMEM258-202ENST00000535042 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
TMEM258-202ENST00000535042 FYCO1Q9BQS8 1478 aa20.93■□□□□ 0.94
TMEM258-202ENST00000535042 FAM69CQ0P6D2 419 aa20.92■□□□□ 0.94
TMEM258-202ENST00000535042 WDR7Q9Y4E6 1490 aa20.92■□□□□ 0.94
TMEM258-202ENST00000535042 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
TMEM258-202ENST00000535042 DIP2BQ9P265 1576 aa20.89■□□□□ 0.94
TMEM258-202ENST00000535042 KCNH8Q96L42 1107 aa20.89■□□□□ 0.93
TMEM258-202ENST00000535042 LRRIQ1Q96JM4 1722 aa20.88■□□□□ 0.93
TMEM258-202ENST00000535042 PLEKHD1A6NEE1 506 aa20.87■□□□□ 0.93
TMEM258-202ENST00000535042 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
TMEM258-202ENST00000535042 CCDC18Q5T9S5 1454 aa20.84■□□□□ 0.93
TMEM258-202ENST00000535042 GLI2P10070 1586 aa20.82■□□□□ 0.92
TMEM258-202ENST00000535042 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
TMEM258-202ENST00000535042 MAGI3Q5TCQ9 1506 aa20.78■□□□□ 0.92
TMEM258-202ENST00000535042 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
TMEM258-202ENST00000535042 MAP3K4Q9Y6R4 1608 aa20.73■□□□□ 0.91
TMEM258-202ENST00000535042 CD109Q6YHK3 1445 aa20.72■□□□□ 0.91
TMEM258-202ENST00000535042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
TMEM258-202ENST00000535042 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
TMEM258-202ENST00000535042 TIAM1Q13009 1591 aa20.7■□□□□ 0.9
TMEM258-202ENST00000535042 KIF14Q15058 1648 aa20.69■□□□□ 0.9
TMEM258-202ENST00000535042 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
TMEM258-202ENST00000535042 PPRC1Q5VV67 1664 aaKnown RBP20.67■□□□□ 0.9
TMEM258-202ENST00000535042 CFAP43Q8NDM7 1665 aa20.67■□□□□ 0.9
TMEM258-202ENST00000535042 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
TMEM258-202ENST00000535042 MAP3K1Q13233 1512 aa20.67■□□□□ 0.9
TMEM258-202ENST00000535042 TTC37Q6PGP7 1564 aa20.67■□□□□ 0.9
TMEM258-202ENST00000535042 TSPOAP1O95153 1857 aa20.67■□□□□ 0.9
TMEM258-202ENST00000535042 LRRC9Q6ZRR7 1453 aa20.63■□□□□ 0.89
TMEM258-202ENST00000535042 APLP2Q06481 763 aa20.63■□□□□ 0.89
TMEM258-202ENST00000535042 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
TMEM258-202ENST00000535042 TEX14Q8IWB6 1497 aa20.6■□□□□ 0.89
TMEM258-202ENST00000535042 PLCH2O75038 1416 aa20.6■□□□□ 0.89
TMEM258-202ENST00000535042 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
TMEM258-202ENST00000535042 NCOA2Q15596 1464 aa20.55■□□□□ 0.88
TMEM258-202ENST00000535042 GPATCH8Q9UKJ3 1502 aaKnown RBP20.54■□□□□ 0.88
TMEM258-202ENST00000535042 CCNB3Q8WWL7 1395 aa20.53■□□□□ 0.88
TMEM258-202ENST00000535042 FANCAO15360 1455 aa20.53■□□□□ 0.88
TMEM258-202ENST00000535042 NEO1Q92859 1461 aa20.52■□□□□ 0.88
TMEM258-202ENST00000535042 EFCAB2Q5VUJ9 269 aa20.52■□□□□ 0.88
TMEM258-202ENST00000535042 ARAP3Q8WWN8 1544 aa20.52■□□□□ 0.87
TMEM258-202ENST00000535042 MYO5CQ9NQX4 1742 aa20.51■□□□□ 0.87
TMEM258-202ENST00000535042 AKNAQ7Z591 1439 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms