RNA–Protein interactions for RNA: ENST00000534486.1

KDM2A-215, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-215ENST00000534486 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
KDM2A-215ENST00000534486 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
KDM2A-215ENST00000534486 CCER1Q8TC90 406 aaPredicted RBP9.58□□□□□ -0.88
KDM2A-215ENST00000534486 AKT1S1Q96B36 256 aa9.57□□□□□ -0.88
KDM2A-215ENST00000534486 EHMT2Q96KQ7 1210 aa9.57□□□□□ -0.88
KDM2A-215ENST00000534486 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
KDM2A-215ENST00000534486 TOP2BQ02880 1626 aa9.56□□□□□ -0.88
KDM2A-215ENST00000534486 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
KDM2A-215ENST00000534486 ERICH3Q5RHP9 1530 aa9.55□□□□□ -0.88
KDM2A-215ENST00000534486 CLIP1P30622 1438 aa9.54□□□□□ -0.88
KDM2A-215ENST00000534486 POTEHQ6S545 545 aa9.52□□□□□ -0.89
KDM2A-215ENST00000534486 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
KDM2A-215ENST00000534486 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
KDM2A-215ENST00000534486 PRXQ9BXM0 1461 aa9.5□□□□□ -0.89
KDM2A-215ENST00000534486 RAPGEF2Q9Y4G8 1499 aa9.5□□□□□ -0.89
KDM2A-215ENST00000534486 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
KDM2A-215ENST00000534486 SPDYE2BA6NHP3 402 aa9.48□□□□□ -0.89
KDM2A-215ENST00000534486 SPDYE6P0CI01 402 aa9.48□□□□□ -0.89
KDM2A-215ENST00000534486 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
KDM2A-215ENST00000534486 DIEXFQ68CQ4 756 aaKnown RBP9.48□□□□□ -0.89
KDM2A-215ENST00000534486 LAMC3Q9Y6N6 1575 aa9.48□□□□□ -0.89
KDM2A-215ENST00000534486 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
KDM2A-215ENST00000534486 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
KDM2A-215ENST00000534486 CUX2O14529 1486 aa9.45□□□□□ -0.9
KDM2A-215ENST00000534486 CENPBP07199 599 aaPredicted RBP9.44□□□□□ -0.9
KDM2A-215ENST00000534486 CHRDL2Q6WN34 429 aa9.44□□□□□ -0.9
KDM2A-215ENST00000534486 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
KDM2A-215ENST00000534486 ARAP1Q96P48 1450 aa9.44□□□□□ -0.9
KDM2A-215ENST00000534486 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
KDM2A-215ENST00000534486 PDS5BQ9NTI5 1447 aa9.41□□□□□ -0.9
KDM2A-215ENST00000534486 CUX1P39880 1505 aa9.41□□□□□ -0.9
KDM2A-215ENST00000534486 CFTRP13569 1480 aa9.4□□□□□ -0.9
KDM2A-215ENST00000534486 REM2Q8IYK8 340 aaPredicted RBP9.4□□□□□ -0.9
KDM2A-215ENST00000534486 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
KDM2A-215ENST00000534486 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
KDM2A-215ENST00000534486 KIF27Q86VH2 1401 aa9.37□□□□□ -0.91
KDM2A-215ENST00000534486 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
KDM2A-215ENST00000534486 ZNF692Q9BU19 519 aaPredicted RBP9.36□□□□□ -0.91
KDM2A-215ENST00000534486 NESP48681 1621 aa9.35□□□□□ -0.91
KDM2A-215ENST00000534486 PRDM2Q13029 1718 aa9.35□□□□□ -0.91
KDM2A-215ENST00000534486 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
KDM2A-215ENST00000534486 DHX57Q6P158 1386 aaKnown RBP9.34□□□□□ -0.91
KDM2A-215ENST00000534486 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
KDM2A-215ENST00000534486 TTBK1Q5TCY1 1321 aaPredicted RBP9.32□□□□□ -0.92
KDM2A-215ENST00000534486 GTF3C3Q9Y5Q9 886 aa9.32□□□□□ -0.92
KDM2A-215ENST00000534486 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
KDM2A-215ENST00000534486 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
KDM2A-215ENST00000534486 SPDYE1Q8NFV5 336 aaPredicted RBP9.3□□□□□ -0.92
KDM2A-215ENST00000534486 MRC2Q9UBG0 1479 aa9.29□□□□□ -0.92
KDM2A-215ENST00000534486 PITPNM1O00562 1244 aa9.28□□□□□ -0.92
KDM2A-215ENST00000534486 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
KDM2A-215ENST00000534486 WDR62O43379 1518 aa9.27□□□□□ -0.93
KDM2A-215ENST00000534486 FANCD2Q9BXW9 1451 aa9.27□□□□□ -0.93
KDM2A-215ENST00000534486 CCNB3Q8WWL7 1395 aa9.26□□□□□ -0.93
KDM2A-215ENST00000534486 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
KDM2A-215ENST00000534486 IGF1RP08069 1367 aa9.24□□□□□ -0.93
KDM2A-215ENST00000534486 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
KDM2A-215ENST00000534486 MIER1Q8N108 512 aa9.24□□□□□ -0.93
KDM2A-215ENST00000534486 CFAP43Q8NDM7 1665 aa9.23□□□□□ -0.93
KDM2A-215ENST00000534486 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
KDM2A-215ENST00000534486 MAPKBP1O60336 1514 aa9.21□□□□□ -0.93
KDM2A-215ENST00000534486 MYT1Q01538 1121 aa9.21□□□□□ -0.94
KDM2A-215ENST00000534486 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.945e-12■■□□□ 14.5
KDM2A-215ENST00000534486 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.94
KDM2A-215ENST00000534486 PIP4P2Q8N4L2 257 aa9.2□□□□□ -0.94
KDM2A-215ENST00000534486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.2□□□□□ -0.94
KDM2A-215ENST00000534486 FHAD1B1AJZ9 1412 aa9.2□□□□□ -0.94
KDM2A-215ENST00000534486 FGD5Q6ZNL6 1462 aa9.2□□□□□ -0.94
KDM2A-215ENST00000534486 EFCAB5A4FU69 1503 aa9.2□□□□□ -0.94
KDM2A-215ENST00000534486 FXR2P51116 673 aaKnown RBP eCLIP9.19□□□□□ -0.941e-7■■■□□ 16.1
KDM2A-215ENST00000534486 CARMIL1Q5VZK9 1371 aa9.18□□□□□ -0.94
KDM2A-215ENST00000534486 FYCO1Q9BQS8 1478 aa9.17□□□□□ -0.94
KDM2A-215ENST00000534486 DNMBPQ6XZF7 1577 aa9.16□□□□□ -0.94
KDM2A-215ENST00000534486 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
KDM2A-215ENST00000534486 PCF11O94913 1555 aaKnown RBP9.16□□□□□ -0.94
KDM2A-215ENST00000534486 RAB3GAP2Q9H2M9 1393 aa9.15□□□□□ -0.94
KDM2A-215ENST00000534486 CUL7Q14999 1698 aa9.15□□□□□ -0.94
KDM2A-215ENST00000534486 SETD5Q9C0A6 1442 aa9.14□□□□□ -0.95
KDM2A-215ENST00000534486 URB2Q14146 1524 aaKnown RBP9.14□□□□□ -0.95
KDM2A-215ENST00000534486 CASKIN1Q8WXD9 1431 aa9.14□□□□□ -0.95
KDM2A-215ENST00000534486 PHLDB1Q86UU1 1377 aa9.13□□□□□ -0.95
KDM2A-215ENST00000534486 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
KDM2A-215ENST00000534486 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
KDM2A-215ENST00000534486 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
KDM2A-215ENST00000534486 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
KDM2A-215ENST00000534486 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
KDM2A-215ENST00000534486 WDR97A6NE52 1622 aa9.11□□□□□ -0.95
KDM2A-215ENST00000534486 TOPBP1Q92547 1522 aa9.1□□□□□ -0.95
KDM2A-215ENST00000534486 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
KDM2A-215ENST00000534486 POLA1P09884 1462 aaPredicted RBP9.09□□□□□ -0.95
KDM2A-215ENST00000534486 SNAPC4Q5SXM2 1469 aa9.09□□□□□ -0.95
KDM2A-215ENST00000534486 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
KDM2A-215ENST00000534486 SAMD9Q5K651 1589 aa9.08□□□□□ -0.96
KDM2A-215ENST00000534486 CTTNBP2Q8WZ74 1663 aa9.08□□□□□ -0.96
KDM2A-215ENST00000534486 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
KDM2A-215ENST00000534486 FMN1Q68DA7 1419 aa9.07□□□□□ -0.96
KDM2A-215ENST00000534486 HAX1O00165 279 aa9.07□□□□□ -0.96
KDM2A-215ENST00000534486 ABCA5Q8WWZ7 1642 aa9.06□□□□□ -0.96
KDM2A-215ENST00000534486 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
KDM2A-215ENST00000534486 HFM1A2PYH4 1435 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms